iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042757

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000837

Gene Name

ATL43; LOC100794083; GLYMA_04G091400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G09690	GLYMA04G09690.2	GLYMA04G09690.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-07	32.5	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f   + +++lp C+H+fh +C+  w         + +CPlCr
   Q: 118  CAVCLNKFeaAEVLRLLPkCKHAFHVECVDTW------LDAHSTCPLCR 160
           ********6544488888**************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MLMPPSSFTL LLTLLLLFLT YEAESGETPP PTPPPPFRPG IAVLVCVLTT IISLTSLLLL 60
YIKHCNGGIP DGGGGNSAPW TVAPFSGRKN SGIDRSVVES LPVFRFGALR GQKEGLDCAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCATGC CACCTTCTTC CTTCACCCTC CTCCTCACTC TCCTTCTATT ATTCCTTACA 60
TATGAAGCAG AGAGCGGAGA AACTCCACCC CCTACTCCCC CGCCGCCGTT CAGACCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

gmx:100794083

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002180	Ailuropoda melanoleuca	47.22	1.00e-15	77.80
IUUC-Atr-003122	Amborella trichopoda	46.49	1.00e-52	200.00
IUUC-Apl-003246	Anas platyrhynchos	45.83	4.00e-15	76.30
IUUC-Aly-006151	Arabidopsis lyrata	48.46	3.00e-62	232.00
IUUC-Ath-007131	Arabidopsis thaliana	49.38	8.00e-62	230.00
IUUC-Bta-012954	Bos taurus	47.22	1.00e-15	77.40
IUUC-Bdi-014982	Brachypodium distachyon	64.89	2.00e-37	149.00
IUUC-Bol-015760	Brassica oleracea	47.21	4.00e-56	211.00
IUUC-Bra-017357	Brassica rapa	48.16	2.00e-55	209.00
IUUC-Cja-018848	Callithrix jacchus	45.83	4.00e-15	76.30
IUUC-Cfa-020959	Canis familiaris	47.22	9.00e-16	78.20
IUUC-Cpo-022130	Cavia porcellus	48.61	3.00e-16	79.30
IUUC-Cho-024540	Choloepus hoffmanni	45.83	3.00e-15	76.60
IUUC-Dor-030261	Dipodomys ordii	45.83	2.00e-15	77.00
IUUC-Eca-034105	Equus caballus	47.22	1.00e-15	77.80
IUUC-Fca-036360	Felis catus	47.22	7.00e-16	78.60
IUUC-Fal-037494	Ficedula albicollis	47.22	9.00e-16	78.20
IUUC-Gmo-039153	Gadus morhua	46.38	1.00e-14	74.30
IUUC-Gga-040521	Gallus gallus	47.22	9.00e-16	78.20
IUUC-Ggo-044732	Gorilla gorilla	47.22	1.00e-15	77.80
IUUC-Hsa-046830	Homo sapiens	47.22	9.00e-16	77.80
IUUC-Hvu-047245	Hordeum vulgare	62.40	4.00e-35	142.00
IUUC-Itr-048694	Ictidomys tridecemlineatus	47.22	6.00e-16	78.60
IUUC-Laf-053419	Loxodonta africana	47.22	7.00e-16	78.20
IUUC-Meu-056404	Macropus eugenii	47.22	8.00e-16	78.20
IUUC-Mtr-057973	Medicago truncatula	52.06	2.00e-68	253.00
IUUC-Mga-059597	Meleagris gallopavo	44.44	8.00e-14	71.60
IUUC-Mdo-062309	Monodelphis domestica	47.22	8.00e-16	77.80
IUUC-Mac-065035	Musa acuminata	42.61	1.00e-45	177.00
IUUC-Mpu-066508	Mustela putorius furo	47.22	9.00e-16	78.20
IUUC-Mlu-068210	Myotis lucifugus	47.22	5.00e-16	79.00
IUUC-Opr-071167	Ochotona princeps	47.22	9.00e-16	77.40
IUUC-Oan-073236	Ornithorhynchus anatinus	45.83	3.00e-15	76.30
IUUC-Oba-075267	Oryza barthii	63.36	1.00e-37	150.00
IUUC-Ogl-077528	Oryza glaberrima	63.36	1.00e-37	150.00
IUUC-Ogu-078754	Oryza glumaepatula	63.36	1.00e-37	150.00
IUUC-Oin-079781	Oryza indica	63.36	1.00e-37	150.00
IUUC-Ome-081863	Oryza meridionalis	63.36	1.00e-37	150.00
IUUC-Oni-082943	Oryza nivara	63.36	1.00e-37	150.00
IUUC-Opu-083466	Oryza punctata	63.36	1.00e-37	150.00
IUUC-Oru-084675	Oryza rufipogon	63.36	1.00e-37	150.00
IUUC-Osa-085804	Oryza sativa	63.36	2.00e-37	149.00
IUUC-Ola-086904	Oryzias latipes	45.83	3.00e-15	76.30
IUUC-Oga-087987	Otolemur garnettii	47.22	1.00e-15	77.80
IUUC-Oar-089245	Ovis aries	46.58	3.00e-16	79.30
IUUC-Ptr-091155	Pan troglodytes	47.22	9.00e-16	78.20
IUUC-Ppa-095281	Physcomitrella patens	37.46	5.00e-36	145.00
IUUC-Pab-098133	Pongo abelii	47.22	1.00e-15	77.00
IUUC-Pop-099148	Populus trichocarpa	48.26	6.00e-57	214.00
IUUC-Pca-100961	Procavia capensis	47.22	1.00e-15	77.40
IUUC-Ppe-102095	Prunus persica	59.04	6.00e-71	261.00
IUUC-Pva-102987	Pteropus vampyrus	47.22	5.00e-16	79.00
IUUC-Sha-107023	Sarcophilus harrisii	47.22	1.00e-15	77.80
IUUC-Sit-109970	Setaria italica	41.69	4.00e-42	165.00
IUUC-Sly-111677	Solanum lycopersicum	48.14	2.00e-51	196.00
IUUC-Stu-112327	Solanum tuberosum	46.10	1.00e-49	190.00
IUUC-Sbi-114529	Sorghum bicolor	42.72	1.00e-44	173.00
IUUC-Ssc-115578	Sus scrofa	47.22	1.00e-15	77.80
IUUC-Tgu-117430	Taeniopygia guttata	47.22	1.00e-15	77.80
IUUC-Tru-118277	Takifugu rubripes	46.38	8.00e-15	75.10
IUUC-Tae-124580	Triticum aestivum	62.50	2.00e-36	146.00
IUUC-Ttr-128179	Tursiops truncatus	47.22	1.00e-15	77.80
IUUC-Vvi-131553	Vitis vinifera	56.90	3.00e-66	245.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence