iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117831

Ensembl Protein ID

ENSTRUP00000044051.1

UniProt Accession

H2V4B7; H2V4B7_TAKRU

Protein Name

Uncharacterized protein

Gene Name

tdrd3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000017194.1	ENSTRUT00000044197.1	ENSTRUP00000044049.1
ENSTRUG00000017194.1	ENSTRUT00000044198.1	ENSTRUP00000044050.1
ENSTRUG00000017194.1	ENSTRUT00000044199.1	ENSTRUP00000044051.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.80e-11	43.0	280	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l+ ++eMGF+re+a+qaL ++nnnle+A++ Ll+
   Q: 280  DERALRDIMEMGFNREAARQALMDNNNNLEVALNSLLT 317
           7899********************************97 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

LTEEGIAELK GSNEKITTNE IIRIVLDSDL RPIGRKFLPS DINSGKTEEL EGPCVLQLQK 60
VRNISASKDH EESQGAPRML RLQMTDGHTI CVGLEYKPLS KISLNTPPGT KIKLLGTVQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGATT TGGCATCTTC TCTGGAAAAA GAGGGCTGGT AGGTAACATT GTAGCAGACG 60
ATAGTGAGCT ACCAGCTAAC TAGCTCACCG TTGTGCCAGT TTGGTGTTCA CTCACAACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0006397--P:mRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	35.71	7.00e-17	81.30
IUUC-Aml-001751	Ailuropoda melanoleuca	46.50	4.00e-155	541.00
IUUC-Atr-002788	Amborella trichopoda	32.24	1.00e-21	97.40
IUUC-Apl-004055	Anas platyrhynchos	59.08	2.00e-102	366.00
IUUC-Aca-004367	Anolis carolinensis	47.41	9.00e-171	593.00
IUUC-Aly-006072	Arabidopsis lyrata	34.62	1.00e-21	97.40
IUUC-Ath-007491	Arabidopsis thaliana	33.33	3.00e-21	96.30
IUUC-Ame-011439	Astyanax mexicanus	56.62	0.00e+00	652.00
IUUC-Bta-012894	Bos taurus	45.71	1.00e-146	513.00
IUUC-Bdi-014462	Brachypodium distachyon	33.55	5.00e-20	92.00
IUUC-Bol-015343	Brassica oleracea	35.40	3.00e-21	96.30
IUUC-Bra-016787	Brassica rapa	33.88	2.00e-21	96.70
IUUC-Cel-018154	Caenorhabditis elegans	39.26	1.00e-27	117.00
IUUC-Cja-019364	Callithrix jacchus	45.88	1.00e-128	453.00
IUUC-Cfa-021166	Canis familiaris	47.64	6.00e-154	538.00
IUUC-Cpo-021678	Cavia porcellus	52.26	2.00e-73	270.00
IUUC-Csa-023299	Chlorocebus sabaeus	48.20	4.00e-169	588.00
IUUC-Cho-024694	Choloepus hoffmanni	59.80	7.00e-83	301.00
IUUC-Cin-025191	Ciona intestinalis	41.33	6.00e-37	147.00
IUUC-Csv-026348	Ciona savignyi	43.75	4.00e-11	59.70
IUUC-Dre-028715	Danio rerio	55.76	0.00e+00	657.00
IUUC-Dno-030091	Dasypus novemcinctus	57.97	1.00e-121	430.00
IUUC-Dor-030807	Dipodomys ordii	47.11	8.00e-60	224.00
IUUC-Dme-031770	Drosophila melanogaster	30.95	7.00e-37	149.00
IUUC-Ete-032507	Echinops telfairi	36.90	2.00e-36	147.00
IUUC-Eca-033406	Equus caballus	43.66	5.00e-102	365.00
IUUC-Eeu-034600	Erinaceus europaeus	42.36	2.00e-64	240.00
IUUC-Fca-035916	Felis catus	47.01	5.00e-157	548.00
IUUC-Fal-036658	Ficedula albicollis	47.76	1.00e-155	543.00
IUUC-Gmo-038974	Gadus morhua	65.02	1.00e-123	437.00
IUUC-Gga-040195	Gallus gallus	48.93	9.00e-166	577.00
IUUC-Gac-042537	Gasterosteus aculeatus	71.25	0.00e+00	922.00
IUUC-Gma-044234	Glycine max	40.12	1.00e-23	104.00
IUUC-Ggo-044715	Gorilla gorilla	56.90	7.00e-97	348.00
IUUC-Hsa-045814	Homo sapiens	48.20	6.00e-167	580.00
IUUC-Hvu-047365	Hordeum vulgare	32.89	2.00e-16	80.50
IUUC-Itr-047866	Ictidomys tridecemlineatus	47.55	7.00e-160	557.00
IUUC-Lch-050393	Latimeria chalumnae	48.28	6.00e-158	551.00
IUUC-Lpe-050691	Leersia perrieri	33.55	3.00e-20	92.80
IUUC-Loc-052859	Lepisosteus oculatus	54.57	0.00e+00	641.00
IUUC-Laf-053953	Loxodonta africana	51.85	5.00e-27	115.00
IUUC-Mcc-055846	Macaca mulatta	48.40	2.00e-168	586.00
IUUC-Meu-056790	Macropus eugenii	53.78	4.00e-63	236.00
IUUC-Mtr-058749	Medicago truncatula	38.60	3.00e-19	89.40
IUUC-Mla-058959	Melampsora laricipopulina	38.24	3.00e-05	42.70
IUUC-Mga-059656	Meleagris gallopavo	49.17	5.00e-157	548.00
IUUC-Mmr-061089	Microcebus murinus	46.15	4.00e-142	498.00
IUUC-Mdo-063043	Monodelphis domestica	55.65	5.00e-85	308.00
IUUC-Mmu-063654	Mus musculus	60.42	3.00e-117	416.00
IUUC-Mac-064947	Musa acuminata	34.86	4.00e-17	82.40
IUUC-Mpu-066115	Mustela putorius furo	43.74	5.00e-103	368.00
IUUC-Mlu-066974	Myotis lucifugus	45.40	2.00e-124	439.00
IUUC-Nle-069184	Nomascus leucogenys	48.35	3.00e-167	582.00
IUUC-Opr-070770	Ochotona princeps	41.06	4.00e-101	362.00
IUUC-Ont-072040	Oreochromis niloticus	72.42	0.00e+00	1009.00
IUUC-Oan-073448	Ornithorhynchus anatinus	48.24	7.00e-29	120.00
IUUC-Ocu-074405	Oryctolagus cuniculus	48.52	7.00e-161	560.00
IUUC-Oba-075977	Oryza barthii	33.97	8.00e-14	71.20
IUUC-Obr-076298	Oryza brachyantha	31.21	4.00e-18	85.50
IUUC-Ogl-077706	Oryza glaberrima	33.97	5.00e-14	72.00
IUUC-Ogu-078381	Oryza glumaepatula	33.97	2.00e-14	73.60
IUUC-Oin-080150	Oryza indica	33.97	4.00e-14	72.40
IUUC-Ome-081153	Oryza meridionalis	33.76	8.00e-13	68.20
IUUC-Oni-083115	Oryza nivara	33.97	8.00e-14	71.20
IUUC-Opu-083860	Oryza punctata	32.90	1.00e-18	87.80
IUUC-Oru-084859	Oryza rufipogon	33.97	4.00e-14	72.40
IUUC-Osa-085567	Oryza sativa	34.62	8.00e-13	68.20
IUUC-Ola-087049	Oryzias latipes	66.02	0.00e+00	920.00
IUUC-Olu-087599	Ostreococcus lucimarinus	43.90	1.60e-01	30.40
IUUC-Oga-088455	Otolemur garnettii	47.84	2.00e-161	562.00
IUUC-Oar-090096	Ovis aries	47.71	1.00e-161	563.00
IUUC-Ptr-090974	Pan troglodytes	46.57	8.00e-136	477.00
IUUC-Pan-092657	Papio anubis	59.82	6.00e-130	458.00
IUUC-Psi-093113	Pelodiscus sinensis	44.91	7.00e-128	451.00
IUUC-Ppa-095466	Physcomitrella patens	41.10	4.00e-27	115.00
IUUC-Pfo-096631	Poecilia formosa	69.81	0.00e+00	975.00
IUUC-Pab-098070	Pongo abelii	48.07	1.00e-166	580.00
IUUC-Pop-099235	Populus trichocarpa	36.13	1.00e-20	94.40
IUUC-Pca-101032	Procavia capensis	63.07	3.00e-77	282.00
IUUC-Ppe-101793	Prunus persica	32.72	4.00e-21	95.90
IUUC-Pva-102290	Pteropus vampyrus	44.02	4.00e-127	448.00
IUUC-Rno-105080	Rattus norvegicus	56.66	8.00e-82	298.00
IUUC-Sha-107598	Sarcophilus harrisii	50.92	5.00e-98	352.00
IUUC-Sit-110735	Setaria italica	30.17	3.00e-18	86.30
IUUC-Sly-111126	Solanum lycopersicum	36.84	1.00e-18	87.80
IUUC-Stu-112780	Solanum tuberosum	37.74	8.00e-22	97.80
IUUC-Sar-113418	Sorex araneus	55.24	2.00e-85	309.00
IUUC-Sbi-113925	Sorghum bicolor	32.22	3.00e-20	92.80
IUUC-Sre-114917	Sporisorium reilianum	32.65	9.00e-06	44.70
IUUC-Ssc-115712	Sus scrofa	47.44	7.00e-160	557.00
IUUC-Tgu-117148	Taeniopygia guttata	48.12	3.00e-163	568.00
IUUC-Tsy-118917	Tarsius syrichta	44.29	2.00e-114	406.00
IUUC-Tni-120783	Tetraodon nigroviridis	86.03	0.00e+00	1186.00
IUUC-Tca-121430	Theobroma cacao	36.51	2.00e-04	40.40
IUUC-Tae-123752	Triticum aestivum	35.71	4.00e-17	82.40
IUUC-Tur-126238	Triticum urartu	34.38	6.00e-16	78.60
IUUC-Ttr-128615	Tursiops truncatus	46.33	6.00e-61	228.00
IUUC-Vpa-130531	Vicugna pacos	58.87	7.00e-90	325.00
IUUC-Vvi-131607	Vitis vinifera	34.83	2.00e-16	80.10
IUUC-Xtr-132787	Xenopus tropicalis	44.62	3.00e-132	465.00
IUUC-Xma-133815	Xiphophorus maculatus	66.28	0.00e+00	874.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence