iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095904

Ensembl Protein ID

PP1S5_152V6.2

UniProt Accession

A9RET9; A9RET9_PHYPA

Genbank Protein ID

EDQ82471.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544894

Gene Name

PHYPADRAFT_112962

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S5_152V6	PP1S5_152V6.2	PP1S5_152V6.2
PP1S5_152V6	PP1S5_152V6.1	PP1S5_152V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-07	31.6	130	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDl 30
           +c++f  d  ll++G+ Dg ++++ +
   Q: 130  NCICFsGDgSLLATGGKDGHLRIFAW 155
           7****96669*************976 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MNGQRRVKYT RPTTRNEDSG AVCGAWAPRA GSVTDSPSAL VLLGRDDEEW SKAITLREYN 60
FDSDTISDII YSISPEDGLP LRLAVHPSGD GVICFFANSC KFFEINPKGA CKLKASEREL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGGAATCAA AGAATGCATC CTGATTGGGG ATTGGGTGCC GAGGTCGGAG GCAAAGGAAA 60
AAAGGACACT CACGAAGAAG CACCCCGTGC GTGTTTCCCG GTTGTTGCCT CTTGGACTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

ppp:PHYPADRAFT_112962

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001671	Ailuropoda melanoleuca	28.31	2.00e-15	75.90
IUUC-Ame-010812	Astyanax mexicanus	37.68	2.00e-10	58.90
IUUC-Bta-012386	Bos taurus	27.65	5.00e-16	78.20
IUUC-Bdi-014110	Brachypodium distachyon	38.68	8.00e-56	210.00
IUUC-Cel-018480	Caenorhabditis elegans	25.08	3.00e-12	65.50
IUUC-Cja-018998	Callithrix jacchus	26.10	9.00e-17	80.50
IUUC-Cfa-020666	Canis familiaris	27.51	3.00e-17	82.00
IUUC-Csa-023521	Chlorocebus sabaeus	28.44	2.00e-16	79.30
IUUC-Dre-027832	Danio rerio	29.59	4.00e-17	81.60
IUUC-Dno-028989	Dasypus novemcinctus	27.07	3.00e-17	82.00
IUUC-Dor-030829	Dipodomys ordii	35.29	5.00e-07	48.90
IUUC-Dme-031901	Drosophila melanogaster	29.23	7.00e-18	84.30
IUUC-Ete-032290	Echinops telfairi	29.82	7.00e-17	80.90
IUUC-Eca-033917	Equus caballus	27.65	3.00e-16	78.60
IUUC-Fca-036323	Felis catus	27.51	7.00e-17	80.90
IUUC-Gmo-038693	Gadus morhua	27.16	1.00e-18	86.70
IUUC-Gga-040702	Gallus gallus	31.10	1.00e-18	87.00
IUUC-Gac-042635	Gasterosteus aculeatus	27.31	2.00e-13	69.70
IUUC-Gma-043653	Glycine max	40.58	2.00e-75	275.00
IUUC-Ggo-044648	Gorilla gorilla	28.11	2.00e-17	82.40
IUUC-Hsa-046003	Homo sapiens	28.11	2.00e-17	82.40
IUUC-Itr-048613	Ictidomys tridecemlineatus	29.22	1.00e-16	80.10
IUUC-Lch-049473	Latimeria chalumnae	28.31	4.00e-16	78.60
IUUC-Lpe-051586	Leersia perrieri	41.04	8.00e-56	210.00
IUUC-Loc-052177	Lepisosteus oculatus	30.84	3.00e-21	95.50
IUUC-Laf-054366	Loxodonta africana	28.57	2.00e-16	79.30
IUUC-Mcc-055775	Macaca mulatta	28.57	1.00e-17	83.60
IUUC-Meu-056562	Macropus eugenii	25.81	6.00e-11	61.20
IUUC-Mtr-058623	Medicago truncatula	40.21	4.00e-76	277.00
IUUC-Mmr-061126	Microcebus murinus	30.59	1.00e-18	86.70
IUUC-Mdo-062928	Monodelphis domestica	28.11	6.00e-16	77.80
IUUC-Mmu-064083	Mus musculus	26.38	2.00e-17	82.40
IUUC-Mpu-066857	Mustela putorius furo	26.91	8.00e-18	84.00
IUUC-Mlu-067891	Myotis lucifugus	28.11	2.00e-15	76.30
IUUC-Nle-070030	Nomascus leucogenys	28.24	4.00e-17	81.60
IUUC-Opr-070864	Ochotona princeps	29.03	5.00e-17	81.60
IUUC-Ont-072204	Oreochromis niloticus	28.51	5.00e-20	91.30
IUUC-Oan-073643	Ornithorhynchus anatinus	28.19	3.00e-13	68.20
IUUC-Ocu-074217	Oryctolagus cuniculus	28.90	5.00e-16	78.20
IUUC-Obr-076826	Oryza brachyantha	39.16	2.00e-56	212.00
IUUC-Oni-082827	Oryza nivara	39.93	9.00e-54	203.00
IUUC-Opu-083159	Oryza punctata	37.58	4.00e-56	211.00
IUUC-Oru-085039	Oryza rufipogon	39.93	9.00e-54	203.00
IUUC-Ola-087223	Oryzias latipes	28.57	7.00e-19	87.80
IUUC-Oga-088417	Otolemur garnettii	27.85	3.00e-15	75.50
IUUC-Oar-090435	Ovis aries	27.65	3.00e-16	79.00
IUUC-Ptr-090869	Pan troglodytes	28.11	1.00e-10	60.10
IUUC-Pan-092527	Papio anubis	28.44	2.00e-16	79.30
IUUC-Pma-094156	Petromyzon marinus	27.12	4.00e-17	82.00
IUUC-Pfo-097488	Poecilia formosa	29.00	1.00e-18	86.70
IUUC-Pab-097720	Pongo abelii	28.11	2.00e-17	82.80
IUUC-Pop-099736	Populus trichocarpa	37.47	2.00e-69	254.00
IUUC-Pca-100288	Procavia capensis	28.89	4.00e-15	75.10
IUUC-Ppe-101362	Prunus persica	42.17	6.00e-68	250.00
IUUC-Pva-103192	Pteropus vampyrus	28.57	5.00e-17	81.60
IUUC-Rno-106123	Rattus norvegicus	26.77	1.00e-17	83.60
IUUC-Sha-107169	Sarcophilus harrisii	25.76	2.00e-15	75.90
IUUC-Smo-108754	Selaginella moellendorffii	48.87	9.00e-69	252.00
IUUC-Sar-113218	Sorex araneus	28.18	3.00e-12	64.30
IUUC-Tru-117866	Takifugu rubripes	28.21	4.00e-17	81.60
IUUC-Ttr-128585	Tursiops truncatus	28.11	1.00e-16	80.50
IUUC-Vvi-131686	Vitis vinifera	41.93	5.00e-69	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence