iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	32.60	1.00e-70	265.00	IUUC-Hsa-045749

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MSLLAYGEPA ESSETDSPAA EAEPDVLVDF TAMLQRQRQN GDYGGWFGCD SKMQTTQSDQ 60
GYYLEQYVLG VLDFSSQYGI DYSISYTAAN VIGRPTKFPA YGDYPETFPM RTYGDWWQRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTATTGTTT TTGTCATTTA AACCAAGCAA GCCAAAAGTT TTTTGTTTTT GTTTTGGCAC 60
AGAAATTTGC TGAATAACCG CGAATCCTCG AGAGAATTGC CACCCAAGCG CGACACACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00367--LRR_CC

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0016059--P:deactivation of rhodopsin mediated signaling
GO:0016567--P:protein ubiquitination
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

dme:Dmel_CG1839

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001706	Ailuropoda melanoleuca	32.43	8.00e-74	270.00
IUUC-Apl-004115	Anas platyrhynchos	33.78	6.00e-78	284.00
IUUC-Aca-004482	Anolis carolinensis	33.84	5.00e-76	278.00
IUUC-Ame-010656	Astyanax mexicanus	34.56	2.00e-78	285.00
IUUC-Bta-013498	Bos taurus	38.67	9.00e-28	117.00
IUUC-Cja-019838	Callithrix jacchus	35.00	6.00e-47	181.00
IUUC-Cfa-020456	Canis familiaris	32.60	1.00e-75	276.00
IUUC-Csa-024014	Chlorocebus sabaeus	35.00	2.00e-46	179.00
IUUC-Cho-024333	Choloepus hoffmanni	35.83	2.00e-32	133.00
IUUC-Cin-025800	Ciona intestinalis	32.29	4.00e-33	135.00
IUUC-Csv-026119	Ciona savignyi	29.09	8.00e-35	140.00
IUUC-Dre-027364	Danio rerio	33.44	2.00e-82	298.00
IUUC-Dno-029258	Dasypus novemcinctus	35.00	7.00e-46	177.00
IUUC-Dor-030963	Dipodomys ordii	40.45	1.00e-29	123.00
IUUC-Ete-032619	Echinops telfairi	32.50	2.00e-40	159.00
IUUC-Eca-033869	Equus caballus	32.72	5.00e-74	271.00
IUUC-Eeu-034752	Erinaceus europaeus	30.77	8.00e-36	144.00
IUUC-Fca-036554	Felis catus	31.31	2.00e-74	272.00
IUUC-Fal-036695	Ficedula albicollis	32.81	1.00e-77	283.00
IUUC-Gmo-039192	Gadus morhua	37.54	2.00e-43	169.00
IUUC-Gga-040713	Gallus gallus	32.81	6.00e-78	284.00
IUUC-Gac-041952	Gasterosteus aculeatus	38.71	2.00e-45	176.00
IUUC-Ggo-044425	Gorilla gorilla	32.26	7.00e-75	274.00
IUUC-Hsa-045749	Homo sapiens	32.60	1.00e-74	273.00
IUUC-Itr-047877	Ictidomys tridecemlineatus	30.42	8.00e-36	143.00
IUUC-Lch-049424	Latimeria chalumnae	32.64	3.00e-76	278.00
IUUC-Loc-052577	Lepisosteus oculatus	32.15	1.00e-75	276.00
IUUC-Laf-054305	Loxodonta africana	35.31	2.00e-47	182.00
IUUC-Mcc-055258	Macaca mulatta	28.53	2.00e-31	130.00
IUUC-Meu-056888	Macropus eugenii	30.72	2.00e-52	198.00
IUUC-Mla-059064	Melampsora laricipopulina	26.16	3.00e-09	56.20
IUUC-Mga-059700	Meleagris gallopavo	33.12	4.00e-78	285.00
IUUC-Mmr-061712	Microcebus murinus	33.75	4.00e-41	162.00
IUUC-Mdo-062098	Monodelphis domestica	32.55	2.00e-74	272.00
IUUC-Mmu-063505	Mus musculus	35.00	6.00e-47	181.00
IUUC-Mpu-066263	Mustela putorius furo	32.32	1.00e-74	273.00
IUUC-Mlu-067327	Myotis lucifugus	35.00	7.00e-46	177.00
IUUC-Nle-069478	Nomascus leucogenys	35.19	3.00e-41	162.00
IUUC-Opr-070497	Ochotona princeps	46.67	6.00e-20	91.30
IUUC-Ont-071391	Oreochromis niloticus	38.12	4.00e-48	185.00
IUUC-Oan-073721	Ornithorhynchus anatinus	32.94	3.00e-73	268.00
IUUC-Ocu-073821	Oryctolagus cuniculus	31.78	1.00e-70	259.00
IUUC-Ola-087182	Oryzias latipes	33.18	3.00e-69	255.00
IUUC-Oga-088018	Otolemur garnettii	34.69	3.00e-47	182.00
IUUC-Oar-090339	Ovis aries	35.59	8.00e-47	181.00
IUUC-Ptr-090776	Pan troglodytes	32.26	3.00e-74	271.00
IUUC-Pan-092203	Papio anubis	35.00	1.00e-46	180.00
IUUC-Psi-093022	Pelodiscus sinensis	35.94	4.00e-49	188.00
IUUC-Pfo-097500	Poecilia formosa	37.94	1.00e-53	203.00
IUUC-Pab-097943	Pongo abelii	34.38	3.00e-45	175.00
IUUC-Pca-100898	Procavia capensis	35.88	7.00e-43	167.00
IUUC-Pva-102663	Pteropus vampyrus	35.00	1.00e-46	180.00
IUUC-Rno-105570	Rattus norvegicus	33.05	2.00e-75	275.00
IUUC-Sha-106688	Sarcophilus harrisii	36.25	4.00e-49	188.00
IUUC-Sar-113608	Sorex araneus	35.00	7.00e-47	181.00
IUUC-Ssc-115444	Sus scrofa	35.00	3.00e-46	179.00
IUUC-Tgu-117129	Taeniopygia guttata	36.54	8.00e-47	179.00
IUUC-Tru-118101	Takifugu rubripes	38.01	6.00e-43	167.00
IUUC-Tsy-119589	Tarsius syrichta	32.84	3.00e-75	275.00
IUUC-Tni-120420	Tetraodon nigroviridis	37.54	2.00e-47	183.00
IUUC-Tbe-128069	Tupaia belangeri	35.90	4.00e-32	132.00
IUUC-Ttr-128566	Tursiops truncatus	28.66	1.00e-59	223.00
IUUC-Vpa-130059	Vicugna pacos	35.00	1.00e-46	179.00
IUUC-Xtr-132488	Xenopus tropicalis	37.50	2.00e-31	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence