iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050152

Ensembl Protein ID

ENSLACP00000004003.1

UniProt Accession

H3A2Y2; H3A2Y2_LATCH

Genbank Protein ID

ENSLACP00000004003

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01220788

Gene Name

SF3A1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000003565.1	ENSLACT00000004039.1	ENSLACP00000004003.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.40e-17	62.3	701	784

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlk..v.....npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           v+v+v++++++ e++l+  v     + +d+V+++K ki++++g+p+ +q+L+y+G+ ++d ++La+y+++ gs+ihl +k++gg
   Q: 701  VKVQVPNMQDKtEWKLNgqVlaftlPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSVIHLALKERGG 784
           68999999999999999994455548888**************************************************99875 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MPAGPVQMVQ PPQAENNKAP DEPKEESPTS KPVVGIIYPP PEVRNIVDKT ASFVARNGPE 60
FEARIRQNEI NNPKFNFLNP NDPYHAYYRH KVNEFKEGKA QEPSAAVPKV MQQQAPQQQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAACATGCGC GCTATTTTCT TTGAAAGAAA GCGAGAACAT TTTCAGGAAA ATATTTAAAA 60
AGGAAGTAAA ATGTAACTGG ATGTCAGTTT TCAATTATTG TTATTTTGTT CCTGCAGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0003723--F:RNA binding
GO:0006396--P:RNA processing

KEGG

lcm:102349695

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000319	Aegilops tauschii	36.04	1.00e-46	181.00
IUUC-Aml-002416	Ailuropoda melanoleuca	82.20	0.00e+00	994.00
IUUC-Atr-003001	Amborella trichopoda	37.69	1.00e-17	85.10
IUUC-Apl-003584	Anas platyrhynchos	87.03	0.00e+00	698.00
IUUC-Aca-004690	Anolis carolinensis	77.16	0.00e+00	979.00
IUUC-Aly-005487	Arabidopsis lyrata	43.79	1.00e-55	211.00
IUUC-Ath-007275	Arabidopsis thaliana	43.77	4.00e-58	219.00
IUUC-Acl-008320	Aspergillus clavatus	44.21	5.00e-49	188.00
IUUC-Afl-008707	Aspergillus flavus	46.49	3.00e-59	222.00
IUUC-Afu-008786	Aspergillus fumigatus	42.19	3.00e-49	189.00
IUUC-Ani-009307	Aspergillus nidulans	45.80	2.00e-54	206.00
IUUC-Ang-009761	Aspergillus niger	47.02	4.00e-57	215.00
IUUC-Aor-010067	Aspergillus oryzae	46.49	3.00e-59	222.00
IUUC-Ate-010515	Aspergillus terreus	46.15	2.00e-59	223.00
IUUC-Ame-011842	Astyanax mexicanus	80.00	0.00e+00	996.00
IUUC-Bgr-012204	Blumeria graminis	35.00	3.00e-65	242.00
IUUC-Bta-013525	Bos taurus	82.45	0.00e+00	995.00
IUUC-Bci-013842	Botrytis cinerea	47.12	1.00e-50	194.00
IUUC-Bdi-014436	Brachypodium distachyon	35.20	5.00e-73	269.00
IUUC-Bol-015186	Brassica oleracea	42.95	5.00e-52	199.00
IUUC-Bra-017856	Brassica rapa	43.23	1.00e-38	154.00
IUUC-Cel-018261	Caenorhabditis elegans	52.67	2.00e-80	293.00
IUUC-Cja-018989	Callithrix jacchus	82.16	0.00e+00	994.00
IUUC-Cfa-020629	Canis familiaris	82.20	0.00e+00	993.00
IUUC-Cpo-021759	Cavia porcellus	82.58	0.00e+00	984.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	38.26	1.00e-21	97.40
IUUC-Csa-023750	Chlorocebus sabaeus	82.03	0.00e+00	994.00
IUUC-Cho-024581	Choloepus hoffmanni	84.41	2.00e-111	396.00
IUUC-Cin-025640	Ciona intestinalis	57.95	6.00e-148	518.00
IUUC-Csv-025855	Ciona savignyi	67.83	2.00e-104	373.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	43.93	4.00e-46	179.00
IUUC-Cne-026952	Cryptococcus neoformans	41.75	3.00e-51	196.00
IUUC-Dre-028055	Danio rerio	79.18	0.00e+00	956.00
IUUC-Dno-029259	Dasypus novemcinctus	82.83	0.00e+00	1012.00
IUUC-Dor-031081	Dipodomys ordii	81.82	0.00e+00	984.00
IUUC-Dse-031438	Dothistroma septosporum	41.26	1.00e-49	191.00
IUUC-Dme-031975	Drosophila melanogaster	60.04	5.00e-150	525.00
IUUC-Ete-033177	Echinops telfairi	82.25	0.00e+00	798.00
IUUC-Eca-033670	Equus caballus	82.45	0.00e+00	996.00
IUUC-Eeu-035100	Erinaceus europaeus	83.88	0.00e+00	641.00
IUUC-Fca-036176	Felis catus	82.32	0.00e+00	993.00
IUUC-Fal-036776	Ficedula albicollis	86.36	0.00e+00	689.00
IUUC-Fox-037706	Fusarium oxysporum	41.11	6.00e-50	191.00
IUUC-Fso-038313	Fusarium solani	43.27	8.00e-45	174.00
IUUC-Gmo-038887	Gadus morhua	78.74	0.00e+00	1018.00
IUUC-Ggr-039932	Gaeumannomyces graminis	37.93	7.00e-35	141.00
IUUC-Gga-041184	Gallus gallus	87.15	0.00e+00	702.00
IUUC-Gac-042118	Gasterosteus aculeatus	78.97	0.00e+00	991.00
IUUC-Gma-042726	Glycine max	44.90	2.00e-65	243.00
IUUC-Ggo-045641	Gorilla gorilla	85.03	0.00e+00	1006.00
IUUC-Hsa-045751	Homo sapiens	82.03	0.00e+00	994.00
IUUC-Hvu-047702	Hordeum vulgare	32.25	6.00e-30	125.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	82.45	0.00e+00	996.00
IUUC-Kpa-049400	Komagataella pastoris	30.22	1.00e-30	127.00
IUUC-Lpe-051570	Leersia perrieri	45.18	2.00e-32	134.00
IUUC-Loc-051753	Lepisosteus oculatus	81.64	4.00e-165	575.00
IUUC-Lma-053219	Leptosphaeria maculans	37.65	1.00e-35	144.00
IUUC-Laf-053643	Loxodonta africana	80.18	0.00e+00	972.00
IUUC-Mcc-055091	Macaca mulatta	81.90	0.00e+00	994.00
IUUC-Meu-056036	Macropus eugenii	75.13	8.00e-176	610.00
IUUC-Mor-057214	Magnaporthe oryzae	37.64	3.00e-35	143.00
IUUC-Mpo-057385	Magnaporthe poae	30.67	2.00e-13	69.30
IUUC-Mtr-057954	Medicago truncatula	43.77	3.00e-62	233.00
IUUC-Mla-059020	Melampsora laricipopulina	35.93	3.00e-49	190.00
IUUC-Mga-060176	Meleagris gallopavo	87.20	0.00e+00	704.00
IUUC-Mvi-060278	Microbotryum violaceum	39.10	3.00e-53	203.00
IUUC-Mmr-061602	Microcebus murinus	86.31	0.00e+00	1035.00
IUUC-Mdo-062047	Monodelphis domestica	83.00	0.00e+00	796.00
IUUC-Mmu-063377	Mus musculus	81.19	0.00e+00	984.00
IUUC-Mac-065644	Musa acuminata	43.04	3.00e-61	229.00
IUUC-Mpu-066047	Mustela putorius furo	82.07	0.00e+00	994.00
IUUC-Mlu-067039	Myotis lucifugus	85.03	0.00e+00	987.00
IUUC-Nfi-068434	Neosartorya fischeri	46.50	1.00e-55	210.00
IUUC-Ncr-068912	Neurospora crassa	40.07	9.00e-40	157.00
IUUC-Nle-069540	Nomascus leucogenys	82.03	0.00e+00	994.00
IUUC-Opr-071157	Ochotona princeps	82.94	0.00e+00	983.00
IUUC-Ont-072229	Oreochromis niloticus	84.63	0.00e+00	778.00
IUUC-Oan-073616	Ornithorhynchus anatinus	92.04	4.00e-31	127.00
IUUC-Ocu-074002	Oryctolagus cuniculus	81.25	0.00e+00	983.00
IUUC-Oba-075659	Oryza barthii	33.62	2.00e-34	140.00
IUUC-Obr-076465	Oryza brachyantha	45.73	1.00e-33	138.00
IUUC-Ogl-077461	Oryza glaberrima	34.67	2.00e-64	240.00
IUUC-Ogu-078515	Oryza glumaepatula	33.84	7.00e-64	238.00
IUUC-Oin-080201	Oryza indica	37.67	3.00e-44	173.00
IUUC-Olo-080751	Oryza longistaminata	34.52	3.00e-34	139.00
IUUC-Ome-081201	Oryza meridionalis	36.90	3.00e-53	203.00
IUUC-Oni-082951	Oryza nivara	35.35	9.00e-62	231.00
IUUC-Opu-083560	Oryza punctata	36.50	2.00e-52	200.00
IUUC-Oru-084440	Oryza rufipogon	34.53	1.00e-64	241.00
IUUC-Osa-085699	Oryza sativa	34.67	2.00e-64	240.00
IUUC-Ola-086705	Oryzias latipes	78.09	0.00e+00	979.00
IUUC-Olu-087794	Ostreococcus lucimarinus	47.20	8.00e-51	194.00
IUUC-Oga-088896	Otolemur garnettii	81.69	0.00e+00	985.00
IUUC-Oar-090155	Ovis aries	83.57	0.00e+00	998.00
IUUC-Ptr-090754	Pan troglodytes	82.03	0.00e+00	996.00
IUUC-Pan-092464	Papio anubis	82.03	0.00e+00	994.00
IUUC-Psi-093166	Pelodiscus sinensis	89.44	0.00e+00	716.00
IUUC-Pma-094280	Petromyzon marinus	77.45	2.00e-128	452.00
IUUC-Pno-095106	Phaeosphaeria nodorum	37.36	2.00e-31	130.00
IUUC-Ppa-095510	Physcomitrella patens	44.44	1.00e-56	214.00
IUUC-Pfo-096212	Poecilia formosa	74.37	0.00e+00	805.00
IUUC-Pab-098482	Pongo abelii	82.03	0.00e+00	994.00
IUUC-Pop-099479	Populus trichocarpa	45.13	1.00e-57	218.00
IUUC-Pca-100776	Procavia capensis	82.22	6.00e-66	245.00
IUUC-Ppe-101595	Prunus persica	39.42	3.00e-19	90.50
IUUC-Pva-102981	Pteropus vampyrus	85.85	0.00e+00	960.00
IUUC-Pgr-103503	Puccinia graminis	33.39	2.00e-69	257.00
IUUC-Ptt-103994	Puccinia triticina	32.75	4.00e-65	243.00
IUUC-Pte-104226	Pyrenophora teres	36.40	2.00e-37	150.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	37.19	2.00e-40	159.00
IUUC-Rno-105225	Rattus norvegicus	81.31	0.00e+00	984.00
IUUC-Sce-106278	Saccharomyces cerevisiae	23.56	4.00e-11	61.60
IUUC-Sha-107353	Sarcophilus harrisii	79.67	0.00e+00	745.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	41.67	2.00e-52	199.00
IUUC-Spo-108266	Schizosaccharomyces pombe	43.07	7.00e-53	201.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	46.79	4.00e-55	209.00
IUUC-Smo-109675	Selaginella moellendorffii	43.57	4.00e-51	196.00
IUUC-Sit-110019	Setaria italica	36.04	2.00e-51	197.00
IUUC-Sly-111621	Solanum lycopersicum	45.36	2.00e-62	233.00
IUUC-Stu-112703	Solanum tuberosum	45.68	1.00e-63	238.00
IUUC-Sar-113166	Sorex araneus	79.42	0.00e+00	902.00
IUUC-Sbi-114746	Sorghum bicolor	36.59	1.00e-52	201.00
IUUC-Sre-115196	Sporisorium reilianum	39.73	5.00e-51	195.00
IUUC-Ssc-115573	Sus scrofa	82.20	0.00e+00	995.00
IUUC-Tgu-117284	Taeniopygia guttata	87.20	0.00e+00	699.00
IUUC-Tru-118236	Takifugu rubripes	84.90	0.00e+00	748.00
IUUC-Tsy-119219	Tarsius syrichta	79.31	0.00e+00	878.00
IUUC-Tni-119929	Tetraodon nigroviridis	78.75	2.00e-103	369.00
IUUC-Tca-121156	Theobroma cacao	43.69	2.00e-58	220.00
IUUC-Tre-122179	Trichoderma reesei	41.09	3.00e-43	169.00
IUUC-Tvi-122326	Trichoderma virens	40.93	6.00e-47	181.00
IUUC-Tae-124733	Triticum aestivum	33.77	4.00e-70	259.00
IUUC-Tur-126352	Triticum urartu	35.53	6.00e-48	185.00
IUUC-Tme-126996	Tuber melanosporum	43.12	1.00e-52	200.00
IUUC-Tbe-127271	Tupaia belangeri	74.24	0.00e+00	853.00
IUUC-Ttr-128433	Tursiops truncatus	82.22	0.00e+00	993.00
IUUC-Uma-129357	Ustilago maydis	36.49	6.00e-44	172.00
IUUC-Vda-130010	Verticillium dahliae	40.43	1.00e-42	167.00
IUUC-Vvi-131734	Vitis vinifera	39.33	4.00e-79	289.00
IUUC-Xtr-132013	Xenopus tropicalis	79.45	0.00e+00	993.00
IUUC-Xma-134244	Xiphophorus maculatus	83.12	0.00e+00	957.00
IUUC-Yli-134579	Yarrowia lipolytica	34.98	6.00e-32	131.00
IUUC-Zma-135716	Zea mays	34.32	3.00e-70	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence