iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006506

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_908577

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_600634.1	scaffold_600634.1	scaffold_600634.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-07	31.4	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+  +d  +vlp C+H+fh +C+  w       + + +CP+Cr
   Q: 129  CSICLADYkkMDMIRVLPdCNHLFHDTCVDPW------LRLHPTCPVCR 171
           ********76555899999*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNATVVPPYS GHWLTNTDRM GGLAYGIGVS IGILMLITTI TLTSYYCTRS HISASPTTTP 60
RTRRRRRETN GTLQPGQDQF DFEGDENDTV VVEVMGLNEE VIKSFPKLPY EEARVSYSLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAATTC TGACCGTCGT AATGAATGCG ACGGTGGTGC CACCTTACTC CGGCCACTGG 60
CTAACGAACA CAGATAGGAT GGGTGGATTG GCTTACGGGA TAGGAGTCTC CATTGGTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_908577

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002979	Amborella trichopoda	58.23	5.00e-25	105.00
IUUC-Ath-007122	Arabidopsis thaliana	94.42	3.00e-81	293.00
IUUC-Bdi-014078	Brachypodium distachyon	54.64	3.00e-22	97.40
IUUC-Bol-015155	Brassica oleracea	75.90	3.00e-72	263.00
IUUC-Bra-017974	Brassica rapa	77.44	5.00e-74	269.00
IUUC-Cpo-021302	Cavia porcellus	49.12	2.00e-13	68.60
IUUC-Ete-032463	Echinops telfairi	49.12	2.00e-13	69.30
IUUC-Mdo-062435	Monodelphis domestica	47.46	2.00e-13	69.30
IUUC-Mlu-067534	Myotis lucifugus	49.12	2.00e-13	68.90
IUUC-Ogl-077901	Oryza glaberrima	50.96	3.00e-18	84.00
IUUC-Ogu-078903	Oryza glumaepatula	51.58	3.00e-19	87.00
IUUC-Oin-079366	Oryza indica	51.92	9.00e-19	85.90
IUUC-Oni-082925	Oryza nivara	50.96	3.00e-18	84.00
IUUC-Opu-083948	Oryza punctata	53.61	4.00e-20	90.10
IUUC-Oru-085270	Oryza rufipogon	49.04	4.00e-19	87.40
IUUC-Osa-085759	Oryza sativa	49.04	4.00e-19	87.40
IUUC-Pan-091866	Papio anubis	40.00	2.00e-13	68.90
IUUC-Sha-106655	Sarcophilus harrisii	47.46	1.00e-13	68.90
IUUC-Sit-110656	Setaria italica	42.76	3.00e-23	100.00
IUUC-Stu-112602	Solanum tuberosum	56.03	2.00e-31	127.00
IUUC-Sar-113043	Sorex araneus	49.12	2.00e-13	68.90
IUUC-Ssc-116062	Sus scrofa	49.12	2.00e-13	68.60
IUUC-Tgu-117497	Taeniopygia guttata	49.12	4.00e-13	68.60
IUUC-Tca-121049	Theobroma cacao	66.04	7.00e-32	129.00
IUUC-Tae-125155	Triticum aestivum	37.35	7.00e-23	99.40
IUUC-Tur-125993	Triticum urartu	38.46	2.00e-23	102.00
IUUC-Tbe-127574	Tupaia belangeri	49.12	4.00e-13	67.80
IUUC-Ttr-128435	Tursiops truncatus	49.12	2.00e-13	69.30
IUUC-Vpa-130737	Vicugna pacos	49.12	2.00e-13	68.90
IUUC-Xtr-132504	Xenopus tropicalis	49.12	5.00e-13	68.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence