iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016861

Ensembl Protein ID

Bra026840.1-P

UniProt Accession

M4EDI0; M4EDI0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026840	Bra026840.1	Bra026840.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	74.81	3.00e-91	331.00	IUUC-Ath-006885

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSEHLVVYVD RLMQPVPSPP VESETPEPSC IMEDNAVDIY EREGEEEEDP LVWWGECRIC 60
QEESAIKNLE SPCSCNGSLK YAHRKCVQRW CNEKGNTICE ICHQPYQAGY TSPPPPPQSD 120

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Nucleotide Sequence
(Fasta)

ATGAGTGAAC ACTTGGTGGT ATATGTCGAC CGACTGATGC AGCCGGTTCC GTCACCTCCC 60
GTTGAGTCAG AAACACCTGA GCCGTCTTGC ATCATGGAGG ATAATGCAGT TGATATCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR022143--DUF3675
IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12428--DUF3675
PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002860	Amborella trichopoda	50.72	7.00e-59	220.00
IUUC-Apl-003523	Anas platyrhynchos	32.86	6.00e-09	53.90
IUUC-Aca-005012	Anolis carolinensis	36.00	3.00e-10	58.50
IUUC-Aly-005700	Arabidopsis lyrata	75.00	6.00e-78	283.00
IUUC-Ath-006885	Arabidopsis thaliana	74.53	1.00e-82	298.00
IUUC-Bta-012331	Bos taurus	34.67	8.00e-10	57.00
IUUC-Bdi-014827	Brachypodium distachyon	57.38	2.00e-54	205.00
IUUC-Bol-016602	Brassica oleracea	97.35	2.00e-138	484.00
IUUC-Cre-022732	Chlamydomonas reinhardtii	63.93	5.00e-21	92.40
IUUC-Eca-034097	Equus caballus	34.67	8.00e-10	57.00
IUUC-Fca-036126	Felis catus	34.67	6.00e-10	57.40
IUUC-Fal-036875	Ficedula albicollis	34.67	2.00e-09	56.20
IUUC-Gga-041200	Gallus gallus	34.67	9.00e-10	57.00
IUUC-Gac-042104	Gasterosteus aculeatus	40.00	8.00e-10	57.00
IUUC-Hvu-047133	Hordeum vulgare	50.00	7.00e-54	203.00
IUUC-Lch-049917	Latimeria chalumnae	32.53	6.00e-10	57.40
IUUC-Loc-052071	Lepisosteus oculatus	33.33	3.00e-10	58.50
IUUC-Mac-064882	Musa acuminata	58.79	5.00e-55	207.00
IUUC-Oba-075948	Oryza barthii	53.04	1.00e-49	189.00
IUUC-Obr-076491	Oryza brachyantha	48.88	6.00e-56	210.00
IUUC-Ogl-077439	Oryza glaberrima	53.04	1.00e-49	189.00
IUUC-Ogu-078523	Oryza glumaepatula	49.37	4.00e-52	197.00
IUUC-Olo-080950	Oryza longistaminata	46.52	1.00e-39	156.00
IUUC-Ome-081221	Oryza meridionalis	53.04	2.00e-49	188.00
IUUC-Oni-082096	Oryza nivara	53.59	1.00e-49	189.00
IUUC-Opu-083949	Oryza punctata	53.04	2.00e-49	188.00
IUUC-Oru-085237	Oryza rufipogon	53.04	1.00e-49	189.00
IUUC-Osa-085634	Oryza sativa	55.66	1.00e-50	192.00
IUUC-Ola-087504	Oryzias latipes	35.21	2.00e-09	56.20
IUUC-Ptr-090839	Pan troglodytes	34.67	8.00e-10	57.00
IUUC-Pma-094464	Petromyzon marinus	46.81	5.00e-10	57.40
IUUC-Pop-099863	Populus trichocarpa	57.56	4.00e-57	214.00
IUUC-Smo-109144	Selaginella moellendorffii	53.55	5.00e-49	186.00
IUUC-Sit-110567	Setaria italica	57.55	6.00e-55	206.00
IUUC-Sly-110996	Solanum lycopersicum	52.08	2.00e-61	228.00
IUUC-Stu-112782	Solanum tuberosum	52.63	2.00e-60	225.00
IUUC-Sbi-114552	Sorghum bicolor	57.08	1.00e-54	205.00
IUUC-Ssc-116322	Sus scrofa	34.67	8.00e-10	57.00
IUUC-Tgu-116459	Taeniopygia guttata	32.86	5.00e-09	54.30
IUUC-Tru-118357	Takifugu rubripes	35.21	2.00e-09	56.60
IUUC-Tni-120353	Tetraodon nigroviridis	32.47	5.00e-10	57.80
IUUC-Tca-121215	Theobroma cacao	61.98	1.00e-67	249.00
IUUC-Tae-124189	Triticum aestivum	50.78	2.00e-63	235.00
IUUC-Ttr-128776	Tursiops truncatus	34.67	8.00e-10	57.00
IUUC-Vpa-130196	Vicugna pacos	31.43	4.00e-09	54.70
IUUC-Vvi-131510	Vitis vinifera	61.97	5.00e-57	214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence