iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115883

Ensembl Protein ID

ENSSSCP00000010851.2

UniProt Accession

F1RGT1; F1RGT1_PIG

Genbank Protein ID

ENSSSCP00000010851

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU407164

Gene Name

SPRTN

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000010173.2	ENSSSCT00000011139.2	ENSSSCP00000010851.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	5.10e-07	30.1	452	474

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvCqkmvdqtdfeeHlDeCl 24
           + CPvCq++v + +++eHlD+Cl
   Q: 452  VNCPVCQSEVLEFHINEHLDRCL 474
           78********************8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MDEDLVLALR LQEEWNLQVS ERNPAQEPLS LVDASWELVD PTPDLQALFV QFNDRFFWGK 60
LEAVEVKWSV RMTLCAGICS YEGNGGMCSI RLSEPLLKLR PRKDLVETLL HEMIHAYLFV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGATACTGC GCATGGGCCG AGCATGACGT TGATGTTTGA CCGTACCCGC GAACCGTAAA 60
GGCGGTATCC GGCTACTTGA AACCTTCCTC GGGCTCAAGC TTCGGGAACC CAAGTGTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006640--SprT-like_domain
IPR006642--Znf_Rad18_put

Pfam

PF10263--SprT-like

SMART

SM00731--SprT
SM00734--ZnF_Rad18

Gene Ontology

GO:0016607--C:nuclear speck
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0031593--F:polyubiquitin binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031398--P:positive regulation of protein ubiquitination
GO:0009411--P:response to UV
GO:0019985--P:translesion synthesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001028	Aegilops tauschii	34.81	2.00e-16	79.70
IUUC-Aml-001352	Ailuropoda melanoleuca	80.74	0.00e+00	771.00
IUUC-Atr-002445	Amborella trichopoda	43.96	5.00e-42	164.00
IUUC-Apl-003724	Anas platyrhynchos	45.24	3.00e-69	254.00
IUUC-Aca-005382	Anolis carolinensis	54.38	1.00e-138	485.00
IUUC-Ame-011053	Astyanax mexicanus	48.56	6.00e-102	364.00
IUUC-Bgr-012304	Blumeria graminis	36.59	8.30e-01	27.70
IUUC-Bta-012578	Bos taurus	79.51	0.00e+00	751.00
IUUC-Bci-013808	Botrytis cinerea	50.00	1.70e-02	33.50
IUUC-Cel-018317	Caenorhabditis elegans	66.32	3.00e-81	294.00
IUUC-Cja-019824	Callithrix jacchus	78.28	0.00e+00	723.00
IUUC-Cfa-020307	Canis familiaris	81.97	0.00e+00	789.00
IUUC-Cpo-022142	Cavia porcellus	70.29	3.00e-172	597.00
IUUC-Cre-022820	Chlamydomonas reinhardtii	39.15	8.00e-31	127.00
IUUC-Csa-024002	Chlorocebus sabaeus	78.89	0.00e+00	720.00
IUUC-Cho-024371	Choloepus hoffmanni	71.09	7.00e-126	442.00
IUUC-Cin-025503	Ciona intestinalis	62.67	2.00e-88	318.00
IUUC-Csv-025903	Ciona savignyi	72.04	2.00e-87	315.00
IUUC-Cgl-026737	Colletotrichum gloeosporioides	28.21	1.00e-05	43.90
IUUC-Dre-027871	Danio rerio	47.38	8.00e-105	374.00
IUUC-Dno-029800	Dasypus novemcinctus	72.76	0.00e+00	687.00
IUUC-Dor-030856	Dipodomys ordii	57.18	1.00e-121	429.00
IUUC-Dme-031958	Drosophila melanogaster	52.84	5.00e-70	258.00
IUUC-Ete-032321	Echinops telfairi	85.59	2.00e-121	429.00
IUUC-Eca-033610	Equus caballus	81.56	0.00e+00	798.00
IUUC-Eeu-034608	Erinaceus europaeus	64.43	1.00e-167	582.00
IUUC-Fca-035456	Felis catus	76.43	0.00e+00	725.00
IUUC-Fal-036725	Ficedula albicollis	45.69	1.00e-93	336.00
IUUC-Fox-037675	Fusarium oxysporum	40.62	1.00e-01	30.00
IUUC-Fso-038353	Fusarium solani	34.09	4.00e-05	42.40
IUUC-Gmo-039428	Gadus morhua	60.67	2.00e-90	325.00
IUUC-Ggr-039914	Gaeumannomyces graminis	28.03	7.00e-05	41.60
IUUC-Gga-041138	Gallus gallus	52.85	6.00e-129	454.00
IUUC-Gac-041946	Gasterosteus aculeatus	60.16	2.00e-90	325.00
IUUC-Ggo-044909	Gorilla gorilla	77.66	0.00e+00	716.00
IUUC-Hsa-046804	Homo sapiens	78.07	0.00e+00	715.00
IUUC-Hvu-047629	Hordeum vulgare	28.64	3.00e-17	82.80
IUUC-Itr-048136	Ictidomys tridecemlineatus	72.58	0.00e+00	633.00
IUUC-Lch-050399	Latimeria chalumnae	48.43	1.00e-103	370.00
IUUC-Lpe-050694	Leersia perrieri	32.73	2.00e-17	84.30
IUUC-Loc-052526	Lepisosteus oculatus	51.02	1.00e-103	370.00
IUUC-Lma-053205	Leptosphaeria maculans	44.00	1.00e-49	189.00
IUUC-Laf-054101	Loxodonta africana	79.92	0.00e+00	780.00
IUUC-Mcc-055889	Macaca mulatta	79.10	0.00e+00	723.00
IUUC-Meu-056236	Macropus eugenii	71.62	4.00e-26	111.00
IUUC-Mor-057257	Magnaporthe oryzae	28.48	2.00e-08	53.10
IUUC-Mpo-057531	Magnaporthe poae	28.03	1.00e-04	41.20
IUUC-Mla-058857	Melampsora laricipopulina	26.13	4.90e-02	32.30
IUUC-Mga-059774	Meleagris gallopavo	50.23	1.00e-109	389.00
IUUC-Mmr-061635	Microcebus murinus	78.37	0.00e+00	728.00
IUUC-Mdo-062699	Monodelphis domestica	65.68	3.00e-120	424.00
IUUC-Mmu-063270	Mus musculus	69.09	0.00e+00	645.00
IUUC-Mac-065121	Musa acuminata	31.68	4.00e-19	88.60
IUUC-Mpu-065833	Mustela putorius furo	77.05	0.00e+00	752.00
IUUC-Mlu-067479	Myotis lucifugus	70.80	9.00e-149	519.00
IUUC-Ncr-068774	Neurospora crassa	30.08	2.00e-05	43.10
IUUC-Nle-069224	Nomascus leucogenys	76.64	0.00e+00	719.00
IUUC-Opr-070699	Ochotona princeps	61.81	2.00e-145	508.00
IUUC-Ont-072423	Oreochromis niloticus	56.37	4.00e-103	368.00
IUUC-Oan-073554	Ornithorhynchus anatinus	69.57	1.00e-31	127.00
IUUC-Ocu-074946	Oryctolagus cuniculus	88.98	3.00e-131	460.00
IUUC-Oba-075090	Oryza barthii	33.49	4.00e-19	89.70
IUUC-Obr-076066	Oryza brachyantha	32.23	6.00e-17	82.40
IUUC-Ogl-077154	Oryza glaberrima	33.49	4.00e-19	89.70
IUUC-Ogu-077955	Oryza glumaepatula	33.49	3.00e-19	90.10
IUUC-Oin-079055	Oryza indica	33.49	6.00e-19	89.00
IUUC-Olo-080733	Oryza longistaminata	39.64	2.00e-14	74.30
IUUC-Ome-081338	Oryza meridionalis	33.49	4.00e-19	89.70
IUUC-Oni-082257	Oryza nivara	33.49	6.00e-19	89.00
IUUC-Opu-083290	Oryza punctata	32.54	2.00e-18	87.40
IUUC-Oru-084633	Oryza rufipogon	32.54	7.00e-18	85.50
IUUC-Osa-086222	Oryza sativa	33.49	4.00e-19	89.70
IUUC-Ola-087333	Oryzias latipes	45.29	2.00e-104	372.00
IUUC-Olu-087722	Ostreococcus lucimarinus	32.47	5.00e-04	40.40
IUUC-Oga-088956	Otolemur garnettii	77.48	0.00e+00	728.00
IUUC-Oar-090014	Ovis aries	80.53	0.00e+00	749.00
IUUC-Ptr-091565	Pan troglodytes	78.07	0.00e+00	715.00
IUUC-Pan-092756	Papio anubis	79.10	0.00e+00	728.00
IUUC-Psi-093051	Pelodiscus sinensis	52.21	6.00e-102	363.00
IUUC-Pma-094409	Petromyzon marinus	72.39	6.00e-58	215.00
IUUC-Pno-094926	Phaeosphaeria nodorum	35.15	2.00e-49	189.00
IUUC-Ppa-095658	Physcomitrella patens	60.00	9.00e-04	38.10
IUUC-Pfo-096555	Poecilia formosa	56.07	6.00e-100	357.00
IUUC-Pab-098754	Pongo abelii	73.37	4.00e-143	500.00
IUUC-Pca-100166	Procavia capensis	73.47	0.00e+00	717.00
IUUC-Pva-102910	Pteropus vampyrus	68.25	1.00e-179	622.00
IUUC-Pte-104222	Pyrenophora teres	45.27	2.00e-48	186.00
IUUC-Pyt-104688	Pyrenophora triticirepentis	37.63	1.00e-47	183.00
IUUC-Rno-105616	Rattus norvegicus	61.62	6.00e-157	546.00
IUUC-Sha-106669	Sarcophilus harrisii	57.48	2.00e-124	439.00
IUUC-Smo-109048	Selaginella moellendorffii	47.34	8.00e-44	169.00
IUUC-Sit-110221	Setaria italica	27.49	2.00e-17	83.20
IUUC-Sar-113141	Sorex araneus	68.48	0.00e+00	629.00
IUUC-Sbi-114252	Sorghum bicolor	27.64	1.00e-16	80.50
IUUC-Tgu-116997	Taeniopygia guttata	45.44	2.00e-107	382.00
IUUC-Tru-117785	Takifugu rubripes	49.87	5.00e-100	357.00
IUUC-Tsy-119449	Tarsius syrichta	73.56	4.00e-143	500.00
IUUC-Tni-120379	Tetraodon nigroviridis	45.02	2.00e-109	389.00
IUUC-Tre-121886	Trichoderma reesei	33.33	1.00e-04	40.80
IUUC-Tvi-122337	Trichoderma virens	33.71	2.00e-03	36.60
IUUC-Tae-124356	Triticum aestivum	31.88	1.00e-18	88.60
IUUC-Tur-126257	Triticum urartu	29.00	1.00e-19	90.50
IUUC-Tbe-128156	Tupaia belangeri	69.31	0.00e+00	643.00
IUUC-Ttr-128748	Tursiops truncatus	81.43	3.00e-179	620.00
IUUC-Vda-129771	Verticillium dahliae	29.85	3.00e-05	43.10
IUUC-Vpa-130454	Vicugna pacos	69.87	1.00e-82	299.00
IUUC-Xtr-132163	Xenopus tropicalis	46.41	2.00e-106	379.00
IUUC-Xma-134184	Xiphophorus maculatus	61.99	2.00e-104	372.00
IUUC-Zma-134864	Zea mays	28.14	1.00e-17	84.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence