iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
CPLM	dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	7.10e-08	32.9	176	192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 4    CPvCqkm.vdqtdfeeH 19
           C++C+k+  d++++++H
   Q: 176  CEMCGKAfRDVYHLNRH 192
           ***************** PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEANWTAFLF QAHEASHHQQ QAAQNSLLPL LSSAVEPPDQ KPLLPIPITQ KPQAAPETLK 60
DAIGIKKEKP KTSFVCTYCS KAFRDSYHLR RHQSCHTGIK LVSRAKKTPT TVVPLISTIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCTGCTTT GTTGTCGCCT CCTCCGGCTG AGGAGGCCCC CGAGCGGGGG GAGTGGGGAG 60
GAGGGGGTCG GCCGCCGCAG CCATGGAGGC CAACTGGACC GCGTTCCTGT TCCAGGTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020683--Ankyrin_rpt-contain_dom
IPR023413--GFP-like
IPR013087--Znf_C2H2_type
IPR001781--Znf_LIM

PROSITE

PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

SMART

SM00355--ZnF_C2H2

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0046872--F:metal ion binding
GO:0003676--F:nucleic acid binding
GO:0001525--P:angiogenesis
GO:0001885--P:endothelial cell development

KEGG

rno:287615

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002029	Ailuropoda melanoleuca	95.74	0.00e+00	757.00
IUUC-Apl-003373	Anas platyrhynchos	89.06	0.00e+00	723.00
IUUC-Aca-005340	Anolis carolinensis	93.07	3.00e-151	527.00
IUUC-Ame-011155	Astyanax mexicanus	56.33	6.00e-150	523.00
IUUC-Bta-012345	Bos taurus	98.39	0.00e+00	767.00
IUUC-Cja-019080	Callithrix jacchus	93.96	0.00e+00	750.00
IUUC-Cfa-021007	Canis familiaris	95.81	0.00e+00	781.00
IUUC-Cpo-021494	Cavia porcellus	94.42	0.00e+00	769.00
IUUC-Csa-023995	Chlorocebus sabaeus	99.23	0.00e+00	789.00
IUUC-Cho-024441	Choloepus hoffmanni	97.58	0.00e+00	763.00
IUUC-Dre-027737	Danio rerio	54.41	3.00e-139	488.00
IUUC-Dno-029621	Dasypus novemcinctus	97.88	0.00e+00	781.00
IUUC-Eca-033916	Equus caballus	98.23	0.00e+00	790.00
IUUC-Eeu-035069	Erinaceus europaeus	95.74	0.00e+00	629.00
IUUC-Fca-036019	Felis catus	95.19	0.00e+00	771.00
IUUC-Fal-036792	Ficedula albicollis	88.68	0.00e+00	741.00
IUUC-Gmo-038865	Gadus morhua	69.59	2.00e-116	412.00
IUUC-Gga-040650	Gallus gallus	89.55	0.00e+00	748.00
IUUC-Gac-041450	Gasterosteus aculeatus	58.60	8.00e-152	530.00
IUUC-Ggo-044834	Gorilla gorilla	98.46	0.00e+00	756.00
IUUC-Hsa-046539	Homo sapiens	98.46	0.00e+00	755.00
IUUC-Itr-048584	Ictidomys tridecemlineatus	98.99	0.00e+00	770.00
IUUC-Lch-050011	Latimeria chalumnae	68.09	4.00e-171	594.00
IUUC-Loc-052051	Lepisosteus oculatus	55.35	3.00e-146	511.00
IUUC-Laf-053768	Loxodonta africana	94.56	0.00e+00	783.00
IUUC-Mcc-055529	Macaca mulatta	98.59	0.00e+00	766.00
IUUC-Meu-055911	Macropus eugenii	90.72	1.00e-172	598.00
IUUC-Mla-058984	Melampsora laricipopulina	48.65	1.80e+00	28.10
IUUC-Mga-060192	Meleagris gallopavo	89.43	0.00e+00	751.00
IUUC-Mmr-060984	Microcebus murinus	97.12	0.00e+00	770.00
IUUC-Mdo-062265	Monodelphis domestica	93.08	0.00e+00	796.00
IUUC-Mmu-063475	Mus musculus	99.04	0.00e+00	799.00
IUUC-Mpu-066117	Mustela putorius furo	96.15	0.00e+00	749.00
IUUC-Mlu-067275	Myotis lucifugus	95.77	0.00e+00	795.00
IUUC-Nle-069246	Nomascus leucogenys	98.19	0.00e+00	754.00
IUUC-Opr-070726	Ochotona princeps	97.58	0.00e+00	760.00
IUUC-Ont-072277	Oreochromis niloticus	59.19	1.00e-149	522.00
IUUC-Oan-072979	Ornithorhynchus anatinus	92.05	0.00e+00	767.00
IUUC-Ocu-073937	Oryctolagus cuniculus	98.19	0.00e+00	761.00
IUUC-Ola-087493	Oryzias latipes	67.48	4.00e-115	408.00
IUUC-Oga-088803	Otolemur garnettii	98.65	0.00e+00	786.00
IUUC-Oar-089981	Ovis aries	98.39	0.00e+00	766.00
IUUC-Ptr-091099	Pan troglodytes	98.39	0.00e+00	737.00
IUUC-Pan-092907	Papio anubis	98.65	0.00e+00	785.00
IUUC-Psi-093337	Pelodiscus sinensis	90.25	0.00e+00	732.00
IUUC-Pfo-096575	Poecilia formosa	52.75	4.00e-141	494.00
IUUC-Pva-102541	Pteropus vampyrus	97.31	0.00e+00	816.00
IUUC-Sha-106911	Sarcophilus harrisii	95.36	0.00e+00	760.00
IUUC-Ssl-108572	Sclerotinia sclerotiorum	37.25	1.60e-01	30.00
IUUC-Sar-113280	Sorex araneus	91.94	0.00e+00	696.00
IUUC-Ssc-116365	Sus scrofa	98.65	0.00e+00	785.00
IUUC-Tgu-116650	Taeniopygia guttata	93.17	0.00e+00	720.00
IUUC-Tru-117810	Takifugu rubripes	56.46	1.00e-147	516.00
IUUC-Tsy-119364	Tarsius syrichta	94.57	0.00e+00	712.00
IUUC-Tni-120633	Tetraodon nigroviridis	56.38	2.00e-147	515.00
IUUC-Tbe-127293	Tupaia belangeri	99.19	0.00e+00	766.00
IUUC-Ttr-128189	Tursiops truncatus	93.15	0.00e+00	722.00
IUUC-Xtr-131813	Xenopus tropicalis	75.99	0.00e+00	672.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence