• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007466
Ensembl Protein ID AT2G01470.1
UniProt Accession Q39221; Q7EP29; Q8VZ72; STLP2_ARATH
Genbank Protein ID AAA32871.1; AAC67323.1; AEC05458.1; AAL38374.1; AAL67028.1; AAM67563.1
Protein Name SEC12-like protein 2
Genbank Nucleotide ID M95796; AC005560; CP002685; AY065198; AY074332; AY123030
Gene Name STL2P; ST12P; At2g01470; F2I9.9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G01470 AT2G01470.1 AT2G01470.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexMentha
Post-translational Modifications (PTMs)
dbPPTdbPTMUniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.60e-07 31.2 159 182
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 9    laf.sd.tllvsGsdDgtikvWDl 30
           laf ++   l++G+ Dgt++v+ +
   Q: 159  LAFnPEgSVLAAGAEDGTLRVFKW 182
           7888777889***********997 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Required for the formation or budding of transport vesicles from the ER.
 Required for the formation or budding of transport vesicles from the ER.
Protein Sequence
(Fasta)
MANQSTETNQ PSNMQTYGVP IYAADWIPEV DVRSKIIMDP EKSEDDDESS SSSSSSRSCI 60
VLSGGGGEGR SGISNVILIC RVDLNTNSLS EQPLGRLVVG SDLPYRMAVH PREGGLICAL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007466|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGGGACTTGG CATTGAGCTC GAGAGACAGA CACGGAGGAT GGCGAATCAG AGTACAGAGA 60
CGAATCAACC GTCGAATATG CAGACTTACG GTGTACCGAT TTACGCCGCC GACTGGATTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007466|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0597--Phosphoprotein
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0735--Signal-anchor
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0005794--C:Golgi apparatus
GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0016020--C:membrane
GO:0005886--C:plasma membrane
GO:0005774--C:vacuolar membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating
KEGG ath:AT2G01470
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005479 Arabidopsis lyrata 91.69 0.00e+00 643.00
IUUC-Bta-012386 Bos taurus 26.97 3.00e-13 69.30
IUUC-Bdi-014110 Brachypodium distachyon 42.74 5.00e-68 250.00
IUUC-Bra-016660 Brassica rapa 75.63 3.00e-148 517.00
IUUC-Cin-025431 Ciona intestinalis 28.21 3.00e-12 65.50
IUUC-Ggo-044648 Gorilla gorilla 27.00 3.00e-12 65.90
IUUC-Hsa-046003 Homo sapiens 27.00 3.00e-12 65.90
IUUC-Lpe-051586 Leersia perrieri 43.48 1.00e-69 256.00
IUUC-Mvi-060443 Microbotryum violaceum 33.02 1.00e-09 57.40
IUUC-Mac-064955 Musa acuminata 47.58 2.00e-83 302.00
IUUC-Opr-070864 Ochotona princeps 26.86 1.00e-12 67.00
IUUC-Ont-072204 Oreochromis niloticus 27.27 2.00e-13 69.70
IUUC-Ocu-074217 Oryctolagus cuniculus 27.31 6.00e-12 64.70
IUUC-Obr-076826 Oryza brachyantha 44.76 5.00e-72 264.00
IUUC-Ogl-077927 Oryza glaberrima 46.57 2.00e-66 245.00
IUUC-Ogu-078241 Oryza glumaepatula 46.57 4.00e-66 244.00
IUUC-Oin-080217 Oryza indica 48.51 1.00e-66 246.00
IUUC-Olo-081060 Oryza longistaminata 46.69 1.00e-54 206.00
IUUC-Oni-082827 Oryza nivara 48.51 1.00e-66 246.00
IUUC-Opu-083159 Oryza punctata 42.63 1.00e-69 256.00
IUUC-Oru-085039 Oryza rufipogon 48.51 1.00e-66 246.00
IUUC-Osa-086258 Oryza sativa 48.51 1.00e-66 246.00
IUUC-Ola-087223 Oryzias latipes 25.95 1.00e-14 73.90
IUUC-Oar-090435 Ovis aries 26.97 2.00e-13 69.30
IUUC-Ptr-090869 Pan troglodytes 25.93 1.00e-07 50.40
IUUC-Ppa-095329 Physcomitrella patens 38.46 3.00e-48 185.00
IUUC-Pfo-097488 Poecilia formosa 25.74 8.00e-12 64.30
IUUC-Pop-099618 Populus trichocarpa 51.40 4.00e-99 353.00
IUUC-Ppe-101864 Prunus persica 55.72 1.00e-86 312.00
IUUC-Smo-109265 Selaginella moellendorffii 38.81 2.00e-48 185.00
IUUC-Sly-111551 Solanum lycopersicum 52.08 9.00e-82 296.00
IUUC-Stu-112264 Solanum tuberosum 51.93 1.00e-80 292.00
IUUC-Sre-115183 Sporisorium reilianum 19.12 1.00e-08 53.90
IUUC-Tru-117866 Takifugu rubripes 27.08 2.00e-13 69.30
IUUC-Tca-121083 Theobroma cacao 55.04 1.00e-104 372.00
IUUC-Tae-124218 Triticum aestivum 47.49 6.00e-69 253.00
IUUC-Ttr-128585 Tursiops truncatus 27.04 1.00e-13 70.10
IUUC-Uma-129598 Ustilago maydis 18.67 4.00e-11 62.40
IUUC-Vvi-131024 Vitis vinifera 51.67 5.00e-97 347.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved