iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000014852.1	ENSPSIT00000016949.1	ENSPSIP00000016871.1
ENSPSIG00000014852.1	ENSPSIT00000016969.1	ENSPSIP00000016891.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-20	70.2	546	582

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHtd+ ++la  ++ + + ++++D+ i +WD +++++
   Q: 546  GHTDELWGLAIhPSkPQFFTCGHDKHITLWDATSHRP 582
           8***********778****************998876 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

IPFCLDDSAS AASSMEVTDR IASLEQRVQM QEDDIQLLKS ALADVVRRLN ITEEQQAMQN 60
KKGPTKARPL VQTLPLRTTI NNGTVLPKKP SGSLPSPSGS RKETVPPSTK SHGLNRSVSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGACG GTTTCTCCAG CTACAGCAGC CTCTACGACA CCTCCTCGCT GCTCCAGTTC 60
TGCAACGGTA AGGGGGGCTG GGCCCCGCGG AGCCGGGGCT GGCTGCCCGG GCTGCACCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:1990023--C:mitotic spindle midzone
GO:0097431--C:mitotic spindle pole
GO:0007420--P:brain development
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0007052--P:mitotic spindle organization
GO:0007405--P:neuroblast proliferation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002077	Ailuropoda melanoleuca	91.13	0.00e+00	1479.00
IUUC-Apl-004179	Anas platyrhynchos	94.11	0.00e+00	1496.00
IUUC-Aca-004993	Anolis carolinensis	90.34	0.00e+00	1451.00
IUUC-Ame-011332	Astyanax mexicanus	76.28	0.00e+00	1289.00
IUUC-Bta-013419	Bos taurus	78.50	0.00e+00	1216.00
IUUC-Cja-018976	Callithrix jacchus	92.02	0.00e+00	1494.00
IUUC-Cfa-021276	Canis familiaris	90.94	0.00e+00	1452.00
IUUC-Csa-023355	Chlorocebus sabaeus	92.06	0.00e+00	1477.00
IUUC-Cin-025784	Ciona intestinalis	55.61	0.00e+00	750.00
IUUC-Csv-026305	Ciona savignyi	48.39	0.00e+00	754.00
IUUC-Dre-028728	Danio rerio	75.70	0.00e+00	1268.00
IUUC-Dno-029055	Dasypus novemcinctus	91.10	0.00e+00	1509.00
IUUC-Dor-030628	Dipodomys ordii	91.08	0.00e+00	1450.00
IUUC-Dme-032093	Drosophila melanogaster	37.38	9.00e-121	427.00
IUUC-Ete-032845	Echinops telfairi	91.04	0.00e+00	794.00
IUUC-Eca-034266	Equus caballus	89.76	0.00e+00	1483.00
IUUC-Eeu-035302	Erinaceus europaeus	63.49	2.00e-153	535.00
IUUC-Fca-035446	Felis catus	90.07	0.00e+00	1438.00
IUUC-Fal-036734	Ficedula albicollis	95.24	0.00e+00	1541.00
IUUC-Gmo-038689	Gadus morhua	73.29	0.00e+00	1246.00
IUUC-Gga-040934	Gallus gallus	96.69	0.00e+00	1165.00
IUUC-Gac-042476	Gasterosteus aculeatus	75.67	0.00e+00	1276.00
IUUC-Ggo-044828	Gorilla gorilla	91.81	0.00e+00	1510.00
IUUC-Hsa-045664	Homo sapiens	91.81	0.00e+00	1508.00
IUUC-Itr-048788	Ictidomys tridecemlineatus	58.20	0.00e+00	976.00
IUUC-Lch-050508	Latimeria chalumnae	83.16	0.00e+00	1398.00
IUUC-Loc-052823	Lepisosteus oculatus	80.64	0.00e+00	1338.00
IUUC-Laf-054164	Loxodonta africana	86.33	0.00e+00	1357.00
IUUC-Mcc-055810	Macaca mulatta	89.82	0.00e+00	1462.00
IUUC-Meu-056664	Macropus eugenii	64.91	0.00e+00	926.00
IUUC-Mga-059405	Meleagris gallopavo	91.20	0.00e+00	1486.00
IUUC-Mmr-061144	Microcebus murinus	89.93	0.00e+00	1456.00
IUUC-Mdo-062834	Monodelphis domestica	89.28	0.00e+00	1473.00
IUUC-Mmu-063955	Mus musculus	89.73	0.00e+00	1442.00
IUUC-Mpu-066240	Mustela putorius furo	90.07	0.00e+00	1419.00
IUUC-Mlu-067847	Myotis lucifugus	89.63	0.00e+00	1065.00
IUUC-Nle-069783	Nomascus leucogenys	90.34	0.00e+00	1463.00
IUUC-Opr-070409	Ochotona princeps	83.05	0.00e+00	1310.00
IUUC-Ont-072468	Oreochromis niloticus	75.87	0.00e+00	1281.00
IUUC-Oan-073315	Ornithorhynchus anatinus	93.42	0.00e+00	1488.00
IUUC-Ocu-074604	Oryctolagus cuniculus	87.68	0.00e+00	1191.00
IUUC-Ola-086734	Oryzias latipes	72.32	0.00e+00	1249.00
IUUC-Oga-089105	Otolemur garnettii	91.81	0.00e+00	1474.00
IUUC-Oar-090057	Ovis aries	90.06	0.00e+00	1464.00
IUUC-Ptr-091138	Pan troglodytes	92.05	0.00e+00	1513.00
IUUC-Pan-092691	Papio anubis	85.33	0.00e+00	1368.00
IUUC-Pma-094555	Petromyzon marinus	57.30	0.00e+00	828.00
IUUC-Pfo-096794	Poecilia formosa	75.31	0.00e+00	1249.00
IUUC-Pab-097787	Pongo abelii	89.70	0.00e+00	1479.00
IUUC-Pca-101070	Procavia capensis	59.32	0.00e+00	818.00
IUUC-Pva-102676	Pteropus vampyrus	90.17	0.00e+00	1436.00
IUUC-Rno-105971	Rattus norvegicus	79.85	0.00e+00	1226.00
IUUC-Sha-107530	Sarcophilus harrisii	92.06	0.00e+00	1464.00
IUUC-Ssc-116169	Sus scrofa	77.68	0.00e+00	1004.00
IUUC-Tgu-117046	Taeniopygia guttata	93.92	0.00e+00	1484.00
IUUC-Tru-118596	Takifugu rubripes	72.21	0.00e+00	1243.00
IUUC-Tsy-119142	Tarsius syrichta	88.82	0.00e+00	1077.00
IUUC-Tni-120377	Tetraodon nigroviridis	74.63	0.00e+00	1264.00
IUUC-Tbe-127916	Tupaia belangeri	75.08	0.00e+00	961.00
IUUC-Ttr-129042	Tursiops truncatus	91.77	0.00e+00	1503.00
IUUC-Xtr-132117	Xenopus tropicalis	83.31	0.00e+00	1344.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence