iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	1.70e-37	127.5	949	1004

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 4    ekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvek 61
           e  ++ y+y++q++deL+l   d+++v+  e+ d gW  g++  +g  G+fP n+v++
   Q: 949  EMYRAVYPYQPQKEDELQLYTNDIIFVV--EKCDDGWFIGTSLRTGDFGIFPGNYVKR 1004
           567899**********************..999***********************97 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MMHHPHPFGS NLANSSEPQQ PSGQYLNPAA DAYNFDTFED SDKFSPKGNV AALRNVIHGQ 60
LDMKTPTGNS SRYQKPAPPP VDSTPSWAKN VKVYEPNGYV DPHLNKHNMG RVLDGPVNPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCATC ATCCTCATCC ATTCGGGTCA AACCTGGCGG TAAGAGCTTT CAATTAATCT 60
ACTCCACAAT CCCTAATTAA TTTCCAGAAC TCATCAGAAC CACAACAGCC ATCTGGTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001452--SH3_domain
IPR003127--SoHo_dom

PROSITE

PS50002--SH3

Pfam

PF14604--SH3_9

SMART

SM00326--SH3
SM00459--Sorb

KEGG

cel:CELE_Y45F10D.13

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001594	Ailuropoda melanoleuca	28.70	2.00e-23	103.00
IUUC-Apl-003194	Anas platyrhynchos	32.58	4.00e-26	112.00
IUUC-Aca-004980	Anolis carolinensis	31.73	1.00e-26	114.00
IUUC-Ame-011108	Astyanax mexicanus	36.94	1.00e-20	95.10
IUUC-Bta-013400	Bos taurus	27.46	9.00e-23	100.00
IUUC-Cja-019686	Callithrix jacchus	28.53	1.00e-24	106.00
IUUC-Cfa-020893	Canis familiaris	27.70	1.00e-23	103.00
IUUC-Cpo-021310	Cavia porcellus	28.28	6.00e-31	127.00
IUUC-Csa-023846	Chlorocebus sabaeus	27.65	7.00e-24	104.00
IUUC-Cho-024653	Choloepus hoffmanni	36.57	1.00e-20	94.40
IUUC-Cin-025274	Ciona intestinalis	33.33	7.00e-16	76.60
IUUC-Dno-029585	Dasypus novemcinctus	34.97	4.00e-20	92.80
IUUC-Dor-031047	Dipodomys ordii	35.95	1.00e-20	94.00
IUUC-Dme-032104	Drosophila melanogaster	31.48	2.00e-29	124.00
IUUC-Ete-033186	Echinops telfairi	33.46	8.00e-25	108.00
IUUC-Eca-034241	Equus caballus	28.90	5.00e-25	108.00
IUUC-Eeu-034908	Erinaceus europaeus	33.79	4.00e-19	88.60
IUUC-Fca-035862	Felis catus	28.41	2.00e-23	102.00
IUUC-Fal-036738	Ficedula albicollis	35.86	5.00e-21	95.90
IUUC-Gmo-039436	Gadus morhua	38.46	5.00e-21	95.50
IUUC-Gga-040705	Gallus gallus	32.83	2.00e-28	119.00
IUUC-Gac-042510	Gasterosteus aculeatus	31.94	6.00e-27	115.00
IUUC-Ggo-045267	Gorilla gorilla	28.24	1.00e-24	107.00
IUUC-Hsa-045761	Homo sapiens	28.24	9.00e-25	107.00
IUUC-Itr-048226	Ictidomys tridecemlineatus	29.08	2.00e-22	99.40
IUUC-Lch-049463	Latimeria chalumnae	36.05	2.00e-19	88.20
IUUC-Loc-052576	Lepisosteus oculatus	29.45	1.00e-21	96.70
IUUC-Laf-053952	Loxodonta africana	36.36	7.00e-20	91.30
IUUC-Mcc-054746	Macaca mulatta	27.65	1.00e-23	103.00
IUUC-Meu-056146	Macropus eugenii	29.78	2.00e-20	93.60
IUUC-Mga-060002	Meleagris gallopavo	31.25	6.00e-20	92.40
IUUC-Mmr-061390	Microcebus murinus	36.07	2.00e-14	72.80
IUUC-Mdo-062951	Monodelphis domestica	25.99	3.00e-19	89.00
IUUC-Mmu-063626	Mus musculus	37.31	1.00e-20	94.40
IUUC-Mpu-065840	Mustela putorius furo	27.83	3.00e-22	99.00
IUUC-Mlu-067378	Myotis lucifugus	33.83	2.00e-14	72.80
IUUC-Nle-069535	Nomascus leucogenys	34.59	5.00e-14	72.00
IUUC-Opr-070844	Ochotona princeps	37.24	1.00e-20	94.40
IUUC-Ont-071980	Oreochromis niloticus	32.97	1.00e-29	124.00
IUUC-Oan-072726	Ornithorhynchus anatinus	32.14	7.00e-21	95.50
IUUC-Ocu-074343	Oryctolagus cuniculus	28.27	2.00e-22	100.00
IUUC-Ola-086962	Oryzias latipes	41.46	3.00e-22	98.60
IUUC-Oga-089133	Otolemur garnettii	35.17	6.00e-21	94.70
IUUC-Oar-090315	Ovis aries	27.19	2.00e-23	103.00
IUUC-Ptr-091119	Pan troglodytes	28.24	9.00e-25	107.00
IUUC-Pan-092158	Papio anubis	27.65	2.00e-23	102.00
IUUC-Psi-093452	Pelodiscus sinensis	30.79	6.00e-28	119.00
IUUC-Pma-094471	Petromyzon marinus	32.92	9.00e-14	70.90
IUUC-Pfo-097237	Poecilia formosa	31.82	1.00e-24	107.00
IUUC-Pab-097675	Pongo abelii	28.53	6.00e-24	104.00
IUUC-Pca-100485	Procavia capensis	29.91	5.00e-33	135.00
IUUC-Pva-102275	Pteropus vampyrus	35.62	2.00e-20	94.00
IUUC-Rno-105918	Rattus norvegicus	26.01	2.00e-22	99.40
IUUC-Sce-106410	Saccharomyces cerevisiae	44.64	5.00e-09	55.10
IUUC-Sha-107564	Sarcophilus harrisii	37.12	2.00e-20	94.00
IUUC-Sja-107956	Schizosaccharomyces japonicus	34.04	6.00e-12	64.70
IUUC-Spo-108101	Schizosaccharomyces pombe	37.00	1.00e-12	67.40
IUUC-Sar-113106	Sorex araneus	36.30	6.00e-21	95.50
IUUC-Ssc-115959	Sus scrofa	29.50	3.00e-22	100.00
IUUC-Tgu-117150	Taeniopygia guttata	33.33	2.00e-27	116.00
IUUC-Tru-117686	Takifugu rubripes	33.59	1.00e-31	130.00
IUUC-Tsy-119376	Tarsius syrichta	35.62	3.00e-20	92.40
IUUC-Tni-119800	Tetraodon nigroviridis	34.21	9.00e-29	120.00
IUUC-Tbe-128007	Tupaia belangeri	28.36	1.00e-23	103.00
IUUC-Ttr-128705	Tursiops truncatus	33.33	2.00e-27	116.00
IUUC-Vpa-130293	Vicugna pacos	36.99	3.00e-21	96.30
IUUC-Xtr-131780	Xenopus tropicalis	32.16	2.00e-22	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence