iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012683

UUCD1 version

UUC-BoT-00089

Ensembl Protein ID

ENSBTAP00000020449.3

UniProt Accession

A6QQY0; F1MIJ2; A6QQY0_BOVIN

Genbank Protein ID

AAI50038.1

Protein Name

RAB40B protein

Genbank Nucleotide ID

DAAA02049365

Gene Name

RAB40B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000015387.3	ENSBTAT00000020449.3	ENSBTAP00000020449.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	8.40e-14	51.3	183	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           lw ++s++ SLq+LC++a+++c++ + l   d+LPLP +L+++L+++++
   Q: 183  LW-RPSKVLSLQDLCCRAVVSCTPAHLL---DRLPLPTALRSHLKSFSM 227
           67.99***********************...***************976 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MSTGGSPVRA YDFLLKFLLV GDSDVGKGEI LASLQDGAAE SPYGHPAGID YKTTTILLDG 60
RRVKLQLWDT SGQGRFCTIF RSYSRGAQGV ILVYDIANRW SFDGIDRWIK EINEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGCTGTC AGGCTGCTGG GACCGCCGGG CTCGCAGTGC TCCAGGGACC TCTGGACCCG 60
CGCGGCGCTG GACTGCCAGG CCACCGCCTC TGTGCTGTCC CGTGGGCTGG GCATGGGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005768--C:endosome
GO:0005886--C:plasma membrane
GO:0008021--C:synaptic vesicle
GO:0005525--F:GTP binding
GO:0072659--P:protein localization to plasma membrane
GO:0009306--P:protein secretion
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction
GO:0006904--P:vesicle docking involved in exocytosis

KEGG

bta:534237

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003206	Anas platyrhynchos	84.98	2.00e-120	424.00
IUUC-Aca-005004	Anolis carolinensis	82.16	7.00e-130	456.00
IUUC-Ame-011456	Astyanax mexicanus	80.22	6.00e-136	476.00
IUUC-Cja-018870	Callithrix jacchus	81.29	3.00e-132	464.00
IUUC-Cfa-020527	Canis familiaris	87.14	2.00e-108	385.00
IUUC-Cpo-021644	Cavia porcellus	89.55	2.00e-141	494.00
IUUC-Csa-023150	Chlorocebus sabaeus	89.93	1.00e-149	521.00
IUUC-Cho-024716	Choloepus hoffmanni	81.71	8.00e-79	285.00
IUUC-Dre-028614	Danio rerio	79.21	5.00e-133	466.00
IUUC-Eca-033492	Equus caballus	87.93	1.00e-123	435.00
IUUC-Fca-035705	Felis catus	88.74	9.00e-123	432.00
IUUC-Gga-040925	Gallus gallus	85.25	8.00e-144	502.00
IUUC-Ggo-045012	Gorilla gorilla	80.94	1.00e-132	465.00
IUUC-Hsa-046747	Homo sapiens	89.57	8.00e-149	519.00
IUUC-Loc-052325	Lepisosteus oculatus	83.51	2.00e-140	491.00
IUUC-Laf-053340	Loxodonta africana	87.41	7.00e-145	506.00
IUUC-Mcc-054711	Macaca mulatta	87.54	1.00e-145	508.00
IUUC-Mga-059204	Meleagris gallopavo	85.25	1.00e-143	501.00
IUUC-Mmu-064144	Mus musculus	88.13	1.00e-147	514.00
IUUC-Mpu-066352	Mustela putorius furo	88.31	5.00e-122	429.00
IUUC-Nle-070096	Nomascus leucogenys	88.85	3.00e-147	513.00
IUUC-Opr-070662	Ochotona princeps	85.97	3.00e-141	493.00
IUUC-Ocu-074559	Oryctolagus cuniculus	88.49	2.00e-136	478.00
IUUC-Olo-080270	Oryza longistaminata	34.41	3.00e-12	66.20
IUUC-Oga-088133	Otolemur garnettii	88.13	4.00e-147	513.00
IUUC-Oar-089702	Ovis aries	98.26	2.00e-134	471.00
IUUC-Ptr-090544	Pan troglodytes	92.25	4.00e-141	494.00
IUUC-Pan-092812	Papio anubis	89.93	1.00e-149	521.00
IUUC-Psi-093120	Pelodiscus sinensis	84.53	6.00e-143	499.00
IUUC-Pab-098735	Pongo abelii	89.93	1.00e-149	521.00
IUUC-Pva-102361	Pteropus vampyrus	90.00	7.00e-135	473.00
IUUC-Rno-105063	Rattus norvegicus	88.85	4.00e-148	516.00
IUUC-Sar-113518	Sorex araneus	83.59	3.00e-123	434.00
IUUC-Ssc-115719	Sus scrofa	88.85	3.00e-140	491.00
IUUC-Tsy-119011	Tarsius syrichta	86.84	1.00e-98	351.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence