iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115738

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU856210

Gene Name

RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000012419.2	ENSSSCT00000013579.2	ENSSSCP00000013214.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-07	30.7	569	610

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 569  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 610
           9*******5554499****************......**********8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MESSDSNDKG SGDQSAAQRR SQMDRLDREE AFYQFVNNLS EEDYRLMRDN NLLGTPGEST 60
EEELLRRLQQ IKEGPPPQNS DENRGGDSSD DVSNGDSIID WLNSVRQTGN TTRSGQRGNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCATCATCA CTTCCTGTTG TGGGCGGGCG TTTCCTGTCG CTGCTTGGTA ACAATGGGGA 60
AGATAATGGC TGCCTGAGCA ACGTCTGCGA GCAGGCGCTG GGTTAGAGGC GGGTCTCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0060816--P:random inactivation of X chromosome
GO:1900095--P:regulation of dosage compensation by inactivation of X chromosome

KEGG

ssc:100511426; ssc:100738472

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000316	Aegilops tauschii	42.37	5.00e-10	57.00
IUUC-Aml-001407	Ailuropoda melanoleuca	97.09	0.00e+00	719.00
IUUC-Atr-002539	Amborella trichopoda	46.43	1.00e-14	73.90
IUUC-Apl-003969	Anas platyrhynchos	78.22	3.00e-165	574.00
IUUC-Aca-005377	Anolis carolinensis	89.19	8.00e-74	271.00
IUUC-Aly-005870	Arabidopsis lyrata	42.70	3.00e-16	79.00
IUUC-Ath-007543	Arabidopsis thaliana	49.21	4.00e-15	74.30
IUUC-Ame-011097	Astyanax mexicanus	60.83	1.00e-54	207.00
IUUC-Bta-013113	Bos taurus	97.87	0.00e+00	748.00
IUUC-Bdi-014392	Brachypodium distachyon	47.06	2.00e-14	72.00
IUUC-Bol-015085	Brassica oleracea	41.94	6.00e-16	78.20
IUUC-Bra-018013	Brassica rapa	42.86	2.00e-16	79.30
IUUC-Cja-018860	Callithrix jacchus	94.76	0.00e+00	680.00
IUUC-Cfa-020358	Canis familiaris	96.87	0.00e+00	714.00
IUUC-Cpo-021533	Cavia porcellus	93.94	0.00e+00	637.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	9.00e-14	67.40
IUUC-Csa-023242	Chlorocebus sabaeus	93.67	0.00e+00	654.00
IUUC-Cho-024536	Choloepus hoffmanni	87.56	6.00e-174	603.00
IUUC-Cne-026941	Cryptococcus neoformans	34.94	1.00e-10	61.60
IUUC-Cme-027313	Cyanidioschyzon merolae	36.92	2.00e-11	63.50
IUUC-Dre-027894	Danio rerio	85.84	1.00e-59	224.00
IUUC-Dno-029606	Dasypus novemcinctus	94.99	0.00e+00	745.00
IUUC-Dor-031042	Dipodomys ordii	86.58	0.00e+00	639.00
IUUC-Ete-033099	Echinops telfairi	90.50	0.00e+00	660.00
IUUC-Eca-033976	Equus caballus	96.83	0.00e+00	764.00
IUUC-Eeu-034964	Erinaceus europaeus	85.92	9.00e-155	540.00
IUUC-Fca-035662	Felis catus	97.32	0.00e+00	721.00
IUUC-Fal-036996	Ficedula albicollis	78.59	2.00e-158	552.00
IUUC-Gmo-039207	Gadus morhua	76.86	1.00e-47	183.00
IUUC-Gga-040816	Gallus gallus	78.97	3.00e-166	578.00
IUUC-Gac-041767	Gasterosteus aculeatus	84.62	6.00e-54	205.00
IUUC-Gma-044353	Glycine max	47.37	2.00e-16	79.70
IUUC-Ggo-044754	Gorilla gorilla	96.15	0.00e+00	722.00
IUUC-Hsa-045776	Homo sapiens	96.15	0.00e+00	722.00
IUUC-Hvu-047745	Hordeum vulgare	52.94	1.00e-14	74.30
IUUC-Itr-048044	Ictidomys tridecemlineatus	95.24	0.00e+00	722.00
IUUC-Lch-050178	Latimeria chalumnae	67.03	6.00e-131	461.00
IUUC-Lpe-051680	Leersia perrieri	42.86	2.00e-14	73.90
IUUC-Loc-052124	Lepisosteus oculatus	58.44	3.00e-104	372.00
IUUC-Laf-054328	Loxodonta africana	95.01	0.00e+00	713.00
IUUC-Mcc-054739	Macaca mulatta	96.15	0.00e+00	722.00
IUUC-Meu-056359	Macropus eugenii	74.48	0.00e+00	720.00
IUUC-Mpo-057470	Magnaporthe poae	44.44	3.00e-11	63.50
IUUC-Mtr-058167	Medicago truncatula	47.37	2.00e-15	76.60
IUUC-Mga-059838	Meleagris gallopavo	79.50	3.00e-167	581.00
IUUC-Mmr-060608	Microcebus murinus	94.87	0.00e+00	712.00
IUUC-Mdo-061961	Monodelphis domestica	75.45	8.00e-151	526.00
IUUC-Mmu-064278	Mus musculus	86.26	2.00e-167	582.00
IUUC-Mac-065396	Musa acuminata	43.42	1.00e-14	73.20
IUUC-Mpu-066258	Mustela putorius furo	96.29	2.00e-169	588.00
IUUC-Mlu-066930	Myotis lucifugus	96.37	0.00e+00	765.00
IUUC-Nle-069311	Nomascus leucogenys	96.31	0.00e+00	944.00
IUUC-Opr-071124	Ochotona princeps	92.23	4.00e-88	318.00
IUUC-Ont-071511	Oreochromis niloticus	83.18	2.00e-54	206.00
IUUC-Oan-073036	Ornithorhynchus anatinus	74.71	6.00e-152	530.00
IUUC-Ocu-073795	Oryctolagus cuniculus	93.51	0.00e+00	665.00
IUUC-Oba-075403	Oryza barthii	42.86	2.00e-14	73.90
IUUC-Obr-076503	Oryza brachyantha	42.86	2.00e-14	73.20
IUUC-Ogl-077574	Oryza glaberrima	42.86	2.00e-14	73.90
IUUC-Ogu-077986	Oryza glumaepatula	42.86	2.00e-14	73.90
IUUC-Oin-079091	Oryza indica	42.86	2.00e-14	73.90
IUUC-Olo-080996	Oryza longistaminata	37.63	6.00e-14	71.60
IUUC-Ome-081627	Oryza meridionalis	42.86	1.00e-14	73.90
IUUC-Oni-082260	Oryza nivara	42.86	2.00e-14	73.90
IUUC-Opu-083578	Oryza punctata	42.86	2.00e-14	73.90
IUUC-Oru-084794	Oryza rufipogon	42.86	2.00e-14	73.90
IUUC-Osa-085348	Oryza sativa	42.86	2.00e-14	73.90
IUUC-Ola-087461	Oryzias latipes	88.17	1.00e-49	191.00
IUUC-Olu-087781	Ostreococcus lucimarinus	40.30	7.00e-13	66.20
IUUC-Oga-088022	Otolemur garnettii	95.13	0.00e+00	739.00
IUUC-Oar-089348	Ovis aries	97.39	0.00e+00	739.00
IUUC-Ptr-090604	Pan troglodytes	95.70	0.00e+00	720.00
IUUC-Pan-092322	Papio anubis	96.15	0.00e+00	722.00
IUUC-Psi-093936	Pelodiscus sinensis	74.61	7.00e-152	530.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	2.00e-16	80.90
IUUC-Pfo-096616	Poecilia formosa	89.13	1.00e-49	191.00
IUUC-Pab-098671	Pongo abelii	96.15	0.00e+00	723.00
IUUC-Pop-099808	Populus trichocarpa	45.95	7.00e-16	77.80
IUUC-Pca-100263	Procavia capensis	93.51	0.00e+00	696.00
IUUC-Ppe-101202	Prunus persica	45.59	3.00e-15	76.60
IUUC-Pva-102709	Pteropus vampyrus	95.01	0.00e+00	675.00
IUUC-Ptt-103976	Puccinia triticina	43.75	1.00e-10	59.30
IUUC-Rno-105759	Rattus norvegicus	88.84	5.00e-175	607.00
IUUC-Sha-106792	Sarcophilus harrisii	76.65	7.00e-137	480.00
IUUC-Smo-109572	Selaginella moellendorffii	44.09	1.00e-15	75.90
IUUC-Sit-109852	Setaria italica	42.86	2.00e-14	73.60
IUUC-Sly-111747	Solanum lycopersicum	62.86	1.00e-12	67.40
IUUC-Stu-112609	Solanum tuberosum	47.22	2.00e-16	79.70
IUUC-Sar-113271	Sorex araneus	85.81	9.00e-178	616.00
IUUC-Sbi-114435	Sorghum bicolor	44.16	2.00e-14	73.60
IUUC-Tgu-117205	Taeniopygia guttata	77.30	2.00e-158	551.00
IUUC-Tru-118123	Takifugu rubripes	86.67	6.00e-55	208.00
IUUC-Tsy-119421	Tarsius syrichta	96.42	0.00e+00	778.00
IUUC-Tni-120299	Tetraodon nigroviridis	83.19	5.00e-56	212.00
IUUC-Tca-121367	Theobroma cacao	47.37	2.00e-16	79.70
IUUC-Tae-123264	Triticum aestivum	35.29	1.00e-15	77.00
IUUC-Tur-126084	Triticum urartu	42.86	2.00e-13	72.00
IUUC-Tbe-127543	Tupaia belangeri	95.53	0.00e+00	763.00
IUUC-Vpa-130058	Vicugna pacos	98.43	0.00e+00	732.00
IUUC-Vvi-131093	Vitis vinifera	47.37	1.00e-16	80.50
IUUC-Xtr-132663	Xenopus tropicalis	61.39	1.00e-107	383.00
IUUC-Xma-133076	Xiphophorus maculatus	81.42	3.00e-56	213.00
IUUC-Yli-134448	Yarrowia lipolytica	34.12	4.00e-10	57.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence