iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002401

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01036683

Gene Name

RNF139

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000015889.1	ENSAMET00000017451.1	ENSAMEP00000016761.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-08	35.2	545	583

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           CaiC+ +f +  +++pC+H fha Cl kw       + +++CP C
   Q: 545  CAICYHEFTTSARITPCNHYFHALCLRKW------LYIQDTCPMC 583
           ********999******************......********** PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

XVGPPQQQVR MAHQQVWAAL EVALRVPCLY IIDAIFNSYY DSSQSRFCIG LQIFLRLLGI 60
FVSSIVLILS QRSLFKFYMY SSAFLLAATS VLVNYYASLH IDFYGAYNTS AFGIELLPRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNGGTGGGGC CCCCGCAGCA GCAGGTGCGG ATGGCCCATC AGCAGGTCTG GGCGGCGCTC 60
GAGGTGGCGC TCCGGGTGCC CTGCCTCTAC ATCATCGACG CCATCTTCAA CTCCTACTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025754--TRC8_N_dom
IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13705--TRC8_N
PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0036503--P:ERAD pathway
GO:0008285--P:negative regulation of cell proliferation
GO:0017148--P:negative regulation of translation
GO:2000060--P:positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0031648--P:protein destabilization
GO:0060628--P:regulation of ER to Golgi vesicle-mediated transport
GO:0070613--P:regulation of protein processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004214	Anas platyrhynchos	85.87	0.00e+00	968.00
IUUC-Aca-005326	Anolis carolinensis	78.65	0.00e+00	972.00
IUUC-Ame-011687	Astyanax mexicanus	74.08	0.00e+00	872.00
IUUC-Bta-013394	Bos taurus	97.58	0.00e+00	1255.00
IUUC-Bci-013813	Botrytis cinerea	41.38	8.00e-08	51.60
IUUC-Cja-019499	Callithrix jacchus	96.67	0.00e+00	1264.00
IUUC-Cfa-020357	Canis familiaris	98.94	0.00e+00	1235.00
IUUC-Cpo-021924	Cavia porcellus	95.74	0.00e+00	1162.00
IUUC-Csa-023513	Chlorocebus sabaeus	97.88	0.00e+00	1249.00
IUUC-Cho-024285	Choloepus hoffmanni	91.09	0.00e+00	1088.00
IUUC-Cin-025223	Ciona intestinalis	53.56	3.00e-74	271.00
IUUC-Csv-026018	Ciona savignyi	47.32	3.00e-64	238.00
IUUC-Dre-028660	Danio rerio	72.74	0.00e+00	794.00
IUUC-Dno-029463	Dasypus novemcinctus	97.29	5.00e-166	577.00
IUUC-Dor-030728	Dipodomys ordii	95.25	0.00e+00	1116.00
IUUC-Dse-031284	Dothistroma septosporum	43.40	6.00e-09	54.70
IUUC-Dme-032186	Drosophila melanogaster	44.49	6.00e-99	355.00
IUUC-Ete-032368	Echinops telfairi	89.01	0.00e+00	1167.00
IUUC-Eca-034325	Equus caballus	97.28	0.00e+00	1191.00
IUUC-Fca-035537	Felis catus	96.94	0.00e+00	1192.00
IUUC-Fal-037459	Ficedula albicollis	85.66	0.00e+00	944.00
IUUC-Gmo-039442	Gadus morhua	78.28	2.00e-98	352.00
IUUC-Ggr-039921	Gaeumannomyces graminis	31.91	6.00e-08	53.10
IUUC-Gga-041071	Gallus gallus	82.54	0.00e+00	991.00
IUUC-Gac-042483	Gasterosteus aculeatus	70.77	0.00e+00	896.00
IUUC-Ggo-044672	Gorilla gorilla	97.58	0.00e+00	1246.00
IUUC-Hsa-045836	Homo sapiens	96.82	0.00e+00	1209.00
IUUC-Itr-048588	Ictidomys tridecemlineatus	96.65	0.00e+00	1251.00
IUUC-Lch-050073	Latimeria chalumnae	74.39	0.00e+00	973.00
IUUC-Loc-052908	Lepisosteus oculatus	74.79	0.00e+00	944.00
IUUC-Lma-053202	Leptosphaeria maculans	42.59	3.00e-08	52.40
IUUC-Laf-053519	Loxodonta africana	94.56	0.00e+00	1256.00
IUUC-Mcc-054674	Macaca mulatta	97.45	1.00e-105	375.00
IUUC-Mor-057262	Magnaporthe oryzae	32.93	3.00e-08	54.30
IUUC-Mpo-057601	Magnaporthe poae	34.15	3.00e-07	50.10
IUUC-Mga-059922	Meleagris gallopavo	85.74	0.00e+00	958.00
IUUC-Mmr-061452	Microcebus murinus	96.68	0.00e+00	1207.00
IUUC-Mdo-062412	Monodelphis domestica	90.58	0.00e+00	1174.00
IUUC-Mmu-063147	Mus musculus	94.29	0.00e+00	1207.00
IUUC-Mpu-065929	Mustela putorius furo	98.79	0.00e+00	1234.00
IUUC-Mlu-067899	Myotis lucifugus	94.11	0.00e+00	1201.00
IUUC-Nle-070083	Nomascus leucogenys	97.58	0.00e+00	1244.00
IUUC-Opr-070461	Ochotona princeps	91.87	0.00e+00	1209.00
IUUC-Ont-072256	Oreochromis niloticus	70.00	0.00e+00	914.00
IUUC-Oan-073150	Ornithorhynchus anatinus	84.72	0.00e+00	935.00
IUUC-Ocu-073748	Oryctolagus cuniculus	93.83	0.00e+00	1194.00
IUUC-Oga-088565	Otolemur garnettii	96.96	0.00e+00	1233.00
IUUC-Oar-089432	Ovis aries	97.68	0.00e+00	1168.00
IUUC-Ptr-091422	Pan troglodytes	97.43	0.00e+00	1244.00
IUUC-Pan-092331	Papio anubis	97.73	0.00e+00	1247.00
IUUC-Psi-092933	Pelodiscus sinensis	83.73	0.00e+00	938.00
IUUC-Pfo-097466	Poecilia formosa	69.80	0.00e+00	912.00
IUUC-Pab-098702	Pongo abelii	97.43	0.00e+00	1246.00
IUUC-Pca-100125	Procavia capensis	92.13	0.00e+00	1199.00
IUUC-Pva-102628	Pteropus vampyrus	97.58	0.00e+00	1216.00
IUUC-Rno-104886	Rattus norvegicus	94.36	0.00e+00	1224.00
IUUC-Sha-106702	Sarcophilus harrisii	88.31	0.00e+00	1152.00
IUUC-Ssc-116164	Sus scrofa	96.83	0.00e+00	1263.00
IUUC-Tgu-116829	Taeniopygia guttata	83.70	0.00e+00	978.00
IUUC-Tru-118557	Takifugu rubripes	70.22	0.00e+00	872.00
IUUC-Tsy-119399	Tarsius syrichta	91.48	0.00e+00	671.00
IUUC-Tni-120006	Tetraodon nigroviridis	63.91	0.00e+00	759.00
IUUC-Tbe-127664	Tupaia belangeri	95.76	0.00e+00	1221.00
IUUC-Ttr-129144	Tursiops truncatus	96.98	0.00e+00	1278.00
IUUC-Vpa-130226	Vicugna pacos	97.58	0.00e+00	1250.00
IUUC-Xtr-132461	Xenopus tropicalis	71.56	0.00e+00	906.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence