iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001774

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01049442

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000002100.1	ENSAMET00000002323.1	ENSAMEP00000002230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.30e-11	41.9	468	535
E3 activity/RING/RING	3.00e-08	34.2	471	509

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawc 69
           ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l    ++++   n  + +li +++
   Q: 468  DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGLaqclASRKYSKNVIMEELIAKFL 535
           678*********************************9.****976643337778888888888888876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+  f + p+++pCgH+f+++Cl++          +++CPlC+
   Q: 471  CALCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 509
           ****999977.***************999......9*********7 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MDSLQTGQML SLPAELGGNN LELAEPATSA ARVDMGPQPE AATEGSAPLA TREPEPGPEE 60
QPPSTPTPEC KVLLEQADAL ASGGRLREAF EVYRQLSERQ QLVAEQLEQL VRCLAQNVPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCAC TTCAGACTGG ACAGATGCTG AGCTTGCCCG CCGAGCTCGG CGGCAACAAC 60
TTAGAACTGG CGGAGCCGGC GACATCCGCG GCCCGCGTCG ACATGGGCCC CCAGCCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000755	Aegilops tauschii	28.42	6.00e-11	62.00
IUUC-Apl-003916	Anas platyrhynchos	59.69	3.00e-175	607.00
IUUC-Ani-009473	Aspergillus nidulans	29.94	7.00e-41	162.00
IUUC-Ang-009643	Aspergillus niger	27.96	8.00e-38	151.00
IUUC-Bta-012872	Bos taurus	78.66	0.00e+00	1053.00
IUUC-Cel-018356	Caenorhabditis elegans	31.33	2.00e-10	58.50
IUUC-Cja-018747	Callithrix jacchus	71.73	0.00e+00	922.00
IUUC-Cfa-020101	Canis familiaris	82.73	0.00e+00	1058.00
IUUC-Cpo-022041	Cavia porcellus	73.77	0.00e+00	970.00
IUUC-Csa-024034	Chlorocebus sabaeus	78.65	0.00e+00	1055.00
IUUC-Cin-025668	Ciona intestinalis	33.48	1.00e-93	337.00
IUUC-Csv-026364	Ciona savignyi	45.85	6.00e-79	287.00
IUUC-Dno-029518	Dasypus novemcinctus	69.74	0.00e+00	901.00
IUUC-Dor-031132	Dipodomys ordii	62.96	0.00e+00	897.00
IUUC-Dse-031331	Dothistroma septosporum	31.30	7.00e-40	158.00
IUUC-Eca-033382	Equus caballus	80.83	0.00e+00	1107.00
IUUC-Fca-035777	Felis catus	82.14	0.00e+00	759.00
IUUC-Fal-036730	Ficedula albicollis	61.16	0.00e+00	659.00
IUUC-Fso-038334	Fusarium solani	41.87	3.00e-40	159.00
IUUC-Gmo-039110	Gadus morhua	45.92	3.00e-166	578.00
IUUC-Gga-041187	Gallus gallus	55.23	0.00e+00	764.00
IUUC-Gac-042201	Gasterosteus aculeatus	46.28	9.00e-174	603.00
IUUC-Ggo-045111	Gorilla gorilla	78.69	0.00e+00	1053.00
IUUC-Hsa-045695	Homo sapiens	78.56	0.00e+00	1050.00
IUUC-Hvu-047145	Hordeum vulgare	40.71	4.00e-25	108.00
IUUC-Lch-050429	Latimeria chalumnae	50.47	0.00e+00	697.00
IUUC-Loc-051823	Lepisosteus oculatus	48.98	3.00e-178	618.00
IUUC-Lma-053145	Leptosphaeria maculans	28.87	2.00e-43	170.00
IUUC-Laf-053434	Loxodonta africana	82.16	0.00e+00	794.00
IUUC-Mcc-055249	Macaca mulatta	79.21	0.00e+00	744.00
IUUC-Mor-056963	Magnaporthe oryzae	28.90	1.00e-41	164.00
IUUC-Mga-060131	Meleagris gallopavo	62.15	0.00e+00	627.00
IUUC-Mmr-060749	Microcebus murinus	77.85	0.00e+00	1065.00
IUUC-Mdo-062261	Monodelphis domestica	51.80	0.00e+00	696.00
IUUC-Mmu-063219	Mus musculus	73.77	0.00e+00	964.00
IUUC-Mpu-066222	Mustela putorius furo	84.44	0.00e+00	1083.00
IUUC-Mlu-067769	Myotis lucifugus	75.95	0.00e+00	1028.00
IUUC-Nle-069738	Nomascus leucogenys	80.00	0.00e+00	846.00
IUUC-Ont-072029	Oreochromis niloticus	55.73	4.00e-164	571.00
IUUC-Oan-073179	Ornithorhynchus anatinus	76.62	2.00e-166	578.00
IUUC-Ocu-074884	Oryctolagus cuniculus	75.52	0.00e+00	974.00
IUUC-Ogl-077658	Oryza glaberrima	32.73	7.00e-12	65.10
IUUC-Ome-081482	Oryza meridionalis	32.20	1.00e-11	64.30
IUUC-Osa-085978	Oryza sativa	32.73	8.00e-12	64.70
IUUC-Ola-086698	Oryzias latipes	45.49	5.00e-166	578.00
IUUC-Oga-089109	Otolemur garnettii	76.89	0.00e+00	991.00
IUUC-Oar-089903	Ovis aries	78.53	0.00e+00	1070.00
IUUC-Ptr-091238	Pan troglodytes	77.88	0.00e+00	1038.00
IUUC-Pan-092379	Papio anubis	73.90	0.00e+00	1038.00
IUUC-Psi-093418	Pelodiscus sinensis	57.12	0.00e+00	651.00
IUUC-Pma-094231	Petromyzon marinus	63.60	2.00e-109	388.00
IUUC-Pno-094889	Phaeosphaeria nodorum	31.80	1.00e-41	163.00
IUUC-Pfo-097284	Poecilia formosa	45.80	5.00e-168	584.00
IUUC-Pab-098343	Pongo abelii	72.93	0.00e+00	1019.00
IUUC-Pca-100905	Procavia capensis	71.32	0.00e+00	842.00
IUUC-Pva-102242	Pteropus vampyrus	73.47	0.00e+00	967.00
IUUC-Pte-104214	Pyrenophora teres	31.21	3.00e-40	159.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	31.52	4.00e-40	159.00
IUUC-Rno-105899	Rattus norvegicus	68.27	0.00e+00	961.00
IUUC-Sha-107565	Sarcophilus harrisii	50.28	0.00e+00	659.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	34.74	4.00e-30	125.00
IUUC-Spo-108344	Schizosaccharomyces pombe	34.52	9.00e-25	108.00
IUUC-Sar-112999	Sorex araneus	56.45	1.00e-167	583.00
IUUC-Ssc-115705	Sus scrofa	79.69	0.00e+00	1075.00
IUUC-Tgu-116978	Taeniopygia guttata	60.13	0.00e+00	728.00
IUUC-Tsy-118988	Tarsius syrichta	87.93	0.00e+00	889.00
IUUC-Tbe-127563	Tupaia belangeri	68.14	2.00e-138	484.00
IUUC-Ttr-128875	Tursiops truncatus	78.40	0.00e+00	981.00
IUUC-Vpa-130779	Vicugna pacos	95.12	3.00e-159	554.00
IUUC-Xtr-132508	Xenopus tropicalis	49.44	0.00e+00	674.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence