iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099512

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_750033; POPTR_0016s14320g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s14320	POPTR_0016s14320.1	POPTR_0016s14320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	33.2	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f   ++ ++vlp C+H fh  C+  w         + +CP Cr
   Q: 110  CPICLGEFvdgEK-VRVLPkCNHGFHVRCIDTW------LLSHSSCPNCR 152
           ********77444.*******************......888999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVNMHRRMLD TVPLDVAPAN GNRTHDSYIN ETNFDTNMVI ILAALLCALI GALGLNSIVR 60
CLLRCSSRFA LETTEEAAAR LAATGLKKRD LRQIPVAIYG AGGSISATEC PICLGEFVDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTGGTACT TGAGTAAGCT TTAAGTTAGA GTAGTGCTTG ATAATCATGA TTAGGTAGGC 60
AAAGTTGCTA CAATTATAGC TTACTTTTTT CCCTTAATTT TTTTTGTATC TTAGCATAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0016s14320g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000754	Aegilops tauschii	64.38	9.00e-26	107.00
IUUC-Aly-006386	Arabidopsis lyrata	64.23	4.00e-34	137.00
IUUC-Ame-011764	Astyanax mexicanus	34.31	5.00e-13	69.70
IUUC-Bol-015294	Brassica oleracea	59.41	2.00e-37	147.00
IUUC-Bra-016992	Brassica rapa	60.59	1.00e-38	151.00
IUUC-Cja-019504	Callithrix jacchus	37.62	1.00e-14	74.70
IUUC-Cpo-021725	Cavia porcellus	32.08	5.00e-15	76.30
IUUC-Cho-024867	Choloepus hoffmanni	36.45	2.00e-14	73.90
IUUC-Dno-029370	Dasypus novemcinctus	37.38	9.00e-15	75.10
IUUC-Dor-030816	Dipodomys ordii	50.91	1.00e-14	75.10
IUUC-Dme-032121	Drosophila melanogaster	47.54	8.00e-12	62.00
IUUC-Ete-033060	Echinops telfairi	40.00	1.00e-14	75.10
IUUC-Fal-037147	Ficedula albicollis	35.64	4.00e-14	73.20
IUUC-Gga-041243	Gallus gallus	38.30	3.00e-14	73.60
IUUC-Hvu-047249	Hordeum vulgare	53.10	5.00e-28	115.00
IUUC-Itr-048470	Ictidomys tridecemlineatus	37.00	2.00e-14	73.90
IUUC-Lpe-050757	Leersia perrieri	57.42	9.00e-30	122.00
IUUC-Meu-056263	Macropus eugenii	35.25	1.00e-15	78.20
IUUC-Mga-059706	Meleagris gallopavo	37.89	2.00e-14	73.90
IUUC-Mdo-062651	Monodelphis domestica	36.07	1.00e-16	81.30
IUUC-Mmu-064339	Mus musculus	36.63	2.00e-15	77.80
IUUC-Mac-064889	Musa acuminata	67.06	5.00e-51	192.00
IUUC-Opr-070218	Ochotona princeps	34.13	1.00e-14	75.10
IUUC-Oan-073718	Ornithorhynchus anatinus	39.36	2.00e-16	80.90
IUUC-Ocu-073847	Oryctolagus cuniculus	40.00	7.00e-13	68.90
IUUC-Opu-083472	Oryza punctata	57.14	2.00e-31	127.00
IUUC-Ola-087358	Oryzias latipes	44.93	2.00e-13	70.90
IUUC-Psi-093301	Pelodiscus sinensis	37.89	2.00e-14	73.90
IUUC-Pfo-096917	Poecilia formosa	36.75	3.00e-15	76.60
IUUC-Pyt-104590	Pyrenophora triticirepentis	52.38	3.00e-11	62.80
IUUC-Sha-106507	Sarcophilus harrisii	41.38	6.00e-14	72.40
IUUC-Sar-113182	Sorex araneus	36.63	6.00e-14	72.40
IUUC-Sbi-114132	Sorghum bicolor	60.16	5.00e-21	93.60
IUUC-Ssc-116087	Sus scrofa	36.63	2.00e-15	74.70
IUUC-Tru-118502	Takifugu rubripes	53.19	1.00e-12	68.20
IUUC-Tni-120344	Tetraodon nigroviridis	44.16	7.00e-15	75.10
IUUC-Tca-121477	Theobroma cacao	77.14	9.00e-69	252.00
IUUC-Tae-122886	Triticum aestivum	60.00	3.00e-32	130.00
IUUC-Tur-126629	Triticum urartu	65.43	4.00e-29	119.00
IUUC-Vvi-131731	Vitis vinifera	71.35	1.00e-56	211.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence