iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121002

Ensembl Protein ID

EOY22311

UniProt Accession

A0A061FYI2; A0A061FYI2_THECC

Genbank Protein ID

EOY22311.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001881

Gene Name

TCM_014525

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_014525	EOY22311	EOY22311

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-29	102.2	348	385
UBD/Beta-Prp	1.40e-50	173.1	264	549

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHtd+v++++    s++++vs+++D tikvWDl +g +
   Q: 348  GHTDKVCAVDVskvSSRHVVSAAYDRTIKVWDLQKGYC 385
           8**********9*866****************998866 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgd 107
           +h++ + ++ f  ++  l++g++d++ik wd++tg+l +sl g+ + v ++ + +d  +++ +s+ +++ vwd+++g   htl+gh+d+v+++++s+ s+ 
   Q: 264  AHEGGCASIMFEYNSGKLISGGQDRSIKMWDTSTGSLSHSLFGCLGSVLDLAITHDNRFIIAASSSNNLFVWDVNSGRVRHTLTGHTDKVCAVDVSKvSSR 364
           566677789998888889*******************************************************************************888* PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
           ++vs+  drti+vwdl++g+c      + ++  n ++++ dg+++ sG+ D+ +rlWd++tgkll +    h  +++s+s+++ng+ +++ ++d+  +l+d
   Q: 365  HVVSAAYDRTIKVWDLQKGYCTT--TIIFHSNCNALCFSTDGQIICSGHVDGNLRLWDIQTGKLLSEVAA-HSLAITSISLSRNGNVILTSGRDNLHNLFD 462
           **********************7..44444568999999999**************************98.****************************** PP
   S: 209  lqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
           +++ e+  t+++      +n ++  +sp+d++++ gs+Dgsi+iW + + d+++tl+ h   v +++  s  ++ l++++++++v +w
   Q: 463  IRSLEVCGTFRANGnrvaSNWSRSCMSPDDNHIAAGSADGSIYIWSISKADIVSTLKEHTAPVLCCTW-SGLGKPLASADKNGIVCTW 549
           **********99884454555666777********************************999999988.5557888999999998888 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVEVTLSLIP SFLSQSVAQP IPIPLFPFQH TNFSSIQANI IMSQEEVARE AIKHALKALK 60
KRHLVEEGAH APAYIALSRP IISQGSEWKE KAENLELELQ QCYKAQSRLS EQLVVEVAES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACCATTACT TCTTTCGACA ACAAAGAAAT TAAAACTATT AGACAAGTCA TCGTGAGTTT 60
CAATATGGGA ATAATTCAAG ACTAAACTTG GTTCTACGTT ACTGAAGCTG ATGTAGCCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	53.86	5.00e-147	513.00
IUUC-Aml-002242	Ailuropoda melanoleuca	26.86	1.00e-43	170.00
IUUC-Atr-003073	Amborella trichopoda	62.04	1.00e-156	545.00
IUUC-Apl-003384	Anas platyrhynchos	28.13	3.00e-52	198.00
IUUC-Aca-004962	Anolis carolinensis	34.25	7.00e-46	177.00
IUUC-Aly-005435	Arabidopsis lyrata	72.50	0.00e+00	769.00
IUUC-Ath-006948	Arabidopsis thaliana	71.51	0.00e+00	780.00
IUUC-Ame-010915	Astyanax mexicanus	32.90	2.00e-41	162.00
IUUC-Bta-012388	Bos taurus	32.91	2.00e-45	176.00
IUUC-Bdi-014231	Brachypodium distachyon	54.01	3.00e-154	537.00
IUUC-Bol-016174	Brassica oleracea	73.48	0.00e+00	773.00
IUUC-Bra-017165	Brassica rapa	72.19	0.00e+00	775.00
IUUC-Cja-020002	Callithrix jacchus	31.51	5.00e-35	141.00
IUUC-Cfa-020484	Canis familiaris	28.27	2.00e-49	189.00
IUUC-Cpo-022156	Cavia porcellus	27.70	3.00e-45	175.00
IUUC-Csa-024019	Chlorocebus sabaeus	29.37	8.00e-52	197.00
IUUC-Cho-024311	Choloepus hoffmanni	35.58	1.00e-34	140.00
IUUC-Cin-025260	Ciona intestinalis	31.39	9.00e-36	144.00
IUUC-Dre-027702	Danio rerio	32.57	1.00e-46	180.00
IUUC-Dno-029728	Dasypus novemcinctus	32.19	5.00e-45	175.00
IUUC-Dor-030897	Dipodomys ordii	31.96	3.00e-40	159.00
IUUC-Dme-031595	Drosophila melanogaster	34.15	3.00e-39	155.00
IUUC-Ete-032969	Echinops telfairi	31.96	5.00e-45	174.00
IUUC-Eca-034214	Equus caballus	35.58	5.00e-43	167.00
IUUC-Eeu-034537	Erinaceus europaeus	25.97	2.00e-39	155.00
IUUC-Fca-036005	Felis catus	32.19	1.00e-44	173.00
IUUC-Fal-037593	Ficedula albicollis	35.47	5.00e-49	187.00
IUUC-Gmo-039042	Gadus morhua	25.46	2.00e-40	159.00
IUUC-Gga-040986	Gallus gallus	35.14	2.00e-49	189.00
IUUC-Gac-041351	Gasterosteus aculeatus	26.09	4.00e-51	195.00
IUUC-Gma-043452	Glycine max	81.89	0.00e+00	889.00
IUUC-Ggo-045427	Gorilla gorilla	33.90	3.00e-45	175.00
IUUC-Hsa-046632	Homo sapiens	28.32	2.00e-48	186.00
IUUC-Hvu-047655	Hordeum vulgare	53.58	3.00e-120	424.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	29.37	7.00e-51	194.00
IUUC-Lpe-051254	Leersia perrieri	56.89	2.00e-158	551.00
IUUC-Loc-052610	Lepisosteus oculatus	32.34	1.00e-47	184.00
IUUC-Laf-053936	Loxodonta africana	32.77	1.00e-44	173.00
IUUC-Mcc-055504	Macaca mulatta	34.24	2.00e-45	176.00
IUUC-Meu-056516	Macropus eugenii	33.22	3.00e-46	179.00
IUUC-Mtr-058062	Medicago truncatula	79.68	0.00e+00	826.00
IUUC-Mla-059081	Melampsora laricipopulina	29.46	6.00e-28	118.00
IUUC-Mga-059777	Meleagris gallopavo	28.02	9.00e-53	200.00
IUUC-Mmr-061298	Microcebus murinus	33.90	1.00e-45	177.00
IUUC-Mdo-062969	Monodelphis domestica	32.57	5.00e-46	178.00
IUUC-Mmu-064076	Mus musculus	32.67	2.00e-45	176.00
IUUC-Mac-065161	Musa acuminata	66.02	0.00e+00	629.00
IUUC-Mpu-066196	Mustela putorius furo	33.78	3.00e-45	175.00
IUUC-Mlu-067651	Myotis lucifugus	34.12	1.00e-45	177.00
IUUC-Nle-069853	Nomascus leucogenys	27.75	6.00e-46	177.00
IUUC-Opr-071039	Ochotona princeps	31.62	3.00e-40	159.00
IUUC-Ont-072489	Oreochromis niloticus	31.41	7.00e-47	181.00
IUUC-Oan-072703	Ornithorhynchus anatinus	31.68	1.00e-45	176.00
IUUC-Ocu-074205	Oryctolagus cuniculus	33.03	3.00e-45	175.00
IUUC-Oba-075619	Oryza barthii	57.28	3.00e-162	564.00
IUUC-Obr-076632	Oryza brachyantha	57.32	2.00e-155	541.00
IUUC-Ogl-077671	Oryza glaberrima	57.50	4.00e-162	563.00
IUUC-Ogu-078052	Oryza glumaepatula	57.28	4.00e-162	563.00
IUUC-Oin-079611	Oryza indica	57.50	2.00e-160	557.00
IUUC-Olo-080408	Oryza longistaminata	57.70	2.00e-150	525.00
IUUC-Ome-081560	Oryza meridionalis	57.28	6.00e-162	563.00
IUUC-Oni-082145	Oryza nivara	57.28	3.00e-162	564.00
IUUC-Opu-083918	Oryza punctata	57.09	2.00e-150	525.00
IUUC-Oru-084858	Oryza rufipogon	57.28	1.00e-160	558.00
IUUC-Osa-086277	Oryza sativa	57.28	2.00e-160	557.00
IUUC-Ola-086964	Oryzias latipes	34.71	2.00e-43	168.00
IUUC-Olu-087622	Ostreococcus lucimarinus	35.50	7.00e-69	253.00
IUUC-Oga-088765	Otolemur garnettii	29.37	7.00e-53	201.00
IUUC-Oar-090196	Ovis aries	33.45	3.00e-43	169.00
IUUC-Ptr-091676	Pan troglodytes	28.32	1.00e-48	186.00
IUUC-Pan-092068	Papio anubis	34.24	2.00e-45	176.00
IUUC-Psi-093367	Pelodiscus sinensis	33.99	1.00e-50	193.00
IUUC-Ppa-095699	Physcomitrella patens	50.69	3.00e-148	517.00
IUUC-Pfo-096067	Poecilia formosa	25.73	2.00e-49	189.00
IUUC-Pab-098111	Pongo abelii	33.90	5.00e-45	174.00
IUUC-Pop-099116	Populus trichocarpa	83.27	0.00e+00	902.00
IUUC-Pca-100680	Procavia capensis	34.08	1.00e-35	143.00
IUUC-Ppe-101790	Prunus persica	82.26	0.00e+00	890.00
IUUC-Pva-102871	Pteropus vampyrus	34.12	2.00e-46	179.00
IUUC-Pgr-103597	Puccinia graminis	28.22	5.00e-27	116.00
IUUC-Rno-106088	Rattus norvegicus	32.34	2.00e-45	176.00
IUUC-Sha-106984	Sarcophilus harrisii	27.55	2.00e-50	192.00
IUUC-Smo-108983	Selaginella moellendorffii	51.31	9.00e-144	502.00
IUUC-Sit-110828	Setaria italica	58.59	7.00e-162	563.00
IUUC-Sly-111009	Solanum lycopersicum	76.50	0.00e+00	772.00
IUUC-Stu-112370	Solanum tuberosum	76.42	0.00e+00	839.00
IUUC-Sar-113109	Sorex araneus	33.97	5.00e-27	114.00
IUUC-Sbi-114819	Sorghum bicolor	57.56	2.00e-159	554.00
IUUC-Ssc-116241	Sus scrofa	33.89	2.00e-42	166.00
IUUC-Tgu-116576	Taeniopygia guttata	28.76	2.00e-53	202.00
IUUC-Tru-118336	Takifugu rubripes	27.72	2.00e-33	136.00
IUUC-Tsy-119006	Tarsius syrichta	34.24	3.00e-45	175.00
IUUC-Tni-120300	Tetraodon nigroviridis	31.58	8.00e-46	177.00
IUUC-Tae-123652	Triticum aestivum	53.86	3.00e-147	514.00
IUUC-Tur-126463	Triticum urartu	53.86	5.00e-147	514.00
IUUC-Tbe-127631	Tupaia belangeri	32.30	7.00e-45	174.00
IUUC-Ttr-129005	Tursiops truncatus	35.04	3.00e-39	155.00
IUUC-Vvi-130878	Vitis vinifera	79.37	0.00e+00	845.00
IUUC-Xtr-132798	Xenopus tropicalis	29.03	6.00e-35	141.00
IUUC-Xma-133264	Xiphophorus maculatus	26.06	3.00e-49	189.00
IUUC-Zma-135185	Zea mays	58.18	3.00e-164	570.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence