iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mcc-055346

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

JSUE03014232

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMMUG00000005259.3	ENSMMUT00000007403.3	ENSMMUP00000006959.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-51	168.6	145	181
UBD/Beta-Prp	5.30e-70	237.0	15	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH dsv + +f ++ + l++Gs+D ti++WDlrtg++
   Q: 145  GHRDSVQSSDFsPTvNCLATGSWDTTIRIWDLRTGTP 181
           8***********9999******************986 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
           +++g h + +++ +fspd+++l+tgs+dg++  w++++g+ll++l gh+++v+ ++fspdg +++++s D t+++wd+   kc+++lkg
   Q: 15   KFFGRHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLQVLKG 103
           67899999********************************************************************************* PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           h++sv ++sfsp++  l+sG++d+ +++w++++gq l+ +l gh+++v++  ++p+ n+l++Gs D+t+r+Wdl+tg+
   Q: 104  HQRSVETVSFSPDSRQLASGGWDKRVMLWEVQSGQMLR-LLVGHRDSVQSSDFSPTVNCLATGSWDTTIRIWDLRTGT 180
           **************************************.*************************************98 PP

Organism

Macaca mulatta

Protein Sequence
(Fasta)

MNSGVPATLA VRRVKFFGRH GGEVNSSAFS PDGQMLLTGS EDGCVYGWET RSGQLLWRLG 60
GHTGPVKFCR FSPDGHLFAS ASCDCTVRLW DVARAKCLQV LKGHQRSVET VSFSPDSRQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTCCGCCC AGTCCTGGGG TCCCACGGCC GCCTAGGTGG GAGCCCGCCA GGTCGGGGCG 60
GGGCCGGGCG CCCATGAACA GCGGGGTCCC GGCCACCCTG GCCGTGCGGA GAGTGAAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

KEGG

mcc:693858

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	82.85	3.00e-152	531.00
IUUC-Ang-009841	Aspergillus niger	38.59	1.00e-48	189.00
IUUC-Ame-010858	Astyanax mexicanus	49.15	5.00e-78	284.00
IUUC-Bta-012352	Bos taurus	82.43	2.00e-143	501.00
IUUC-Cja-019585	Callithrix jacchus	89.78	2.00e-167	581.00
IUUC-Cfa-020062	Canis familiaris	78.20	3.00e-125	441.00
IUUC-Csa-023528	Chlorocebus sabaeus	99.04	0.00e+00	635.00
IUUC-Cin-025426	Ciona intestinalis	36.25	2.00e-53	202.00
IUUC-Dre-027740	Danio rerio	52.02	1.00e-51	196.00
IUUC-Dno-030012	Dasypus novemcinctus	71.56	8.00e-134	469.00
IUUC-Dor-030536	Dipodomys ordii	67.25	1.00e-106	379.00
IUUC-Ete-032871	Echinops telfairi	81.47	9.00e-108	382.00
IUUC-Eca-033729	Equus caballus	86.15	2.00e-150	525.00
IUUC-Eeu-034740	Erinaceus europaeus	78.25	2.00e-139	488.00
IUUC-Fca-036514	Felis catus	82.43	1.00e-151	528.00
IUUC-Ggo-044793	Gorilla gorilla	93.63	2.00e-175	607.00
IUUC-Hsa-046414	Homo sapiens	95.56	1.00e-177	615.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	80.34	5.00e-129	453.00
IUUC-Lch-049905	Latimeria chalumnae	51.90	2.00e-89	322.00
IUUC-Loc-052101	Lepisosteus oculatus	51.59	6.00e-84	303.00
IUUC-Laf-053443	Loxodonta africana	79.60	3.00e-141	494.00
IUUC-Meu-056531	Macropus eugenii	63.95	5.00e-82	296.00
IUUC-Mor-057042	Magnaporthe oryzae	29.15	2.00e-33	137.00
IUUC-Mvi-060368	Microbotryum violaceum	30.42	4.00e-33	136.00
IUUC-Mmr-061721	Microcebus murinus	86.15	1.00e-150	525.00
IUUC-Mdo-062379	Monodelphis domestica	63.70	5.00e-109	387.00
IUUC-Mmu-064175	Mus musculus	75.59	2.00e-130	458.00
IUUC-Mpu-066361	Mustela putorius furo	84.12	2.00e-147	514.00
IUUC-Mlu-067300	Myotis lucifugus	62.79	1.00e-95	342.00
IUUC-Ncr-068753	Neurospora crassa	30.98	8.00e-33	135.00
IUUC-Nle-070150	Nomascus leucogenys	95.56	1.00e-169	588.00
IUUC-Opr-071060	Ochotona princeps	71.76	1.00e-113	402.00
IUUC-Ocu-074101	Oryctolagus cuniculus	80.45	7.00e-148	516.00
IUUC-Oga-088479	Otolemur garnettii	84.75	2.00e-146	511.00
IUUC-Oar-089608	Ovis aries	82.65	1.00e-142	499.00
IUUC-Ptr-091521	Pan troglodytes	97.13	0.00e+00	629.00
IUUC-Pan-092092	Papio anubis	99.04	0.00e+00	637.00
IUUC-Pab-098454	Pongo abelii	97.45	2.00e-180	624.00
IUUC-Pca-100981	Procavia capensis	82.75	2.00e-155	541.00
IUUC-Pva-102491	Pteropus vampyrus	80.83	3.00e-148	517.00
IUUC-Pgr-103412	Puccinia graminis	32.42	4.00e-35	142.00
IUUC-Rno-105417	Rattus norvegicus	77.98	4.00e-127	447.00
IUUC-Sha-107649	Sarcophilus harrisii	65.86	2.00e-112	398.00
IUUC-Sar-113110	Sorex araneus	63.76	1.00e-82	299.00
IUUC-Ssc-116197	Sus scrofa	80.51	2.00e-148	517.00
IUUC-Tbe-127734	Tupaia belangeri	81.82	5.00e-78	284.00
IUUC-Ttr-128709	Tursiops truncatus	77.07	2.00e-139	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence