iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tgu-117452

Ensembl Protein ID

ENSTGUP00000001314.1

UniProt Accession

H0YSQ3; H0YSQ3_TAEGU

Genbank Protein ID

ENSTGUP00000001314

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01051077

Gene Name

KDM5B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000001257.1	ENSTGUT00000001327.1	ENSTGUP00000001314.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.40e-24	84.2	240	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vCl+Cg+g +++  l+ C+ C++ +H  Cl ++   ++p+ + w Cp+C 
   Q: 240  VCLLCGSGNDED-RLLLCDGCDDSYHTFCLIPP-LHDVPKGD-WRCPQCL 286
           8********988.6*******************.*******7.******5 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

DWQPPFACDV DKLHFTPRIQ RLNELEAQTR VKLNFLDQIA KFWELQGCTL KIPHVERKIL 60
DLFQLNRLVA EQGGFDVVCK ERKWTKIATR MGFAPGKAVG SHIRAHYERI LYPYNLFQSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTGGCAGC CCCCATTCGC GTGCGATGTC GACAAGCTTC ACTTCACACC GAGGATCCAG 60
AGGCTCAATG AACTGGAGGT AAACTGGAAA GCTGAGCAGT ACTTCTGCTC CCAAATGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0034648--F:histone demethylase activity (H3-dimethyl-K4 specific)
GO:0034647--F:histone demethylase activity (H3-trimethyl-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0010628--P:positive regulation of gene expression
GO:0033601--P:positive regulation of mammary gland epithelial cell proliferation
GO:0009791--P:post-embryonic development
GO:2000864--P:regulation of estradiol secretion
GO:0007338--P:single fertilization
GO:0061038--P:uterus morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	34.65	1.00e-95	344.00
IUUC-Aml-001963	Ailuropoda melanoleuca	83.57	0.00e+00	2398.00
IUUC-Apl-003770	Anas platyrhynchos	92.63	0.00e+00	2338.00
IUUC-Aca-004867	Anolis carolinensis	82.68	0.00e+00	2438.00
IUUC-Acl-008162	Aspergillus clavatus	29.75	3.00e-114	406.00
IUUC-Afl-008625	Aspergillus flavus	30.19	3.00e-109	390.00
IUUC-Afu-008796	Aspergillus fumigatus	30.48	4.00e-114	406.00
IUUC-Ani-009139	Aspergillus nidulans	35.74	3.00e-109	390.00
IUUC-Aor-010155	Aspergillus oryzae	30.19	3.00e-109	390.00
IUUC-Ame-010620	Astyanax mexicanus	61.76	0.00e+00	1814.00
IUUC-Bgr-012241	Blumeria graminis	28.76	1.00e-103	372.00
IUUC-Bta-012733	Bos taurus	81.39	0.00e+00	2329.00
IUUC-Bci-013992	Botrytis cinerea	34.94	5.00e-107	382.00
IUUC-Bol-015336	Brassica oleracea	35.65	1.00e-14	76.30
IUUC-Bra-017998	Brassica rapa	34.40	3.00e-13	72.00
IUUC-Cja-019050	Callithrix jacchus	83.22	0.00e+00	2415.00
IUUC-Cfa-021015	Canis familiaris	83.63	0.00e+00	2396.00
IUUC-Cpo-022340	Cavia porcellus	83.76	0.00e+00	2367.00
IUUC-Csa-023441	Chlorocebus sabaeus	83.63	0.00e+00	2390.00
IUUC-Cho-024823	Choloepus hoffmanni	88.55	0.00e+00	1469.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	30.95	3.00e-110	393.00
IUUC-Cne-026851	Cryptococcus neoformans	30.34	2.00e-111	397.00
IUUC-Dre-027707	Danio rerio	60.41	0.00e+00	1731.00
IUUC-Dno-028978	Dasypus novemcinctus	83.42	0.00e+00	2399.00
IUUC-Dor-030854	Dipodomys ordii	74.39	0.00e+00	1639.00
IUUC-Ete-032760	Echinops telfairi	80.12	0.00e+00	1632.00
IUUC-Eca-034370	Equus caballus	83.69	0.00e+00	2333.00
IUUC-Eeu-035012	Erinaceus europaeus	68.50	0.00e+00	1672.00
IUUC-Fca-035494	Felis catus	83.96	0.00e+00	2389.00
IUUC-Fal-037631	Ficedula albicollis	96.21	0.00e+00	2794.00
IUUC-Fox-037694	Fusarium oxysporum	31.92	2.00e-99	357.00
IUUC-Fso-038127	Fusarium solani	30.19	2.00e-106	380.00
IUUC-Gmo-039522	Gadus morhua	66.55	0.00e+00	1508.00
IUUC-Ggr-039929	Gaeumannomyces graminis	33.33	2.00e-101	364.00
IUUC-Gga-040802	Gallus gallus	92.25	0.00e+00	2591.00
IUUC-Gac-041461	Gasterosteus aculeatus	60.61	0.00e+00	1767.00
IUUC-Gma-042675	Glycine max	33.69	2.00e-105	377.00
IUUC-Ggo-044856	Gorilla gorilla	68.19	0.00e+00	1814.00
IUUC-Hsa-045888	Homo sapiens	81.64	0.00e+00	2391.00
IUUC-Hvu-047583	Hordeum vulgare	43.04	8.00e-16	79.00
IUUC-Itr-048297	Ictidomys tridecemlineatus	83.83	0.00e+00	2374.00
IUUC-Lch-050483	Latimeria chalumnae	65.03	0.00e+00	1942.00
IUUC-Loc-052550	Lepisosteus oculatus	69.52	0.00e+00	1971.00
IUUC-Laf-053761	Loxodonta africana	82.61	0.00e+00	2359.00
IUUC-Mcc-055505	Macaca mulatta	81.64	0.00e+00	2392.00
IUUC-Mpo-057317	Magnaporthe poae	34.16	6.00e-105	375.00
IUUC-Mga-059358	Meleagris gallopavo	91.69	0.00e+00	2669.00
IUUC-Mmr-060863	Microcebus murinus	83.23	0.00e+00	2371.00
IUUC-Mdo-061957	Monodelphis domestica	84.56	0.00e+00	2472.00
IUUC-Mmu-063944	Mus musculus	82.54	0.00e+00	2345.00
IUUC-Mac-065069	Musa acuminata	35.14	4.00e-08	54.70
IUUC-Mpu-066719	Mustela putorius furo	82.26	0.00e+00	2383.00
IUUC-Mlu-068086	Myotis lucifugus	79.57	0.00e+00	2266.00
IUUC-Nfi-068430	Neosartorya fischeri	29.71	3.00e-111	397.00
IUUC-Ncr-068763	Neurospora crassa	34.19	1.00e-107	385.00
IUUC-Nle-069256	Nomascus leucogenys	81.84	0.00e+00	2397.00
IUUC-Ont-071756	Oreochromis niloticus	61.13	0.00e+00	1779.00
IUUC-Oan-073568	Ornithorhynchus anatinus	86.29	0.00e+00	2476.00
IUUC-Ocu-073961	Oryctolagus cuniculus	82.21	0.00e+00	2352.00
IUUC-Ogl-077886	Oryza glaberrima	38.83	2.00e-16	81.30
IUUC-Olo-080668	Oryza longistaminata	38.83	6.00e-16	80.50
IUUC-Opu-083164	Oryza punctata	33.82	9.00e-87	315.00
IUUC-Osa-085487	Oryza sativa	38.83	2.00e-16	81.30
IUUC-Ola-086448	Oryzias latipes	60.13	0.00e+00	1735.00
IUUC-Oga-088501	Otolemur garnettii	79.45	0.00e+00	2041.00
IUUC-Oar-090162	Ovis aries	80.65	0.00e+00	2315.00
IUUC-Ptr-090816	Pan troglodytes	81.77	0.00e+00	2402.00
IUUC-Pan-092764	Papio anubis	83.63	0.00e+00	2392.00
IUUC-Psi-093918	Pelodiscus sinensis	86.46	0.00e+00	2294.00
IUUC-Ppa-095646	Physcomitrella patens	45.78	1.00e-15	79.70
IUUC-Pfo-096777	Poecilia formosa	61.53	0.00e+00	1792.00
IUUC-Pab-097854	Pongo abelii	83.32	0.00e+00	1883.00
IUUC-Pca-100241	Procavia capensis	78.41	0.00e+00	1522.00
IUUC-Ppe-101504	Prunus persica	32.88	1.00e-103	371.00
IUUC-Pva-103035	Pteropus vampyrus	77.72	0.00e+00	1999.00
IUUC-Rno-105574	Rattus norvegicus	81.35	0.00e+00	2293.00
IUUC-Sce-106207	Saccharomyces cerevisiae	36.71	2.00e-74	273.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	30.22	6.00e-112	399.00
IUUC-Sly-111298	Solanum lycopersicum	42.44	1.00e-101	365.00
IUUC-Sar-113477	Sorex araneus	82.03	0.00e+00	2158.00
IUUC-Ssc-116132	Sus scrofa	84.80	0.00e+00	2120.00
IUUC-Tru-117561	Takifugu rubripes	62.47	0.00e+00	1625.00
IUUC-Tsy-119271	Tarsius syrichta	82.48	0.00e+00	1887.00
IUUC-Tni-119650	Tetraodon nigroviridis	64.57	0.00e+00	1650.00
IUUC-Tca-121478	Theobroma cacao	42.12	3.00e-103	370.00
IUUC-Tur-126632	Triticum urartu	34.44	9.00e-96	345.00
IUUC-Tbe-127890	Tupaia belangeri	75.53	0.00e+00	1280.00
IUUC-Ttr-128546	Tursiops truncatus	80.88	0.00e+00	1742.00
IUUC-Vda-129733	Verticillium dahliae	29.93	4.00e-101	363.00
IUUC-Vpa-130432	Vicugna pacos	80.02	0.00e+00	1399.00
IUUC-Vvi-131071	Vitis vinifera	30.62	3.00e-82	300.00
IUUC-Xtr-132008	Xenopus tropicalis	70.86	0.00e+00	2070.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence