iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108754

Ensembl Protein ID

EFJ29263

UniProt Accession

D8RGA6; D8RGA6_SELML

Genbank Protein ID

EFJ29263.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377578

Gene Name

SELMODRAFT_146931

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_146931	EFJ29263	EFJ29263

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-10	40.6	79	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H++ + +l+f  d  ll+s s Dg ++vWDl++ 
   Q: 79   HKS-IKDLDFsLDgALLASTSEDGPCRVWDLDKA 111
           555.999999966599**************9765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MFCLGKVFVS ATFRFVQVEQ GSLSWSPDMD PQRFHGFGEQ KKICFSADGS RVAFGGKDGR 60
LRVLDWPGLT TLIDEPKAHK SIKDLDFSLD GALLASTSED GPCRVWDLDK AMPLTSLHRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTAAACGCA CAAGGGGGCT TAGTTGCTAT GGCGCCGCGT CGGCGCTACT TGGGCGTGTG 60
CTCCTCCACC ACCGGATCCG CCACTTGCGC AGGATGGGCA GCATCCCGCA GCATCGACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0016036--P:cellular response to phosphate starvation
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006817--P:phosphate ion transport

KEGG

smo:SELMODRAFT_146931

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	38.77	8.00e-47	180.00
IUUC-Atr-002477	Amborella trichopoda	51.85	8.00e-78	283.00
IUUC-Bdi-014908	Brachypodium distachyon	41.52	1.00e-55	209.00
IUUC-Cpo-022030	Cavia porcellus	28.63	4.00e-15	74.70
IUUC-Dre-027832	Danio rerio	26.44	3.00e-12	65.50
IUUC-Dme-031901	Drosophila melanogaster	30.47	5.00e-16	78.20
IUUC-Gac-042635	Gasterosteus aculeatus	30.48	2.00e-10	59.30
IUUC-Gma-043653	Glycine max	46.77	2.00e-71	262.00
IUUC-Mtr-058623	Medicago truncatula	46.77	1.00e-71	262.00
IUUC-Mpu-066857	Mustela putorius furo	27.11	2.00e-14	72.40
IUUC-Oba-075552	Oryza barthii	45.04	8.00e-67	246.00
IUUC-Ogl-077345	Oryza glaberrima	45.04	8.00e-67	246.00
IUUC-Ogu-078334	Oryza glumaepatula	45.04	8.00e-67	246.00
IUUC-Oin-079600	Oryza indica	45.42	4.00e-67	247.00
IUUC-Olo-080918	Oryza longistaminata	45.42	4.00e-67	247.00
IUUC-Ome-081986	Oryza meridionalis	45.42	4.00e-67	247.00
IUUC-Oni-082430	Oryza nivara	42.36	3.00e-44	171.00
IUUC-Opu-083902	Oryza punctata	40.73	2.00e-55	208.00
IUUC-Oru-084937	Oryza rufipogon	43.15	3.00e-44	171.00
IUUC-Osa-085881	Oryza sativa	45.42	4.00e-67	247.00
IUUC-Pma-094156	Petromyzon marinus	26.89	2.00e-14	72.80
IUUC-Ppa-095904	Physcomitrella patens	48.54	1.00e-58	219.00
IUUC-Pfo-097488	Poecilia formosa	27.76	3.00e-14	72.00
IUUC-Pop-099307	Populus trichocarpa	47.73	1.00e-62	232.00
IUUC-Pca-100288	Procavia capensis	29.41	1.00e-10	60.50
IUUC-Ppe-101362	Prunus persica	49.04	3.00e-72	265.00
IUUC-Sly-110920	Solanum lycopersicum	45.19	3.00e-59	221.00
IUUC-Stu-112065	Solanum tuberosum	45.19	1.00e-58	219.00
IUUC-Tca-121608	Theobroma cacao	47.19	7.00e-68	249.00
IUUC-Tae-124657	Triticum aestivum	39.19	1.00e-50	192.00
IUUC-Tur-126597	Triticum urartu	38.41	7.00e-49	186.00
IUUC-Vvi-131686	Vitis vinifera	48.73	6.00e-73	266.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence