iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069320

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01124571

Gene Name

RNF40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000016037.2	ENSNLET00000020429.2	ENSNLEP00000019444.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	47.65	1.00e-117	421.00	IUUC-Dme-032034
E3 activity/RING/RING	98.52	0.00e+00	884.00	IUUC-Hsa-045732
E3 activity/RING/RING	93.14	0.00e+00	834.00	IUUC-Rno-105165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK VLQFKNKKLA 60
ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ LDETVEALLR CHEGQGELSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGACGGAAG TACCGCCTCC TCCCGTCTGA CGCCCCTCAG GGGACCCTGC GCCGCTCCAG 60
CCGCCGCGGC CATGTCTGGG CCAGGCAACA AACGCGCCGC CGGCGACGGG GGCTCAGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Gene Ontology

GO:0033503--C:HULC complex
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0003730--F:mRNA 3'-UTR binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001027	Aegilops tauschii	26.34	5.00e-13	69.70
IUUC-Aml-002295	Ailuropoda melanoleuca	97.40	0.00e+00	878.00
IUUC-Aly-006055	Arabidopsis lyrata	31.33	2.00e-10	61.60
IUUC-Bta-013173	Bos taurus	94.62	0.00e+00	847.00
IUUC-Cja-019042	Callithrix jacchus	96.66	0.00e+00	840.00
IUUC-Cfa-020318	Canis familiaris	97.40	0.00e+00	878.00
IUUC-Cpo-021539	Cavia porcellus	96.10	0.00e+00	874.00
IUUC-Csa-024051	Chlorocebus sabaeus	99.44	0.00e+00	853.00
IUUC-Dno-028892	Dasypus novemcinctus	95.73	0.00e+00	821.00
IUUC-Dme-032034	Drosophila melanogaster	47.68	7.00e-119	421.00
IUUC-Ete-032505	Echinops telfairi	92.11	0.00e+00	641.00
IUUC-Eca-033436	Equus caballus	97.03	0.00e+00	902.00
IUUC-Eeu-035291	Erinaceus europaeus	87.55	0.00e+00	761.00
IUUC-Fca-035720	Felis catus	96.29	0.00e+00	877.00
IUUC-Ggo-045426	Gorilla gorilla	98.70	0.00e+00	884.00
IUUC-Hsa-045732	Homo sapiens	98.52	0.00e+00	923.00
IUUC-Itr-048724	Ictidomys tridecemlineatus	96.66	0.00e+00	860.00
IUUC-Laf-054267	Loxodonta africana	95.55	0.00e+00	862.00
IUUC-Mcc-055240	Macaca mulatta	99.44	0.00e+00	854.00
IUUC-Meu-056750	Macropus eugenii	80.70	0.00e+00	669.00
IUUC-Mmr-061177	Microcebus murinus	96.29	0.00e+00	859.00
IUUC-Mdo-062415	Monodelphis domestica	80.40	0.00e+00	696.00
IUUC-Mmu-063981	Mus musculus	93.32	0.00e+00	857.00
IUUC-Mpu-066498	Mustela putorius furo	95.18	0.00e+00	794.00
IUUC-Mlu-067242	Myotis lucifugus	94.81	0.00e+00	856.00
IUUC-Opr-070286	Ochotona princeps	91.35	1.00e-144	507.00
IUUC-Ocu-073799	Oryctolagus cuniculus	95.36	0.00e+00	855.00
IUUC-Oga-089016	Otolemur garnettii	96.10	0.00e+00	832.00
IUUC-Oar-089589	Ovis aries	95.36	0.00e+00	858.00
IUUC-Ptr-090530	Pan troglodytes	99.21	0.00e+00	795.00
IUUC-Pan-092502	Papio anubis	99.44	0.00e+00	857.00
IUUC-Pab-098619	Pongo abelii	99.26	0.00e+00	893.00
IUUC-Pca-100544	Procavia capensis	93.88	0.00e+00	852.00
IUUC-Pva-102479	Pteropus vampyrus	96.84	0.00e+00	830.00
IUUC-Ptt-104014	Puccinia triticina	27.03	1.00e-05	45.40
IUUC-Rno-105165	Rattus norvegicus	93.14	0.00e+00	835.00
IUUC-Sha-107602	Sarcophilus harrisii	83.36	0.00e+00	715.00
IUUC-Sar-113755	Sorex araneus	93.31	0.00e+00	813.00
IUUC-Ssc-116134	Sus scrofa	93.51	0.00e+00	858.00
IUUC-Tsy-119065	Tarsius syrichta	89.98	0.00e+00	791.00
IUUC-Tni-120790	Tetraodon nigroviridis	58.03	3.00e-136	479.00
IUUC-Tbe-127597	Tupaia belangeri	85.05	0.00e+00	769.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence