iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069310

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01053580

Gene Name

TRIM13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000003779.1	ENSNLET00000004793.1	ENSNLEP00000004556.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-08	34.6	10	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iC++ f+d p+vlpC H f+++Cl+ +    +  +      f+CP+Cr
   Q: 10   CPICCSLFDD-PRVLPCSHNFCKKCLEGIlegsVRNSLWRPAPFKCPTCR 58
           ********99.**************97776666666666999999****8 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MELLEEDLTC PICCSLFDDP RVLPCSHNFC KKCLEGILEG SVRNSLWRPA PFKCPTCRKE 60
TSATGINSLQ VNYSLKGIVE KYNKIKISPK MPVCKGHLGQ PLNIFCLTDM QLICGICATR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTGAGGC TGTGCTTGGC GCGTACCGTG CGGTTCCTGT AGCTGGAGGA CGGGCGGTCG 60
CGCGGCCTCT CCCACTCGCC GGAGGTCGGA GATAAGTACC CGCCGCCCGG CTCCTCTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0016021--C:integral component of membrane
GO:0097038--C:perinuclear endoplasmic reticulum
GO:0004871--F:signal transducer activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:1902187--P:negative regulation of viral release from host cell
GO:0032897--P:negative regulation of viral transcription
GO:0010942--P:positive regulation of cell death
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0016239--P:positive regulation of macroautophagy
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0051865--P:protein autoubiquitination
GO:0010332--P:response to gamma radiation
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

nle:100596766

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	92.87	0.00e+00	738.00
IUUC-Apl-004168	Anas platyrhynchos	75.98	0.00e+00	632.00
IUUC-Aca-004395	Anolis carolinensis	70.10	2.00e-165	574.00
IUUC-Ame-011325	Astyanax mexicanus	46.44	4.00e-68	251.00
IUUC-Bta-012613	Bos taurus	93.12	0.00e+00	739.00
IUUC-Cja-018856	Callithrix jacchus	96.56	0.00e+00	788.00
IUUC-Cfa-021019	Canis familiaris	92.38	0.00e+00	731.00
IUUC-Cpo-021845	Cavia porcellus	91.40	0.00e+00	724.00
IUUC-Csa-023380	Chlorocebus sabaeus	97.54	0.00e+00	758.00
IUUC-Cho-024733	Choloepus hoffmanni	83.71	7.00e-89	320.00
IUUC-Dre-028675	Danio rerio	59.87	1.00e-108	386.00
IUUC-Dno-030018	Dasypus novemcinctus	90.69	0.00e+00	719.00
IUUC-Dor-030599	Dipodomys ordii	89.14	2.00e-124	437.00
IUUC-Dse-031522	Dothistroma septosporum	35.53	2.00e-06	46.60
IUUC-Ete-033134	Echinops telfairi	88.73	0.00e+00	726.00
IUUC-Eca-033931	Equus caballus	93.61	0.00e+00	730.00
IUUC-Eeu-034903	Erinaceus europaeus	90.42	0.00e+00	717.00
IUUC-Fca-035642	Felis catus	93.12	0.00e+00	733.00
IUUC-Fal-037108	Ficedula albicollis	76.47	0.00e+00	632.00
IUUC-Gga-040903	Gallus gallus	74.25	7.00e-176	609.00
IUUC-Ggo-044635	Gorilla gorilla	98.77	0.00e+00	763.00
IUUC-Hsa-046345	Homo sapiens	98.53	0.00e+00	763.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	90.73	0.00e+00	700.00
IUUC-Lch-050599	Latimeria chalumnae	60.95	3.00e-136	478.00
IUUC-Loc-052378	Lepisosteus oculatus	64.71	3.00e-119	421.00
IUUC-Laf-053332	Loxodonta africana	91.18	0.00e+00	723.00
IUUC-Mcc-054705	Macaca mulatta	96.81	0.00e+00	756.00
IUUC-Meu-056825	Macropus eugenii	83.82	0.00e+00	689.00
IUUC-Mga-059528	Meleagris gallopavo	75.00	5.00e-180	623.00
IUUC-Mmr-060688	Microcebus murinus	94.10	0.00e+00	734.00
IUUC-Mdo-061882	Monodelphis domestica	82.84	0.00e+00	692.00
IUUC-Mmu-064352	Mus musculus	88.94	0.00e+00	736.00
IUUC-Mpu-066712	Mustela putorius furo	92.35	0.00e+00	677.00
IUUC-Mlu-068093	Myotis lucifugus	90.42	0.00e+00	716.00
IUUC-Ont-071759	Oreochromis niloticus	58.96	7.00e-110	390.00
IUUC-Oan-073673	Ornithorhynchus anatinus	81.37	0.00e+00	678.00
IUUC-Ocu-074192	Oryctolagus cuniculus	91.40	0.00e+00	731.00
IUUC-Ola-087424	Oryzias latipes	58.63	3.00e-108	385.00
IUUC-Oga-088808	Otolemur garnettii	93.37	0.00e+00	740.00
IUUC-Oar-089553	Ovis aries	92.63	0.00e+00	734.00
IUUC-Ptr-090518	Pan troglodytes	98.28	0.00e+00	759.00
IUUC-Pan-092781	Papio anubis	96.56	0.00e+00	754.00
IUUC-Psi-093914	Pelodiscus sinensis	75.55	2.00e-179	621.00
IUUC-Ppa-095862	Physcomitrella patens	37.33	5.00e-06	44.30
IUUC-Pfo-096346	Poecilia formosa	57.86	2.00e-108	385.00
IUUC-Pca-100914	Procavia capensis	88.97	0.00e+00	731.00
IUUC-Pva-102728	Pteropus vampyrus	92.63	0.00e+00	727.00
IUUC-Rno-105922	Rattus norvegicus	87.47	0.00e+00	682.00
IUUC-Sha-107124	Sarcophilus harrisii	83.82	0.00e+00	702.00
IUUC-Sar-113607	Sorex araneus	87.96	0.00e+00	697.00
IUUC-Ssc-116355	Sus scrofa	93.37	0.00e+00	739.00
IUUC-Tgu-116476	Taeniopygia guttata	76.47	0.00e+00	630.00
IUUC-Tru-118737	Takifugu rubripes	59.93	5.00e-112	397.00
IUUC-Tsy-118908	Tarsius syrichta	93.37	0.00e+00	739.00
IUUC-Tbe-127258	Tupaia belangeri	94.84	0.00e+00	745.00
IUUC-Vpa-130138	Vicugna pacos	91.89	0.00e+00	734.00
IUUC-Xtr-132100	Xenopus tropicalis	59.56	2.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence