iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099453

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Grr1 family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTR_0006s27020g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s27020	POPTR_0006s27020.1	POPTR_0006s27020.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	25.36	6.00e-28	122.00	IUUC-Cel-018603

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSKVFGFAGE NDFCPGGPIY TNHKEQNLFL SIGRPVDVYF PSRKRSRISA PFVFTEERFE 60
QKKQASIEFL PDECLFEIFR RLPGGDERGA CACVSKRWLS LLSNICKDEL CSQNESAKKN 120

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Nucleotide Sequence
(Fasta)

ATGTCTAAGG TCTTTGGATT TGCTGGTAAA GACTCTGAAT TTTTCTTTTA TGTTCTCAAA 60
TTCCATGCTT TTTTTTGTTT TGTCTTCTCT GCTGAATTAT ATGTCTAGTT AGCTTTGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF00646--F-box
PF13516--LRR_6

SMART

SM00256--FBOX
SM00367--LRR_CC

KEGG

pop:POPTR_0006s27020g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000881	Aegilops tauschii	51.18	2.00e-167	582.00
IUUC-Ago-007921	Ashbya gossypii	24.84	6.00e-16	79.70
IUUC-Bdi-014596	Brachypodium distachyon	50.51	9.00e-165	573.00
IUUC-Bol-015153	Brassica oleracea	62.40	0.00e+00	775.00
IUUC-Bra-017379	Brassica rapa	61.79	0.00e+00	742.00
IUUC-Cel-018603	Caenorhabditis elegans	25.78	4.00e-31	128.00
IUUC-Cfa-021192	Canis familiaris	25.71	6.00e-30	125.00
IUUC-Cre-022794	Chlamydomonas reinhardtii	27.75	1.00e-04	40.80
IUUC-Cin-025793	Ciona intestinalis	26.75	5.00e-32	132.00
IUUC-Csv-025897	Ciona savignyi	31.43	3.00e-33	135.00
IUUC-Cne-027024	Cryptococcus neoformans	25.31	9.00e-17	82.00
IUUC-Dre-027642	Danio rerio	30.59	4.00e-34	138.00
IUUC-Fca-035625	Felis catus	25.58	2.00e-26	113.00
IUUC-Fal-037266	Ficedula albicollis	29.41	3.00e-33	135.00
IUUC-Ggr-039725	Gaeumannomyces graminis	24.60	1.00e-25	111.00
IUUC-Gma-042946	Glycine max	72.57	0.00e+00	944.00
IUUC-Hvu-047403	Hordeum vulgare	52.03	3.00e-153	534.00
IUUC-Lpe-051075	Leersia perrieri	52.28	8.00e-169	586.00
IUUC-Loc-052210	Lepisosteus oculatus	29.71	2.00e-33	135.00
IUUC-Mor-057058	Magnaporthe oryzae	23.17	9.00e-27	115.00
IUUC-Mtr-057658	Medicago truncatula	71.05	0.00e+00	919.00
IUUC-Mac-065656	Musa acuminata	53.58	0.00e+00	674.00
IUUC-Opr-070457	Ochotona princeps	24.44	2.00e-29	123.00
IUUC-Ocu-074513	Oryctolagus cuniculus	24.69	8.00e-30	124.00
IUUC-Oba-075482	Oryza barthii	50.92	2.00e-170	591.00
IUUC-Obr-076655	Oryza brachyantha	52.31	1.00e-138	485.00
IUUC-Ogl-077627	Oryza glaberrima	51.08	4.00e-171	594.00
IUUC-Ogu-078848	Oryza glumaepatula	50.75	3.00e-170	591.00
IUUC-Oin-079776	Oryza indica	50.92	6.00e-170	590.00
IUUC-Olo-080728	Oryza longistaminata	52.31	1.00e-139	489.00
IUUC-Ome-081750	Oryza meridionalis	51.60	5.00e-173	600.00
IUUC-Oni-082957	Oryza nivara	50.92	3.00e-170	591.00
IUUC-Opu-083568	Oryza punctata	51.78	2.00e-169	588.00
IUUC-Oru-084584	Oryza rufipogon	51.01	1.00e-169	589.00
IUUC-Osa-085423	Oryza sativa	51.01	1.00e-169	589.00
IUUC-Ola-086829	Oryzias latipes	32.36	4.00e-36	144.00
IUUC-Pma-094494	Petromyzon marinus	29.45	8.00e-30	124.00
IUUC-Ppe-101207	Prunus persica	74.88	0.00e+00	980.00
IUUC-Pva-103166	Pteropus vampyrus	24.69	2.00e-28	119.00
IUUC-Pte-104086	Pyrenophora teres	23.98	4.00e-28	119.00
IUUC-Pyt-104451	Pyrenophora triticirepentis	23.40	9.00e-27	114.00
IUUC-Sit-110627	Setaria italica	52.09	1.00e-177	615.00
IUUC-Sbi-114535	Sorghum bicolor	52.23	7.00e-172	596.00
IUUC-Tgu-117432	Taeniopygia guttata	24.63	8.00e-28	117.00
IUUC-Tru-117535	Takifugu rubripes	29.71	7.00e-34	137.00
IUUC-Tsy-119620	Tarsius syrichta	24.45	2.00e-30	127.00
IUUC-Tca-121078	Theobroma cacao	77.55	0.00e+00	958.00
IUUC-Tre-122026	Trichoderma reesei	22.56	5.00e-25	108.00
IUUC-Tvi-122487	Trichoderma virens	22.18	8.00e-24	104.00
IUUC-Tae-125289	Triticum aestivum	51.38	9.00e-165	573.00
IUUC-Tur-126530	Triticum urartu	52.16	9.00e-136	476.00
IUUC-Vpa-130267	Vicugna pacos	29.41	1.00e-29	123.00
IUUC-Vvi-131401	Vitis vinifera	68.77	0.00e+00	842.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence