iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013538

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02053007

Gene Name

ATXN3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000005786.5	ENSBTAT00000007611.5	ENSBTAP00000007611.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	4.40e-09	35.5	225	243
UBD/Alpha-Helix/UIM	9e-06	16.1	245	260
UBD/Alpha-Helix/UIM	8.2e-05	13.1	345	361

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEeee 19
           +++eeLq+AlalS+qE ++
   Q: 225  EDEEELQRALALSRQEIDM 243
           69**************886 PP

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqE 16
           dE+++L++A++lS+q 
   Q: 245  DEEADLRRAIQLSMQG 260
           7*************97 PP

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEe 17
           +E+++Lq A+++Sl+ +
   Q: 345  SEEDMLQAAVTMSLETV 361
           7*************986 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MESIFHEKQE GSLCAQHCLN NLLQGEYFSP VELSSIAHQL DEEERMRMAE GGVTSEDYRT 60
FLQQPSGNMD DSGFFSIQQV ISNALKVWGL ELILFNSPEY QRLRIDPINE RSFICNYKEH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGACAAATAA ACATGGAGTC CATCTTCCAC GAAAAAGTGA GTGTCCACGT TCGGTGGGGA 60
GCTGTCCACG GCGCGGTGGC GGGCGTGGGG CGCGGAAACG CCGCCTCCTG GGGAGCTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR033865--Ataxin-3
IPR006155--Josephin
IPR009068--S15_NS1_RNA-bd
IPR003903--UIM_dom

PROSITE

PS50957--JOSEPHIN
PS50330--UIM

Pfam

PF02099--Josephin
PF02809--UIM

SMART

SM01246--Josephin
SM00726--UIM

Gene Ontology

GO:0005759--C:mitochondrial matrix
GO:0031966--C:mitochondrial membrane
GO:0042405--C:nuclear inclusion body
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0034605--P:cellular response to heat
GO:0071218--P:cellular response to misfolded protein
GO:0035640--P:exploration behavior
GO:0006515--P:misfolded or incompletely synthesized protein catabolic process
GO:0035520--P:monoubiquitinated protein deubiquitination
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010810--P:regulation of cell-substrate adhesion

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002015	Ailuropoda melanoleuca	84.30	1.00e-174	605.00
IUUC-Atr-002735	Amborella trichopoda	50.00	2.00e-06	43.10
IUUC-Apl-003210	Anas platyrhynchos	72.80	3.00e-142	498.00
IUUC-Aca-005171	Anolis carolinensis	69.28	1.00e-123	436.00
IUUC-Aly-005625	Arabidopsis lyrata	44.38	2.00e-39	155.00
IUUC-Ath-007088	Arabidopsis thaliana	44.38	2.00e-39	155.00
IUUC-Afu-009069	Aspergillus fumigatus	32.00	2.50e-01	28.50
IUUC-Ame-010715	Astyanax mexicanus	71.11	3.00e-121	427.00
IUUC-Bdi-015000	Brachypodium distachyon	41.76	1.00e-34	140.00
IUUC-Bol-015894	Brassica oleracea	43.79	1.00e-39	157.00
IUUC-Bra-018020	Brassica rapa	44.05	8.00e-40	158.00
IUUC-Cel-018121	Caenorhabditis elegans	35.69	8.00e-42	164.00
IUUC-Cja-018840	Callithrix jacchus	83.56	7.00e-172	596.00
IUUC-Cfa-021035	Canis familiaris	85.95	2.00e-180	624.00
IUUC-Cpo-021776	Cavia porcellus	83.29	3.00e-169	587.00
IUUC-Csa-023257	Chlorocebus sabaeus	66.04	1.00e-131	462.00
IUUC-Cho-024878	Choloepus hoffmanni	82.60	3.00e-169	587.00
IUUC-Cme-027158	Cyanidioschyzon merolae	30.00	9.00e-12	63.50
IUUC-Dre-027506	Danio rerio	68.25	5.00e-89	320.00
IUUC-Dno-029172	Dasypus novemcinctus	83.24	6.00e-177	613.00
IUUC-Dor-030900	Dipodomys ordii	95.37	2.00e-144	504.00
IUUC-Ete-033000	Echinops telfairi	57.02	5.00e-87	314.00
IUUC-Eca-034338	Equus caballus	87.05	0.00e+00	631.00
IUUC-Eeu-034585	Erinaceus europaeus	98.10	3.00e-57	215.00
IUUC-Fca-035441	Felis catus	87.23	4.00e-69	253.00
IUUC-Fal-037525	Ficedula albicollis	71.78	1.00e-133	469.00
IUUC-Gmo-039718	Gadus morhua	71.86	3.00e-110	391.00
IUUC-Gga-040774	Gallus gallus	71.28	4.00e-147	514.00
IUUC-Gac-041671	Gasterosteus aculeatus	72.60	3.00e-107	381.00
IUUC-Gma-042801	Glycine max	41.07	5.00e-36	144.00
IUUC-Ggo-044759	Gorilla gorilla	80.58	5.00e-138	483.00
IUUC-Hsa-046591	Homo sapiens	81.54	7.00e-166	576.00
IUUC-Hvu-047492	Hordeum vulgare	42.94	3.00e-33	135.00
IUUC-Itr-048851	Ictidomys tridecemlineatus	72.37	1.00e-123	435.00
IUUC-Lch-049519	Latimeria chalumnae	74.71	3.00e-108	384.00
IUUC-Lpe-050819	Leersia perrieri	43.02	1.00e-34	140.00
IUUC-Loc-051816	Lepisosteus oculatus	74.34	2.00e-127	448.00
IUUC-Laf-053784	Loxodonta africana	82.48	3.00e-175	607.00
IUUC-Mcc-055283	Macaca mulatta	84.80	2.00e-180	625.00
IUUC-Meu-056589	Macropus eugenii	74.05	9.00e-147	512.00
IUUC-Mtr-058233	Medicago truncatula	41.67	1.00e-35	143.00
IUUC-Mla-059013	Melampsora laricipopulina	39.70	9.00e-30	124.00
IUUC-Mga-059301	Meleagris gallopavo	71.28	9.00e-150	522.00
IUUC-Mmr-061038	Microcebus murinus	86.25	0.00e+00	628.00
IUUC-Mdo-062927	Monodelphis domestica	78.98	8.00e-151	526.00
IUUC-Mmu-063600	Mus musculus	77.96	1.00e-156	545.00
IUUC-Mpu-065897	Mustela putorius furo	93.06	5.00e-159	553.00
IUUC-Mlu-067543	Myotis lucifugus	91.81	5.00e-159	553.00
IUUC-Nle-069847	Nomascus leucogenys	80.59	4.00e-164	570.00
IUUC-Opr-070550	Ochotona princeps	75.76	2.00e-150	525.00
IUUC-Ont-071723	Oreochromis niloticus	68.91	1.00e-109	389.00
IUUC-Oan-073569	Ornithorhynchus anatinus	79.10	9.00e-160	556.00
IUUC-Ocu-074632	Oryctolagus cuniculus	82.42	2.00e-172	598.00
IUUC-Oba-075288	Oryza barthii	43.02	8.00e-37	147.00
IUUC-Obr-076050	Oryza brachyantha	42.44	1.00e-32	134.00
IUUC-Ogl-077174	Oryza glaberrima	43.02	8.00e-37	147.00
IUUC-Ogu-078006	Oryza glumaepatula	43.02	9.00e-37	147.00
IUUC-Oin-079278	Oryza indica	40.88	6.00e-36	144.00
IUUC-Olo-080941	Oryza longistaminata	43.02	8.00e-37	147.00
IUUC-Ome-081172	Oryza meridionalis	43.02	9.00e-37	147.00
IUUC-Oni-082239	Oryza nivara	43.02	7.00e-37	147.00
IUUC-Opu-083939	Oryza punctata	42.44	4.00e-36	145.00
IUUC-Oru-084393	Oryza rufipogon	43.02	8.00e-37	147.00
IUUC-Osa-086080	Oryza sativa	43.02	8.00e-37	147.00
IUUC-Ola-087566	Oryzias latipes	73.29	2.00e-111	395.00
IUUC-Oga-088617	Otolemur garnettii	71.26	1.00e-129	455.00
IUUC-Oar-090052	Ovis aries	96.73	0.00e+00	704.00
IUUC-Ptr-091435	Pan troglodytes	84.84	0.00e+00	627.00
IUUC-Pan-092742	Papio anubis	65.77	2.00e-130	458.00
IUUC-Psi-093313	Pelodiscus sinensis	89.51	1.00e-131	462.00
IUUC-Pma-094374	Petromyzon marinus	60.53	3.00e-83	301.00
IUUC-Pno-095003	Phaeosphaeria nodorum	34.52	6.50e-02	33.10
IUUC-Ppa-095601	Physcomitrella patens	44.38	2.00e-43	169.00
IUUC-Pfo-097327	Poecilia formosa	71.24	7.00e-112	396.00
IUUC-Pab-098611	Pongo abelii	81.48	7.00e-147	513.00
IUUC-Pca-101022	Procavia capensis	98.23	4.00e-64	238.00
IUUC-Ppe-101545	Prunus persica	43.20	2.00e-37	149.00
IUUC-Pva-102844	Pteropus vampyrus	87.06	0.00e+00	626.00
IUUC-Rno-104896	Rattus norvegicus	77.96	2.00e-163	568.00
IUUC-Sha-107106	Sarcophilus harrisii	80.47	6.00e-167	579.00
IUUC-Sit-110477	Setaria italica	43.60	4.00e-36	145.00
IUUC-Sly-111416	Solanum lycopersicum	39.13	4.00e-18	84.30
IUUC-Stu-112227	Solanum tuberosum	39.39	6.00e-21	93.60
IUUC-Sar-113534	Sorex araneus	76.80	2.00e-148	518.00
IUUC-Sbi-114751	Sorghum bicolor	42.53	1.00e-34	140.00
IUUC-Ssc-115274	Sus scrofa	87.06	0.00e+00	639.00
IUUC-Tgu-117426	Taeniopygia guttata	74.37	1.00e-143	502.00
IUUC-Tru-118059	Takifugu rubripes	73.94	2.00e-108	385.00
IUUC-Tsy-119448	Tarsius syrichta	83.25	5.00e-87	314.00
IUUC-Tni-120681	Tetraodon nigroviridis	88.46	1.00e-60	224.00
IUUC-Tca-121442	Theobroma cacao	36.78	2.00e-39	155.00
IUUC-Tae-123969	Triticum aestivum	41.86	2.00e-31	129.00
IUUC-Tbe-127638	Tupaia belangeri	79.40	7.00e-159	553.00
IUUC-Ttr-129288	Tursiops truncatus	80.59	6.00e-160	556.00
IUUC-Uma-129359	Ustilago maydis	38.02	4.00e-33	136.00
IUUC-Vpa-130788	Vicugna pacos	87.88	2.00e-179	621.00
IUUC-Vvi-131227	Vitis vinifera	42.26	9.00e-35	140.00
IUUC-Xtr-132147	Xenopus tropicalis	66.40	4.00e-127	447.00
IUUC-Xma-133144	Xiphophorus maculatus	70.43	4.00e-108	384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence