iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-011883

Ensembl Protein ID

ENSAMXP00000009172.1

UniProt Accession

W5KNL0; W5KNL0_ASTMX

Genbank Protein ID

ENSAMXP00000009172

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01002055

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000008921.1	ENSAMXT00000009172.1	ENSAMXP00000009172.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.00e-16	60.2	350	395

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 350  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 395
           79*********....9******************.*******7.******86 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MPGSLSNEEE GQDDLDFEDD IADEDEEDER DNVPLSPLER FFSDNDSVKQ KKKKPSKLKE 60
GKMPKVKKKK KEIPSVGERE DMSERDDHGH RSGSESSSYG TLKKKKKKPK EKKEKKAKWK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGGAT CGCTGAGCAA TGAAGAAGAG GGGCAAGACG ATCTGGATTT TGAAGACGAC 60
ATAGCAGGTG AGGGGAGTGT AGCCTAAAGT GGCAAAAAAG GAGGAGGAGG AGGAAGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	76.70	0.00e+00	2510.00
IUUC-Apl-003406	Anas platyrhynchos	82.18	0.00e+00	1848.00
IUUC-Aca-004671	Anolis carolinensis	76.43	0.00e+00	2395.00
IUUC-Bta-012951	Bos taurus	79.36	0.00e+00	2382.00
IUUC-Cja-018871	Callithrix jacchus	82.16	0.00e+00	2099.00
IUUC-Cfa-021063	Canis familiaris	80.91	0.00e+00	2115.00
IUUC-Cpo-022083	Cavia porcellus	81.40	0.00e+00	2123.00
IUUC-Csa-023084	Chlorocebus sabaeus	77.76	0.00e+00	2576.00
IUUC-Dre-028226	Danio rerio	87.17	0.00e+00	2860.00
IUUC-Ete-032757	Echinops telfairi	68.31	0.00e+00	1985.00
IUUC-Eca-034372	Equus caballus	77.78	0.00e+00	2509.00
IUUC-Fca-036048	Felis catus	80.52	0.00e+00	2116.00
IUUC-Fal-037282	Ficedula albicollis	76.62	0.00e+00	2544.00
IUUC-Ggo-044514	Gorilla gorilla	77.81	0.00e+00	2568.00
IUUC-Hsa-046181	Homo sapiens	77.76	0.00e+00	2564.00
IUUC-Loc-052795	Lepisosteus oculatus	82.33	0.00e+00	2874.00
IUUC-Laf-053749	Loxodonta africana	81.39	0.00e+00	2167.00
IUUC-Mcc-055856	Macaca mulatta	77.84	0.00e+00	2568.00
IUUC-Mga-059630	Meleagris gallopavo	78.62	0.00e+00	2447.00
IUUC-Mmr-060986	Microcebus murinus	82.90	0.00e+00	2123.00
IUUC-Mmu-063644	Mus musculus	77.43	0.00e+00	2566.00
IUUC-Mpu-066528	Mustela putorius furo	81.80	0.00e+00	2154.00
IUUC-Nle-069824	Nomascus leucogenys	81.25	0.00e+00	2019.00
IUUC-Ont-072647	Oreochromis niloticus	84.04	0.00e+00	2846.00
IUUC-Oan-072885	Ornithorhynchus anatinus	67.42	0.00e+00	1627.00
IUUC-Ola-086961	Oryzias latipes	80.25	0.00e+00	2723.00
IUUC-Oga-088775	Otolemur garnettii	77.37	0.00e+00	2570.00
IUUC-Oar-090301	Ovis aries	76.21	0.00e+00	2467.00
IUUC-Ptr-090586	Pan troglodytes	76.54	0.00e+00	2533.00
IUUC-Pan-092282	Papio anubis	78.28	0.00e+00	2545.00
IUUC-Psi-093007	Pelodiscus sinensis	80.11	0.00e+00	2105.00
IUUC-Pfo-096802	Poecilia formosa	85.60	0.00e+00	2536.00
IUUC-Pab-097677	Pongo abelii	82.88	0.00e+00	2145.00
IUUC-Pca-100559	Procavia capensis	76.76	0.00e+00	1986.00
IUUC-Rno-105378	Rattus norvegicus	77.27	0.00e+00	2552.00
IUUC-Sha-107350	Sarcophilus harrisii	78.81	0.00e+00	2071.00
IUUC-Ssc-116303	Sus scrofa	78.22	0.00e+00	2168.00
IUUC-Tgu-116779	Taeniopygia guttata	76.80	0.00e+00	2212.00
IUUC-Tru-117597	Takifugu rubripes	82.58	0.00e+00	2727.00
IUUC-Tsy-119261	Tarsius syrichta	64.89	0.00e+00	1600.00
IUUC-Ttr-128301	Tursiops truncatus	77.60	0.00e+00	2549.00
IUUC-Xtr-132668	Xenopus tropicalis	71.22	0.00e+00	2424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence