iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049721

Ensembl Protein ID

ENSLACP00000021314.1

UniProt Accession

H3BHE3; H3BHE3_LATCH

Genbank Protein ID

ENSLACP00000021314

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01010229

Gene Name

SHKBP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000018731.1	ENSLACT00000021455.1	ENSLACP00000021314.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-06	26.1	525	544

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 14   tllvsGsdDgtikvWDlrtg 33
           ++l +G  +g+i++WDl+t 
   Q: 525  RYLFTGHANGSIQMWDLTTA 544
           689**************986 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

RFSTSRQTLT WIPDSFFSCL LSGRISTLKD ETGAIFIDRD PAMFSPILNF LRTKELDPRG 60
INIRLLLHEA EFYGITPLGV ELFEFITSKD QNKMKRIKGG GYLHTQTYTR KRTHTLADTQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTTTAGTA CTTCTAGACA GACGTTAACA TGGATTCCGG ATTCGTTCTT CTCCTGGTGA 60
GTCTGATCCC ATTGTCTAGA GGAAGTGGTA GGAGGTGTGT CCAAGTAAAG CCGAGGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR003131--T1-type_BTB
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1

Pfam

PF02214--BTB_2

SMART

SM00225--BTB
SM00320--WD40

Gene Ontology

GO:0051260--P:protein homooligomerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004906	Anolis carolinensis	65.04	0.00e+00	893.00
IUUC-Ame-011252	Astyanax mexicanus	64.05	0.00e+00	896.00
IUUC-Dre-027729	Danio rerio	71.84	0.00e+00	989.00
IUUC-Dor-030553	Dipodomys ordii	64.22	0.00e+00	764.00
IUUC-Gmo-039368	Gadus morhua	76.75	0.00e+00	896.00
IUUC-Gac-041846	Gasterosteus aculeatus	76.28	0.00e+00	890.00
IUUC-Itr-048663	Ictidomys tridecemlineatus	70.50	0.00e+00	837.00
IUUC-Loc-051959	Lepisosteus oculatus	72.02	0.00e+00	1035.00
IUUC-Meu-056159	Macropus eugenii	72.48	0.00e+00	830.00
IUUC-Opr-070600	Ochotona princeps	58.72	0.00e+00	636.00
IUUC-Ont-071375	Oreochromis niloticus	76.18	0.00e+00	934.00
IUUC-Pfo-097224	Poecilia formosa	69.25	0.00e+00	958.00
IUUC-Pca-100847	Procavia capensis	63.83	0.00e+00	712.00
IUUC-Pva-102652	Pteropus vampyrus	71.84	0.00e+00	833.00
IUUC-Sar-113577	Sorex araneus	59.07	4.00e-179	621.00
IUUC-Tru-118507	Takifugu rubripes	74.96	0.00e+00	921.00
IUUC-Tni-120814	Tetraodon nigroviridis	67.59	0.00e+00	910.00
IUUC-Tre-121919	Trichoderma reesei	31.51	2.60e-02	33.50
IUUC-Xtr-132155	Xenopus tropicalis	67.96	0.00e+00	908.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence