iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048988

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01124380

Gene Name

RNF170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000025455.1	ENSSTOT00000023698.1	ENSSTOP00000023034.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-06	26.5	87	130

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskef....rCPlCr 46
           C+iCl   +  p+ ++CgH+f+ +C+   w       ++++    +CP+Cr
   Q: 87   CPICLHQASL-PVETNCGHLFCGTCIiAYW------RYGSWlgaiSCPICR 130
           ****998888.999***********97777......5555533337****8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MARYQGEVQS LKLDDDSVIE GVSDQVLVAV VVSFTLIATL VYALFRNVHQ NIHPENQELV 60
RVLREQLQTE QDAPAATRQQ FYTDMYCPIC LHQASLPVET NCGHLFCGTC IIAYWRYGSW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGTTGCCCT GGAGGGGTGG CGGGGGCATC CCCCGGAAAT AATCTTTAAT CTCCGCCACC 60
AGGAATTGTT GAGGTAGTCC CCTGCGGTGG AGAGGTACGC GCCCCCACTT CCCGACACGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR010652--DUF1232
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF06803--DUF1232
PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000837	Aegilops tauschii	35.12	5.00e-22	97.10
IUUC-Aml-002276	Ailuropoda melanoleuca	95.35	2.00e-124	437.00
IUUC-Atr-003163	Amborella trichopoda	38.07	8.00e-29	119.00
IUUC-Apl-003771	Anas platyrhynchos	77.13	2.00e-100	358.00
IUUC-Aca-004706	Anolis carolinensis	75.97	1.00e-95	342.00
IUUC-Aly-006202	Arabidopsis lyrata	40.00	8.00e-20	89.40
IUUC-Ath-007325	Arabidopsis thaliana	35.50	9.00e-26	109.00
IUUC-Ame-011453	Astyanax mexicanus	68.60	2.00e-96	345.00
IUUC-Bta-013272	Bos taurus	94.59	1.00e-120	425.00
IUUC-Bdi-014259	Brachypodium distachyon	35.43	5.00e-26	110.00
IUUC-Bol-016302	Brassica oleracea	34.48	6.00e-26	109.00
IUUC-Bra-017738	Brassica rapa	34.91	1.00e-25	108.00
IUUC-Cel-018593	Caenorhabditis elegans	33.33	4.00e-26	111.00
IUUC-Cja-019253	Callithrix jacchus	96.90	5.00e-126	442.00
IUUC-Cfa-020844	Canis familiaris	95.72	1.00e-124	440.00
IUUC-Cpo-021645	Cavia porcellus	96.12	5.00e-125	439.00
IUUC-Csa-024012	Chlorocebus sabaeus	97.29	8.00e-127	445.00
IUUC-Cho-024304	Choloepus hoffmanni	75.58	1.00e-90	325.00
IUUC-Cin-025256	Ciona intestinalis	45.95	2.00e-57	215.00
IUUC-Dre-028166	Danio rerio	68.49	1.00e-79	289.00
IUUC-Dno-029494	Dasypus novemcinctus	94.96	7.00e-124	436.00
IUUC-Dor-030259	Dipodomys ordii	95.74	1.00e-124	439.00
IUUC-Ete-032614	Echinops telfairi	82.95	4.00e-98	350.00
IUUC-Eca-033557	Equus caballus	94.96	3.00e-123	433.00
IUUC-Eeu-035324	Erinaceus europaeus	98.88	3.00e-31	128.00
IUUC-Fca-035812	Felis catus	94.96	3.00e-123	434.00
IUUC-Fal-036654	Ficedula albicollis	81.40	3.00e-109	387.00
IUUC-Gmo-039635	Gadus morhua	66.92	2.00e-91	328.00
IUUC-Gga-040345	Gallus gallus	81.01	3.00e-109	387.00
IUUC-Gac-041668	Gasterosteus aculeatus	66.67	2.00e-89	321.00
IUUC-Gma-043890	Glycine max	30.81	4.00e-26	110.00
IUUC-Ggo-045000	Gorilla gorilla	97.29	8.00e-127	445.00
IUUC-Hsa-046691	Homo sapiens	97.29	6.00e-127	446.00
IUUC-Hvu-047464	Hordeum vulgare	36.00	1.00e-26	112.00
IUUC-Lch-049846	Latimeria chalumnae	78.45	2.00e-61	228.00
IUUC-Loc-051785	Lepisosteus oculatus	70.45	2.00e-107	381.00
IUUC-Laf-054542	Loxodonta africana	91.09	2.00e-116	411.00
IUUC-Mcc-055234	Macaca mulatta	97.29	8.00e-127	445.00
IUUC-Meu-056544	Macropus eugenii	70.16	2.00e-75	275.00
IUUC-Mtr-057996	Medicago truncatula	32.89	1.00e-18	85.90
IUUC-Mmr-060609	Microcebus murinus	96.12	1.00e-132	464.00
IUUC-Mdo-062853	Monodelphis domestica	87.98	2.00e-119	421.00
IUUC-Mmu-064383	Mus musculus	90.31	7.00e-111	392.00
IUUC-Mac-065250	Musa acuminata	36.42	1.00e-27	115.00
IUUC-Mlu-067410	Myotis lucifugus	93.80	4.00e-122	430.00
IUUC-Nle-069537	Nomascus leucogenys	97.13	2.00e-84	304.00
IUUC-Opr-070637	Ochotona princeps	94.00	1.00e-65	243.00
IUUC-Ont-071800	Oreochromis niloticus	66.79	5.00e-85	306.00
IUUC-Oan-073190	Ornithorhynchus anatinus	87.98	2.00e-119	421.00
IUUC-Ocu-073899	Oryctolagus cuniculus	95.74	3.00e-124	437.00
IUUC-Obr-076075	Oryza brachyantha	36.59	4.00e-24	103.00
IUUC-Oin-079850	Oryza indica	36.36	3.00e-24	104.00
IUUC-Ome-081191	Oryza meridionalis	37.06	1.00e-23	102.00
IUUC-Oni-082886	Oryza nivara	36.36	2.00e-24	104.00
IUUC-Oru-085126	Oryza rufipogon	31.13	1.00e-09	58.20
IUUC-Osa-085833	Oryza sativa	36.36	3.00e-24	104.00
IUUC-Ola-086372	Oryzias latipes	68.32	8.00e-89	319.00
IUUC-Oga-087988	Otolemur garnettii	96.51	5.00e-122	429.00
IUUC-Oar-089976	Ovis aries	94.59	7.00e-121	426.00
IUUC-Ptr-091377	Pan troglodytes	96.90	1.00e-126	445.00
IUUC-Pan-092348	Papio anubis	96.90	4.00e-126	443.00
IUUC-Psi-092982	Pelodiscus sinensis	80.23	1.00e-101	362.00
IUUC-Ppa-095627	Physcomitrella patens	31.91	3.00e-23	101.00
IUUC-Pfo-096366	Poecilia formosa	67.05	4.00e-86	310.00
IUUC-Pab-098242	Pongo abelii	98.12	3.00e-109	387.00
IUUC-Pop-099622	Populus trichocarpa	29.71	2.00e-21	95.50
IUUC-Pca-100637	Procavia capensis	98.88	2.00e-30	125.00
IUUC-Ppe-101586	Prunus persica	34.09	2.00e-15	74.30
IUUC-Pva-102627	Pteropus vampyrus	94.57	1.00e-130	459.00
IUUC-Rno-105344	Rattus norvegicus	91.09	4.00e-115	406.00
IUUC-Sha-107420	Sarcophilus harrisii	86.49	2.00e-117	414.00
IUUC-Smo-109218	Selaginella moellendorffii	32.56	2.00e-26	111.00
IUUC-Sly-111612	Solanum lycopersicum	32.39	9.00e-19	87.00
IUUC-Stu-112127	Solanum tuberosum	36.31	1.00e-22	99.00
IUUC-Sar-113762	Sorex araneus	93.41	3.00e-121	427.00
IUUC-Sbi-113997	Sorghum bicolor	33.91	2.00e-24	105.00
IUUC-Ssc-115764	Sus scrofa	98.86	3.00e-30	122.00
IUUC-Tgu-116969	Taeniopygia guttata	81.78	6.00e-110	389.00
IUUC-Tru-118414	Takifugu rubripes	69.96	6.00e-82	296.00
IUUC-Tsy-119312	Tarsius syrichta	86.82	3.00e-114	404.00
IUUC-Tni-120687	Tetraodon nigroviridis	72.13	8.00e-86	309.00
IUUC-Tca-121028	Theobroma cacao	35.47	2.00e-18	84.70
IUUC-Tae-122873	Triticum aestivum	37.76	5.00e-26	110.00
IUUC-Tur-126558	Triticum urartu	35.76	3.00e-20	90.50
IUUC-Tbe-127751	Tupaia belangeri	87.60	8.00e-106	376.00
IUUC-Ttr-128731	Tursiops truncatus	85.66	1.00e-110	392.00
IUUC-Vpa-130187	Vicugna pacos	94.96	5.00e-124	436.00
IUUC-Vvi-131393	Vitis vinifera	36.63	2.00e-24	104.00
IUUC-Xtr-132512	Xenopus tropicalis	70.00	2.00e-92	331.00
IUUC-Xma-133203	Xiphophorus maculatus	67.43	1.00e-86	312.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence