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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105971
Ensembl Protein ID ENSRNOP00000067636.2
UniProt Accession M0RDD8; M0RDD8_RAT
Genbank Protein ID ENSRNOP00000067636
Protein Name Echinoderm microtubule-associated protein-like 1
Genbank Nucleotide ID AABR07065501
Gene Name Eml1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000043143.4 ENSRNOT00000071733.2 ENSRNOP00000067418.2
ENSRNOG00000043143.4 ENSRNOT00000071863.3 ENSRNOP00000067636.2
Annotation
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-13 50.5 753 785
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH++ vt ++f   d +l+++G+ D +i+ W++
   Q: 753  GHSSHVTNVDFlcEDsHLISTGGKDTSIMQWRV 785
           8***********945599*************95 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MEISDRIASL EQRVQMQEDD IQLLKSALAD VVRRLNITEE QQAVLNRKGP TKARPLGQTL 60
PLRTTVNNGT VLPKKPSASL PSPSGSRKEM VVPVTKSINR TSSSERVSPG GRRESSGDSK 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105971|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGTCTAGATG ACAGCGCGTC TGCTGCCAGC AGCATGGAGA TATCAGACCG CATCGCCTCT 60
CTGGAGCAGC GGGTCCAGAT GCAGGAGGAT GACATTCAGC TGCTCAAGTC GGCGCTGGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105971|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF03451--HELP
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:1990023--C:mitotic spindle midzone
GO:0097431--C:mitotic spindle pole
GO:0007420--P:brain development
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0007052--P:mitotic spindle organization
GO:0007405--P:neuroblast proliferation
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002077 Ailuropoda melanoleuca 82.00 0.00e+00 1256.00
IUUC-Apl-004179 Anas platyrhynchos 82.19 0.00e+00 1236.00
IUUC-Aca-004993 Anolis carolinensis 75.55 0.00e+00 1152.00
IUUC-Ame-011332 Astyanax mexicanus 69.58 0.00e+00 1103.00
IUUC-Bta-013419 Bos taurus 72.80 0.00e+00 1089.00
IUUC-Cja-018976 Callithrix jacchus 83.82 0.00e+00 1281.00
IUUC-Cfa-021276 Canis familiaris 85.11 0.00e+00 1267.00
IUUC-Csa-023355 Chlorocebus sabaeus 84.18 0.00e+00 1284.00
IUUC-Dre-028728 Danio rerio 70.32 0.00e+00 1105.00
IUUC-Dno-029055 Dasypus novemcinctus 81.86 0.00e+00 1269.00
IUUC-Dor-030628 Dipodomys ordii 83.70 0.00e+00 1249.00
IUUC-Ete-032845 Echinops telfairi 86.40 0.00e+00 703.00
IUUC-Eca-034266 Equus caballus 85.18 0.00e+00 1322.00
IUUC-Fca-035446 Felis catus 84.33 0.00e+00 1267.00
IUUC-Fal-036734 Ficedula albicollis 79.93 0.00e+00 1226.00
IUUC-Gmo-038689 Gadus morhua 64.73 0.00e+00 1044.00
IUUC-Gga-040934 Gallus gallus 85.02 0.00e+00 1019.00
IUUC-Gac-042476 Gasterosteus aculeatus 63.85 0.00e+00 1043.00
IUUC-Ggo-044828 Gorilla gorilla 83.94 0.00e+00 1319.00
IUUC-Hsa-045664 Homo sapiens 83.94 0.00e+00 1315.00
IUUC-Lch-050508 Latimeria chalumnae 75.61 0.00e+00 1191.00
IUUC-Loc-052823 Lepisosteus oculatus 73.67 0.00e+00 1164.00
IUUC-Laf-054164 Loxodonta africana 80.86 0.00e+00 1180.00
IUUC-Mcc-055810 Macaca mulatta 85.68 0.00e+00 1318.00
IUUC-Mga-059405 Meleagris gallopavo 79.81 0.00e+00 1218.00
IUUC-Mmr-061144 Microcebus murinus 86.41 0.00e+00 1300.00
IUUC-Mdo-062834 Monodelphis domestica 81.94 0.00e+00 1266.00
IUUC-Mmu-063955 Mus musculus 88.26 0.00e+00 1320.00
IUUC-Mpu-066240 Mustela putorius furo 83.96 0.00e+00 1253.00
IUUC-Mlu-067847 Myotis lucifugus 84.78 0.00e+00 970.00
IUUC-Nle-069783 Nomascus leucogenys 83.64 0.00e+00 1299.00
IUUC-Opr-070409 Ochotona princeps 79.88 0.00e+00 1212.00
IUUC-Ont-072468 Oreochromis niloticus 69.36 0.00e+00 1094.00
IUUC-Oan-073315 Ornithorhynchus anatinus 81.05 0.00e+00 1235.00
IUUC-Ocu-074604 Oryctolagus cuniculus 89.04 0.00e+00 1151.00
IUUC-Ola-086734 Oryzias latipes 66.34 0.00e+00 1048.00
IUUC-Oga-089105 Otolemur garnettii 83.09 0.00e+00 1264.00
IUUC-Oar-090057 Ovis aries 84.41 0.00e+00 1301.00
IUUC-Ptr-091138 Pan troglodytes 83.94 0.00e+00 1316.00
IUUC-Pan-092691 Papio anubis 77.49 0.00e+00 1159.00
IUUC-Psi-093076 Pelodiscus sinensis 79.85 0.00e+00 1226.00
IUUC-Pfo-096794 Poecilia formosa 65.50 0.00e+00 1039.00
IUUC-Pab-097787 Pongo abelii 85.32 0.00e+00 1347.00
IUUC-Pva-102676 Pteropus vampyrus 82.24 0.00e+00 1243.00
IUUC-Sha-107530 Sarcophilus harrisii 82.71 0.00e+00 1249.00
IUUC-Ssc-116169 Sus scrofa 68.31 0.00e+00 806.00
IUUC-Tgu-117046 Taeniopygia guttata 82.21 0.00e+00 1234.00
IUUC-Tru-118596 Takifugu rubripes 65.65 0.00e+00 1041.00
IUUC-Tsy-119142 Tarsius syrichta 80.37 0.00e+00 969.00
IUUC-Tni-120377 Tetraodon nigroviridis 66.67 0.00e+00 1048.00
IUUC-Tbe-127916 Tupaia belangeri 70.53 0.00e+00 840.00
IUUC-Ttr-129042 Tursiops truncatus 82.24 0.00e+00 1296.00
IUUC-Xtr-132117 Xenopus tropicalis 73.93 0.00e+00 1140.00
Created Date 25-Jun-2017

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