iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036921

Ensembl Protein ID

ENSFALP00000007407.1

UniProt Accession

U3JXA3; U3JXA3_FICAL

Genbank Protein ID

ENSFALP00000007407

Protein Name

Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5

Genbank Nucleotide ID

AGTO01020385

Gene Name

EIF3F; EIF3S5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000007100.1	ENSFALT00000007439.1	ENSFALP00000007407.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	92.22	2.00e-148	522.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ficedula albicollis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

GGRVVRLHPV VLASIVDSFE RRNEGAARVI GTLLGTVDKH SVEVTNCFSV PHNESEDEVA 60
VDMEFAKNMY ELHKKVSPSE IILGWYATGH DITEHSVLIH EYYSREAHNP IHLTVDTSLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG 60
GGGGGGGGGG GGGGCCGCGT GGTGCGCCTG CACCCGGTTG TGCTCGCCTC CATCGTGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0016020--C:membrane
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0075522--P:IRES-dependent viral translational initiation
GO:0016579--P:protein deubiquitination
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	38.25	6.00e-48	184.00
IUUC-Aml-001527	Ailuropoda melanoleuca	92.16	3.00e-148	517.00
IUUC-Atr-002686	Amborella trichopoda	41.44	3.00e-51	194.00
IUUC-Apl-003977	Anas platyrhynchos	99.55	2.00e-132	464.00
IUUC-Aca-004335	Anolis carolinensis	92.96	3.00e-151	527.00
IUUC-Aly-005945	Arabidopsis lyrata	39.54	2.00e-51	195.00
IUUC-Ath-007045	Arabidopsis thaliana	39.16	4.00e-50	191.00
IUUC-Acl-008365	Aspergillus clavatus	36.00	3.00e-44	171.00
IUUC-Afl-008742	Aspergillus flavus	35.66	5.00e-43	167.00
IUUC-Afu-009030	Aspergillus fumigatus	34.56	1.00e-43	169.00
IUUC-Ani-009212	Aspergillus nidulans	35.66	9.00e-44	170.00
IUUC-Ang-009712	Aspergillus niger	35.64	8.00e-43	167.00
IUUC-Aor-009885	Aspergillus oryzae	35.66	1.00e-44	172.00
IUUC-Ate-010315	Aspergillus terreus	35.66	3.00e-42	165.00
IUUC-Ame-010801	Astyanax mexicanus	54.58	1.00e-69	255.00
IUUC-Bgr-011982	Blumeria graminis	36.00	6.00e-43	167.00
IUUC-Bta-012804	Bos taurus	92.59	1.00e-149	522.00
IUUC-Bci-013891	Botrytis cinerea	35.27	7.00e-38	150.00
IUUC-Bdi-014328	Brachypodium distachyon	39.92	1.00e-48	186.00
IUUC-Bol-015446	Brassica oleracea	38.40	3.00e-51	194.00
IUUC-Bra-016862	Brassica rapa	38.78	1.00e-51	196.00
IUUC-Cel-018171	Caenorhabditis elegans	34.84	2.00e-46	178.00
IUUC-Cja-019335	Callithrix jacchus	92.22	2.00e-149	521.00
IUUC-Cfa-020138	Canis familiaris	91.79	2.00e-147	514.00
IUUC-Cpo-022109	Cavia porcellus	81.45	1.00e-127	449.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	39.55	2.00e-59	222.00
IUUC-Csa-023994	Chlorocebus sabaeus	92.22	3.00e-149	521.00
IUUC-Cho-024351	Choloepus hoffmanni	71.48	1.00e-105	376.00
IUUC-Cin-025801	Ciona intestinalis	56.51	6.00e-90	323.00
IUUC-Csv-025805	Ciona savignyi	55.39	3.00e-86	311.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	32.36	2.00e-38	152.00
IUUC-Cne-026868	Cryptococcus neoformans	31.25	3.00e-31	128.00
IUUC-Cme-027328	Cyanidioschyzon merolae	26.67	1.00e-23	103.00
IUUC-Dre-028085	Danio rerio	79.93	7.00e-130	456.00
IUUC-Dno-030099	Dasypus novemcinctus	91.79	1.00e-147	515.00
IUUC-Dor-030324	Dipodomys ordii	83.21	8.00e-130	456.00
IUUC-Dse-031314	Dothistroma septosporum	36.13	1.00e-46	179.00
IUUC-Dme-031926	Drosophila melanogaster	50.37	1.00e-78	285.00
IUUC-Ete-032569	Echinops telfairi	86.30	5.00e-137	479.00
IUUC-Eca-033502	Equus caballus	87.04	5.00e-137	480.00
IUUC-Eeu-034883	Erinaceus europaeus	75.14	4.00e-75	273.00
IUUC-Fca-035873	Felis catus	92.16	5.00e-148	516.00
IUUC-Fox-037765	Fusarium oxysporum	33.09	4.00e-33	134.00
IUUC-Fso-038240	Fusarium solani	33.82	6.00e-36	144.00
IUUC-Gmo-038864	Gadus morhua	79.55	1.00e-130	458.00
IUUC-Ggr-039862	Gaeumannomyces graminis	31.16	2.00e-31	129.00
IUUC-Gga-040952	Gallus gallus	99.63	4.00e-160	556.00
IUUC-Gac-041677	Gasterosteus aculeatus	81.04	2.00e-132	464.00
IUUC-Gma-043061	Glycine max	40.68	7.00e-49	186.00
IUUC-Ggo-045591	Gorilla gorilla	92.22	1.00e-149	522.00
IUUC-Hsa-046860	Homo sapiens	92.22	3.00e-149	521.00
IUUC-Hvu-047410	Hordeum vulgare	31.72	8.00e-21	92.40
IUUC-Itr-048211	Ictidomys tridecemlineatus	91.79	1.00e-147	515.00
IUUC-Lch-049410	Latimeria chalumnae	76.21	7.00e-90	322.00
IUUC-Lpe-051102	Leersia perrieri	40.00	3.00e-48	184.00
IUUC-Loc-052016	Lepisosteus oculatus	73.61	2.00e-116	411.00
IUUC-Lma-053157	Leptosphaeria maculans	35.29	2.00e-45	175.00
IUUC-Laf-054568	Loxodonta africana	91.85	7.00e-149	519.00
IUUC-Mcc-054613	Macaca mulatta	92.22	1.00e-149	522.00
IUUC-Meu-056832	Macropus eugenii	71.90	9.00e-83	298.00
IUUC-Mor-057104	Magnaporthe oryzae	31.32	3.00e-32	132.00
IUUC-Mtr-058445	Medicago truncatula	40.30	3.00e-57	214.00
IUUC-Mla-059038	Melampsora laricipopulina	30.77	4.00e-33	134.00
IUUC-Mga-059548	Meleagris gallopavo	99.58	1.00e-139	488.00
IUUC-Mvi-060520	Microbotryum violaceum	26.60	1.00e-21	97.10
IUUC-Mmr-060577	Microcebus murinus	24.16	1.00e-15	77.00
IUUC-Mdo-062376	Monodelphis domestica	92.91	3.00e-150	523.00
IUUC-Mmu-063254	Mus musculus	91.42	1.00e-146	512.00
IUUC-Mac-065635	Musa acuminata	41.09	2.00e-52	198.00
IUUC-Mpu-066314	Mustela putorius furo	92.16	5.00e-148	516.00
IUUC-Mlu-067512	Myotis lucifugus	91.79	4.00e-147	513.00
IUUC-Nfi-068262	Neosartorya fischeri	34.56	1.00e-43	169.00
IUUC-Ncr-068872	Neurospora crassa	32.73	1.00e-35	143.00
IUUC-Nle-070118	Nomascus leucogenys	92.16	4.00e-148	517.00
IUUC-Opr-071228	Ochotona princeps	91.91	2.00e-129	454.00
IUUC-Ont-072600	Oreochromis niloticus	81.41	6.00e-134	469.00
IUUC-Oan-073584	Ornithorhynchus anatinus	94.49	8.00e-135	472.00
IUUC-Ocu-074542	Oryctolagus cuniculus	92.16	2.00e-148	518.00
IUUC-Oba-075923	Oryza barthii	39.92	4.00e-50	191.00
IUUC-Obr-076313	Oryza brachyantha	40.00	2.00e-49	189.00
IUUC-Ogl-076932	Oryza glaberrima	39.92	4.00e-50	191.00
IUUC-Ogu-078152	Oryza glumaepatula	39.92	4.00e-50	191.00
IUUC-Oin-079528	Oryza indica	39.92	4.00e-50	191.00
IUUC-Olo-080401	Oryza longistaminata	39.92	4.00e-50	191.00
IUUC-Ome-081553	Oryza meridionalis	40.30	2.00e-50	192.00
IUUC-Oni-082090	Oryza nivara	39.92	4.00e-50	191.00
IUUC-Opu-083583	Oryza punctata	40.00	4.00e-49	187.00
IUUC-Oru-084492	Oryza rufipogon	39.92	4.00e-50	191.00
IUUC-Osa-085383	Oryza sativa	39.92	4.00e-50	191.00
IUUC-Ola-086835	Oryzias latipes	79.93	7.00e-131	459.00
IUUC-Olu-087716	Ostreococcus lucimarinus	28.46	3.00e-27	115.00
IUUC-Oga-088886	Otolemur garnettii	91.79	4.00e-148	517.00
IUUC-Oar-090079	Ovis aries	92.59	9.00e-150	522.00
IUUC-Ptr-091457	Pan troglodytes	92.22	3.00e-149	521.00
IUUC-Pan-092317	Papio anubis	90.81	1.00e-97	348.00
IUUC-Psi-093129	Pelodiscus sinensis	89.96	5.00e-137	480.00
IUUC-Pma-094488	Petromyzon marinus	76.58	5.00e-126	443.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.29	2.00e-45	176.00
IUUC-Ppa-095341	Physcomitrella patens	41.57	5.00e-64	237.00
IUUC-Pfo-096286	Poecilia formosa	79.93	7.00e-132	462.00
IUUC-Pab-097765	Pongo abelii	92.22	3.00e-149	521.00
IUUC-Pop-099131	Populus trichocarpa	40.30	3.00e-54	204.00
IUUC-Pca-100524	Procavia capensis	77.35	2.00e-100	358.00
IUUC-Ppe-101934	Prunus persica	41.06	3.00e-58	218.00
IUUC-Pva-102577	Pteropus vampyrus	91.42	4.00e-147	513.00
IUUC-Pgr-103521	Puccinia graminis	30.26	1.00e-31	130.00
IUUC-Ptt-103773	Puccinia triticina	24.73	4.00e-10	58.50
IUUC-Pte-104304	Pyrenophora teres	36.03	5.00e-46	177.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	36.03	3.00e-46	178.00
IUUC-Rno-105717	Rattus norvegicus	91.79	2.00e-147	514.00
IUUC-Sha-107190	Sarcophilus harrisii	93.10	4.00e-146	510.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	34.66	3.00e-44	171.00
IUUC-Spo-108355	Schizosaccharomyces pombe	36.20	7.00e-48	183.00
IUUC-Ssl-108446	Sclerotinia sclerotiorum	30.43	2.00e-03	36.60
IUUC-Smo-109374	Selaginella moellendorffii	44.15	1.00e-67	249.00
IUUC-Sit-110119	Setaria italica	39.54	1.00e-49	189.00
IUUC-Sly-111570	Solanum lycopersicum	38.40	1.00e-47	182.00
IUUC-Stu-112308	Solanum tuberosum	40.51	8.00e-54	203.00
IUUC-Sar-113515	Sorex araneus	91.49	3.00e-48	183.00
IUUC-Sbi-114605	Sorghum bicolor	39.54	1.00e-49	190.00
IUUC-Sre-114906	Sporisorium reilianum	40.59	1.00e-55	209.00
IUUC-Tgu-117087	Taeniopygia guttata	98.31	9.00e-138	481.00
IUUC-Tru-117700	Takifugu rubripes	78.81	4.00e-130	457.00
IUUC-Tni-120470	Tetraodon nigroviridis	80.30	2.00e-131	461.00
IUUC-Tca-121109	Theobroma cacao	39.92	2.00e-48	185.00
IUUC-Tre-122095	Trichoderma reesei	33.70	1.00e-34	140.00
IUUC-Tvi-122580	Trichoderma virens	33.33	6.00e-34	137.00
IUUC-Tae-125129	Triticum aestivum	40.68	5.00e-52	197.00
IUUC-Tur-126658	Triticum urartu	35.58	5.00e-44	171.00
IUUC-Tme-127043	Tuber melanosporum	38.20	1.00e-48	186.00
IUUC-Tbe-127927	Tupaia belangeri	92.16	5.00e-148	516.00
IUUC-Ttr-129231	Tursiops truncatus	92.54	2.00e-148	518.00
IUUC-Uma-129578	Ustilago maydis	40.22	2.00e-54	205.00
IUUC-Vda-129730	Verticillium dahliae	33.09	1.00e-40	159.00
IUUC-Vpa-130677	Vicugna pacos	60.58	9.00e-39	154.00
IUUC-Vvi-130968	Vitis vinifera	41.06	4.00e-54	204.00
IUUC-Xtr-132203	Xenopus tropicalis	85.50	3.00e-139	487.00
IUUC-Xma-133972	Xiphophorus maculatus	79.55	1.00e-131	461.00
IUUC-Yli-134553	Yarrowia lipolytica	35.96	1.00e-40	160.00
IUUC-Zma-134941	Zea mays	40.75	2.00e-46	178.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence