iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000013995.2	ENSCJAT00000027227.2	ENSCJAP00000025767.2
ENSCJAG00000013995.2	ENSCJAT00000027216.2	ENSCJAP00000025756.2
ENSCJAG00000013995.2	ENSCJAT00000027231.1	ENSCJAP00000025771.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-24	85.8	406	445
UBD/Beta-Prp	9.30e-46	157.3	315	480

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+++v + +f  ++ ++vsGs+D t+k+WDlr+ v++k+
   Q: 406  GHSGKVLSAKFllDNARIVSGSHDRTLKLWDLRSKVCIKT 445
           8***********64489********************985 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
            +++++h++ +++v+fsp+++llatg++d+++k+w+v+ +k+    slsg +a++t+++f++ g++l+ +s+D + ++w ++++   ht
   Q: 315  LCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCefKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT 403
           57899************************************9999******************************************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           l+gh+ +vls +f  ++ ++vsGshdrt+++wdl+++ c++++++g +    c  + +++++++sG+ D+++r+Wd++ ++
   Q: 404  LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS----CNDIVCTEQCVMSGHFDKKIRFWDIRYDT 480
           *****************************************9999988....888888889****************5443 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MSSGLRAPDF PRWKRHISEE LRRRDRLQRQ AFEEIILQYN KLLEKSDLHS VLAQKLQAEK 60
HDVPNRHEIS PGHDGTWNDS QLQEMAQLRI KHQEELTELH KKRGELAQLV IDLNNQMQQK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGACCGTCC CGGATGGCCT CGGGACACCC AGTGTGTGGA GGTGAGCTCC GGGATTGCAG 60
GTTTTCCCGC GTCCGCTGGT CGCCTCATGC TGCAGGCCGT GGCCGCTAGC CCCCGCTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0005930--C:axoneme
GO:0039689--P:negative stranded viral RNA replication

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002242	Ailuropoda melanoleuca	77.02	0.00e+00	880.00
IUUC-Apl-003384	Anas platyrhynchos	77.38	0.00e+00	899.00
IUUC-Aca-004962	Anolis carolinensis	75.36	0.00e+00	867.00
IUUC-Ame-010915	Astyanax mexicanus	63.58	2.00e-111	395.00
IUUC-Bta-012388	Bos taurus	82.67	0.00e+00	978.00
IUUC-Cfa-020484	Canis familiaris	85.81	0.00e+00	994.00
IUUC-Cpo-022156	Cavia porcellus	84.94	0.00e+00	974.00
IUUC-Csa-024019	Chlorocebus sabaeus	85.32	0.00e+00	968.00
IUUC-Cho-024311	Choloepus hoffmanni	70.32	0.00e+00	794.00
IUUC-Cin-025260	Ciona intestinalis	35.02	4.00e-82	299.00
IUUC-Dre-027702	Danio rerio	65.70	0.00e+00	738.00
IUUC-Dno-029728	Dasypus novemcinctus	81.43	0.00e+00	978.00
IUUC-Dor-030587	Dipodomys ordii	82.75	7.00e-115	407.00
IUUC-Dme-031595	Drosophila melanogaster	35.29	1.00e-82	300.00
IUUC-Ete-032969	Echinops telfairi	65.16	4.00e-180	624.00
IUUC-Eca-034214	Equus caballus	86.69	0.00e+00	824.00
IUUC-Eeu-034537	Erinaceus europaeus	77.69	0.00e+00	766.00
IUUC-Fca-036005	Felis catus	82.24	0.00e+00	912.00
IUUC-Fal-037593	Ficedula albicollis	74.78	0.00e+00	835.00
IUUC-Gmo-039042	Gadus morhua	68.45	4.00e-138	484.00
IUUC-Gga-040986	Gallus gallus	74.92	0.00e+00	898.00
IUUC-Gac-041351	Gasterosteus aculeatus	63.92	0.00e+00	749.00
IUUC-Ggo-045427	Gorilla gorilla	85.71	0.00e+00	993.00
IUUC-Hsa-046632	Homo sapiens	87.93	0.00e+00	1016.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	83.22	0.00e+00	946.00
IUUC-Lch-049439	Latimeria chalumnae	42.99	7.00e-105	374.00
IUUC-Lpe-051254	Leersia perrieri	24.74	9.00e-30	124.00
IUUC-Loc-052610	Lepisosteus oculatus	65.50	0.00e+00	743.00
IUUC-Laf-053936	Loxodonta africana	80.73	0.00e+00	955.00
IUUC-Mcc-055504	Macaca mulatta	82.90	0.00e+00	1006.00
IUUC-Meu-056516	Macropus eugenii	73.17	0.00e+00	825.00
IUUC-Mga-059777	Meleagris gallopavo	74.63	0.00e+00	885.00
IUUC-Mmr-061298	Microcebus murinus	85.69	0.00e+00	991.00
IUUC-Mdo-062969	Monodelphis domestica	77.78	0.00e+00	907.00
IUUC-Mmu-064076	Mus musculus	82.64	0.00e+00	949.00
IUUC-Mpu-066196	Mustela putorius furo	83.62	0.00e+00	969.00
IUUC-Mlu-067651	Myotis lucifugus	84.20	0.00e+00	971.00
IUUC-Nle-069853	Nomascus leucogenys	87.77	0.00e+00	1016.00
IUUC-Opr-070350	Ochotona princeps	95.32	3.00e-122	432.00
IUUC-Ont-072489	Oreochromis niloticus	63.65	0.00e+00	731.00
IUUC-Oan-072703	Ornithorhynchus anatinus	72.31	0.00e+00	813.00
IUUC-Ocu-074205	Oryctolagus cuniculus	82.99	0.00e+00	984.00
IUUC-Oba-075619	Oryza barthii	26.44	9.00e-29	121.00
IUUC-Ogl-077671	Oryza glaberrima	26.44	1.00e-28	121.00
IUUC-Ogu-078052	Oryza glumaepatula	26.64	1.00e-28	121.00
IUUC-Oin-079611	Oryza indica	26.44	8.00e-29	121.00
IUUC-Ome-081560	Oryza meridionalis	26.64	9.00e-29	121.00
IUUC-Oni-082145	Oryza nivara	26.44	9.00e-29	121.00
IUUC-Oru-084858	Oryza rufipogon	26.44	1.00e-28	121.00
IUUC-Osa-086277	Oryza sativa	26.44	5.00e-29	122.00
IUUC-Ola-086816	Oryzias latipes	69.34	2.00e-99	355.00
IUUC-Oga-088765	Otolemur garnettii	83.55	0.00e+00	903.00
IUUC-Oar-090196	Ovis aries	80.21	0.00e+00	860.00
IUUC-Ptr-091676	Pan troglodytes	88.09	0.00e+00	1017.00
IUUC-Pan-092068	Papio anubis	86.19	0.00e+00	996.00
IUUC-Psi-093367	Pelodiscus sinensis	77.67	0.00e+00	888.00
IUUC-Pfo-096067	Poecilia formosa	65.06	0.00e+00	721.00
IUUC-Pab-098111	Pongo abelii	85.87	0.00e+00	993.00
IUUC-Pca-100680	Procavia capensis	74.50	0.00e+00	810.00
IUUC-Pva-102871	Pteropus vampyrus	80.41	0.00e+00	886.00
IUUC-Rno-106088	Rattus norvegicus	82.48	0.00e+00	950.00
IUUC-Sha-106984	Sarcophilus harrisii	79.93	0.00e+00	912.00
IUUC-Sar-113659	Sorex araneus	64.53	4.00e-94	337.00
IUUC-Ssc-116241	Sus scrofa	86.72	0.00e+00	984.00
IUUC-Tgu-116576	Taeniopygia guttata	78.30	0.00e+00	927.00
IUUC-Tru-118336	Takifugu rubripes	56.75	1.00e-168	586.00
IUUC-Tsy-119006	Tarsius syrichta	80.76	0.00e+00	927.00
IUUC-Tni-120300	Tetraodon nigroviridis	66.17	0.00e+00	725.00
IUUC-Tbe-127631	Tupaia belangeri	83.85	0.00e+00	763.00
IUUC-Ttr-129005	Tursiops truncatus	96.38	2.00e-114	406.00
IUUC-Vpa-130246	Vicugna pacos	81.43	0.00e+00	765.00
IUUC-Xtr-132798	Xenopus tropicalis	71.01	0.00e+00	803.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence