iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132079

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01121439

Gene Name

rab40b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000022807.3	ENSXETT00000049345.3	ENSXETP00000049345.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.00e-14	54.3	184	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           lw +++++ SLq+LC++aI++c++ + +   dkLPLP +L+++L+++++
   Q: 184  LW-RPNKVLSLQDLCCRAIVSCTPVHLV---DKLPLPVALRSHLKSFSM 228
           66.99********************888...***************976 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

RMTHRASPVK AYDFLLKFLL VGDSDVGKGE ILASLQDGCT ESPYGYNMGI DYKTTTILLD 60
GRRIKLQLWD TSGQGRFCTI FRSYSRGAQG VILVYDITNR WSFDGIDRWI KEIDEHAPGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCTGGAG GGACAGGTAG GTGCTACTGT ATGGCACTGC CCCGGGCTTT GCCCTGTCTA 60
ACCTGTGGGG CAGTGTGTGG GGTAAATGTA TTGGGGGGGA TAATAAGAGC AGGGAACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005768--C:endosome
GO:0005886--C:plasma membrane
GO:0008021--C:synaptic vesicle
GO:0005525--F:GTP binding
GO:0072659--P:protein localization to plasma membrane
GO:0009306--P:protein secretion
GO:0007264--P:small GTPase mediated signal transduction
GO:0006904--P:vesicle docking involved in exocytosis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	79.85	1.00e-125	442.00
IUUC-Apl-003206	Anas platyrhynchos	97.40	4.00e-135	473.00
IUUC-Aca-005004	Anolis carolinensis	94.42	2.00e-144	504.00
IUUC-Ame-011456	Astyanax mexicanus	88.53	4.00e-152	530.00
IUUC-Bta-012683	Bos taurus	82.73	2.00e-140	491.00
IUUC-Cja-018870	Callithrix jacchus	82.37	8.00e-136	475.00
IUUC-Cfa-020527	Canis familiaris	87.62	3.00e-112	397.00
IUUC-Cpo-021644	Cavia porcellus	86.19	4.00e-139	486.00
IUUC-Csa-023150	Chlorocebus sabaeus	88.85	1.00e-151	528.00
IUUC-Cho-024716	Choloepus hoffmanni	89.02	6.00e-86	309.00
IUUC-Dre-028614	Danio rerio	88.17	3.00e-149	520.00
IUUC-Dno-029998	Dasypus novemcinctus	77.45	1.00e-103	371.00
IUUC-Dor-030584	Dipodomys ordii	69.96	7.00e-93	332.00
IUUC-Dme-031810	Drosophila melanogaster	61.25	9.00e-94	335.00
IUUC-Ete-033080	Echinops telfairi	76.87	2.00e-123	434.00
IUUC-Eca-033492	Equus caballus	87.98	6.00e-127	446.00
IUUC-Eeu-034590	Erinaceus europaeus	74.14	4.00e-97	346.00
IUUC-Fca-035705	Felis catus	87.88	2.00e-124	437.00
IUUC-Fal-037070	Ficedula albicollis	78.65	9.00e-131	459.00
IUUC-Gmo-039605	Gadus morhua	80.65	9.00e-140	488.00
IUUC-Gga-040925	Gallus gallus	93.88	8.00e-158	548.00
IUUC-Gac-041833	Gasterosteus aculeatus	76.22	2.00e-131	461.00
IUUC-Ggo-045012	Gorilla gorilla	82.01	9.00e-136	475.00
IUUC-Hsa-046747	Homo sapiens	88.49	8.00e-151	525.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	78.29	5.00e-130	456.00
IUUC-Lch-050193	Latimeria chalumnae	81.36	7.00e-143	499.00
IUUC-Loc-052325	Lepisosteus oculatus	90.36	1.00e-154	538.00
IUUC-Laf-053340	Loxodonta africana	87.05	7.00e-145	505.00
IUUC-Mcc-054711	Macaca mulatta	87.19	5.00e-149	520.00
IUUC-Meu-056731	Macropus eugenii	73.05	3.00e-67	248.00
IUUC-Mga-059204	Meleagris gallopavo	93.55	8.00e-158	548.00
IUUC-Mmr-061380	Microcebus murinus	78.78	7.00e-130	456.00
IUUC-Mdo-062438	Monodelphis domestica	78.37	6.00e-131	459.00
IUUC-Mmu-064144	Mus musculus	86.69	2.00e-148	517.00
IUUC-Mpu-066352	Mustela putorius furo	87.88	2.00e-124	437.00
IUUC-Mlu-067741	Myotis lucifugus	78.72	3.00e-131	460.00
IUUC-Nle-070096	Nomascus leucogenys	88.13	1.00e-149	521.00
IUUC-Opr-070662	Ochotona princeps	83.09	3.00e-139	486.00
IUUC-Ont-072397	Oreochromis niloticus	85.96	4.00e-146	509.00
IUUC-Oan-073432	Ornithorhynchus anatinus	78.54	3.00e-107	380.00
IUUC-Ocu-074559	Oryctolagus cuniculus	87.05	1.00e-137	482.00
IUUC-Olo-080270	Oryza longistaminata	30.77	2.00e-12	66.60
IUUC-Ola-086486	Oryzias latipes	77.99	3.00e-127	447.00
IUUC-Oga-088133	Otolemur garnettii	85.97	5.00e-147	513.00
IUUC-Oar-089702	Ovis aries	83.48	4.00e-117	413.00
IUUC-Ptr-090544	Pan troglodytes	87.74	2.00e-139	488.00
IUUC-Pan-092812	Papio anubis	88.85	1.00e-151	528.00
IUUC-Psi-093120	Pelodiscus sinensis	96.76	2.00e-162	564.00
IUUC-Pma-094679	Petromyzon marinus	79.66	2.00e-114	404.00
IUUC-Pfo-097105	Poecilia formosa	81.79	2.00e-140	491.00
IUUC-Pab-098735	Pongo abelii	88.85	1.00e-151	528.00
IUUC-Pca-100775	Procavia capensis	83.89	6.00e-77	279.00
IUUC-Pva-102658	Pteropus vampyrus	78.29	5.00e-130	456.00
IUUC-Rno-105063	Rattus norvegicus	88.13	3.00e-150	523.00
IUUC-Sha-106536	Sarcophilus harrisii	78.37	6.00e-131	459.00
IUUC-Sar-113518	Sorex araneus	79.69	2.00e-119	421.00
IUUC-Ssc-115719	Sus scrofa	84.33	5.00e-137	479.00
IUUC-Tgu-116858	Taeniopygia guttata	82.90	4.00e-98	349.00
IUUC-Tru-118264	Takifugu rubripes	67.46	6.00e-126	443.00
IUUC-Tsy-119011	Tarsius syrichta	88.42	5.00e-102	362.00
IUUC-Tni-120350	Tetraodon nigroviridis	82.14	3.00e-140	490.00
IUUC-Ttr-129236	Tursiops truncatus	78.65	2.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence