iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000770

Ensembl Protein ID

EMT30328

UniProt Accession

M8C8D4; M8C8D4_AEGTA

Genbank Protein ID

EMT30328.1

Protein Name

Putative DNA repair protein RAD23

Genbank Nucleotide ID

KD505674

Gene Name

F775_30359

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_30359	EMT30328	EMT30328

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.20e-19	69.7	207	247
ULD/UDP/UBQ/UBQ_PIM	6.00e-15	55.7	65	120

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           e  ++ + eMG   +dr+++l+aLraa+nn+e+AveyL++g
   Q: 207  EATIQSILEMGggtWDRDTVLRALRAAFNNPERAVEYLYSG 247
           6789**********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 23   veelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           v+++K++i++++g   +p++qq LIy+G +LkD+ttL+e+++ ++++++++++++k
   Q: 65   VSDVKKLIESSQGqnvYPADQQMLIYQGTVLKDETTLEENKVVENNFLVIMLRQNK 120
           89***************************************************987 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MQSLSNQGSL PNNHRCKILG SLPCGYMVWG YVGFRFYQHG RIIGGSLPNN RRCKDMGSLQ 60
CGYMVSDVKK LIESSQGQNV YPADQQMLIY QGTVLKDETT LEENKVVENN FLVIMLRQNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGTCAC TAAGTAACCA AGGATCTTTG CCAAACAATC ATAGGTGTAA GATACTGGGG 60
TCTTTGCCGT GTGGTTACAT GGTATGGGGT TATGTAGGCT TTAGATTCTA CCAGCATGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ats:F775_30359

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001515	Ailuropoda melanoleuca	38.11	4.00e-29	121.00
IUUC-Atr-003116	Amborella trichopoda	67.98	6.00e-79	286.00
IUUC-Apl-003371	Anas platyrhynchos	37.20	2.00e-27	116.00
IUUC-Aca-004704	Anolis carolinensis	32.80	2.00e-28	118.00
IUUC-Aly-005498	Arabidopsis lyrata	65.34	8.00e-81	293.00
IUUC-Ath-006688	Arabidopsis thaliana	65.60	4.00e-80	290.00
IUUC-Acl-008212	Aspergillus clavatus	37.45	1.00e-26	112.00
IUUC-Afl-008605	Aspergillus flavus	41.34	3.00e-29	122.00
IUUC-Afu-008877	Aspergillus fumigatus	38.10	3.00e-27	115.00
IUUC-Ani-009460	Aspergillus nidulans	40.16	7.00e-28	117.00
IUUC-Aor-010032	Aspergillus oryzae	41.34	2.00e-29	122.00
IUUC-Ate-010458	Aspergillus terreus	39.76	5.00e-28	117.00
IUUC-Ame-011107	Astyanax mexicanus	46.94	1.00e-14	73.60
IUUC-Bgr-012056	Blumeria graminis	48.46	3.00e-16	78.60
IUUC-Bta-012922	Bos taurus	36.48	2.00e-28	119.00
IUUC-Bci-013933	Botrytis cinerea	31.17	7.00e-27	114.00
IUUC-Bdi-014253	Brachypodium distachyon	94.37	3.00e-153	533.00
IUUC-Bol-016493	Brassica oleracea	66.40	2.00e-84	305.00
IUUC-Bra-017582	Brassica rapa	66.40	3.00e-84	304.00
IUUC-Cel-018364	Caenorhabditis elegans	30.87	2.00e-11	62.80
IUUC-Cja-018946	Callithrix jacchus	38.52	1.00e-29	123.00
IUUC-Cfa-020683	Canis familiaris	40.95	5.00e-16	78.20
IUUC-Cpo-021850	Cavia porcellus	33.33	7.00e-38	150.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.43	4.00e-16	78.20
IUUC-Csa-023183	Chlorocebus sabaeus	38.87	9.00e-30	123.00
IUUC-Cho-024814	Choloepus hoffmanni	39.82	2.00e-16	79.70
IUUC-Cin-025741	Ciona intestinalis	26.11	1.00e-17	82.80
IUUC-Cne-027056	Cryptococcus neoformans	57.14	2.00e-10	59.70
IUUC-Cme-027260	Cyanidioschyzon merolae	28.57	7.00e-21	94.40
IUUC-Dre-028369	Danio rerio	38.06	1.00e-33	136.00
IUUC-Dno-030017	Dasypus novemcinctus	37.70	5.00e-28	117.00
IUUC-Dor-030358	Dipodomys ordii	39.75	2.00e-31	129.00
IUUC-Dme-032027	Drosophila melanogaster	28.85	4.00e-24	104.00
IUUC-Eca-034243	Equus caballus	36.48	4.00e-28	118.00
IUUC-Eeu-034721	Erinaceus europaeus	33.33	2.00e-16	79.00
IUUC-Fca-035679	Felis catus	36.89	1.00e-27	116.00
IUUC-Fox-037960	Fusarium oxysporum	49.24	4.00e-20	91.70
IUUC-Gmo-039080	Gadus morhua	37.86	3.00e-25	108.00
IUUC-Ggr-040116	Gaeumannomyces graminis	47.83	1.00e-20	93.20
IUUC-Gac-042298	Gasterosteus aculeatus	32.53	7.00e-33	133.00
IUUC-Gma-043937	Glycine max	65.06	3.00e-88	318.00
IUUC-Ggo-045084	Gorilla gorilla	38.52	9.00e-30	123.00
IUUC-Hsa-046614	Homo sapiens	38.87	9.00e-30	123.00
IUUC-Hvu-047832	Hordeum vulgare	97.99	7.00e-125	439.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	32.80	2.00e-36	145.00
IUUC-Kpa-049314	Komagataella pastoris	36.14	8.00e-27	113.00
IUUC-Lch-050553	Latimeria chalumnae	45.71	2.00e-14	72.40
IUUC-Lpe-051087	Leersia perrieri	82.07	5.00e-111	393.00
IUUC-Loc-051748	Lepisosteus oculatus	37.34	6.00e-29	120.00
IUUC-Laf-054293	Loxodonta africana	36.76	7.00e-26	110.00
IUUC-Mcc-055860	Macaca mulatta	38.87	9.00e-30	123.00
IUUC-Meu-056459	Macropus eugenii	39.34	6.00e-31	127.00
IUUC-Mor-057287	Magnaporthe oryzae	52.54	5.00e-18	84.70
IUUC-Mpo-057609	Magnaporthe poae	48.09	2.00e-20	92.00
IUUC-Mmr-060819	Microcebus murinus	32.27	1.00e-36	145.00
IUUC-Mdo-062742	Monodelphis domestica	32.55	1.00e-42	166.00
IUUC-Mmu-063929	Mus musculus	33.07	4.00e-36	144.00
IUUC-Mpu-066389	Mustela putorius furo	40.95	3.00e-16	79.00
IUUC-Mlu-067787	Myotis lucifugus	32.63	2.00e-33	135.00
IUUC-Nfi-068390	Neosartorya fischeri	38.49	3.00e-27	115.00
IUUC-Ncr-068685	Neurospora crassa	39.23	3.00e-30	125.00
IUUC-Nle-069655	Nomascus leucogenys	36.65	2.00e-26	112.00
IUUC-Ont-072484	Oreochromis niloticus	36.98	4.00e-30	125.00
IUUC-Oan-073572	Ornithorhynchus anatinus	37.30	5.00e-24	104.00
IUUC-Ocu-073793	Oryctolagus cuniculus	32.05	2.00e-24	105.00
IUUC-Oba-075392	Oryza barthii	80.08	4.00e-108	384.00
IUUC-Ogl-077021	Oryza glaberrima	66.67	2.00e-116	411.00
IUUC-Ogu-078883	Oryza glumaepatula	80.08	3.00e-108	384.00
IUUC-Oin-079817	Oryza indica	79.68	1.00e-107	382.00
IUUC-Olo-080929	Oryza longistaminata	79.68	1.00e-107	382.00
IUUC-Ome-081866	Oryza meridionalis	80.08	3.00e-108	384.00
IUUC-Oni-083092	Oryza nivara	79.68	1.00e-107	382.00
IUUC-Opu-083756	Oryza punctata	82.26	1.00e-109	389.00
IUUC-Oru-084816	Oryza rufipogon	79.68	1.00e-107	382.00
IUUC-Osa-086112	Oryza sativa	79.68	1.00e-107	382.00
IUUC-Ola-086540	Oryzias latipes	32.59	4.00e-25	108.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.68	5.00e-41	160.00
IUUC-Oga-088023	Otolemur garnettii	35.80	2.00e-26	112.00
IUUC-Oar-089964	Ovis aries	36.90	6.00e-28	117.00
IUUC-Ptr-090912	Pan troglodytes	38.87	1.00e-29	123.00
IUUC-Pan-092140	Papio anubis	38.52	9.00e-30	123.00
IUUC-Ppa-095964	Physcomitrella patens	60.80	1.00e-66	246.00
IUUC-Pfo-096607	Poecilia formosa	40.74	8.00e-30	123.00
IUUC-Pab-097738	Pongo abelii	38.52	1.00e-29	123.00
IUUC-Pop-099642	Populus trichocarpa	66.53	3.00e-83	301.00
IUUC-Pca-100348	Procavia capensis	38.52	1.00e-29	123.00
IUUC-Pva-102137	Pteropus vampyrus	36.00	8.00e-29	120.00
IUUC-Pgr-103641	Puccinia graminis	35.40	7.00e-23	100.00
IUUC-Ptt-103717	Puccinia triticina	39.47	5.00e-32	131.00
IUUC-Pte-104303	Pyrenophora teres	37.93	1.00e-20	93.20
IUUC-Pyt-104580	Pyrenophora triticirepentis	37.98	3.00e-20	92.00
IUUC-Rno-105569	Rattus norvegicus	38.11	9.00e-30	123.00
IUUC-Sce-106214	Saccharomyces cerevisiae	33.82	4.00e-12	65.10
IUUC-Sha-106918	Sarcophilus harrisii	32.55	2.00e-35	142.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.96	8.00e-33	133.00
IUUC-Sit-110235	Setaria italica	61.45	2.00e-69	255.00
IUUC-Sly-111480	Solanum lycopersicum	60.16	2.00e-108	384.00
IUUC-Stu-112054	Solanum tuberosum	59.62	2.00e-105	374.00
IUUC-Sar-112925	Sorex araneus	35.95	5.00e-23	101.00
IUUC-Sbi-113871	Sorghum bicolor	81.56	6.00e-98	350.00
IUUC-Sre-114894	Sporisorium reilianum	64.44	1.00e-11	63.50
IUUC-Ssc-116329	Sus scrofa	36.48	3.00e-28	119.00
IUUC-Tru-117920	Takifugu rubripes	40.52	4.00e-37	148.00
IUUC-Tni-120493	Tetraodon nigroviridis	39.66	3.00e-37	148.00
IUUC-Tre-121911	Trichoderma reesei	40.00	2.00e-27	115.00
IUUC-Tvi-122617	Trichoderma virens	40.50	1.00e-26	113.00
IUUC-Tae-125354	Triticum aestivum	98.66	6.00e-148	516.00
IUUC-Tur-126610	Triticum urartu	98.72	1.00e-156	545.00
IUUC-Tme-127092	Tuber melanosporum	48.55	2.00e-22	99.40
IUUC-Tbe-127493	Tupaia belangeri	40.95	3.00e-16	78.60
IUUC-Ttr-129232	Tursiops truncatus	38.52	1.00e-29	123.00
IUUC-Uma-129484	Ustilago maydis	57.41	4.00e-13	68.60
IUUC-Vda-129946	Verticillium dahliae	48.55	1.00e-21	96.70
IUUC-Vvi-130842	Vitis vinifera	66.53	2.00e-87	315.00
IUUC-Xma-133503	Xiphophorus maculatus	35.55	4.00e-33	134.00
IUUC-Yli-134615	Yarrowia lipolytica	37.72	2.00e-29	122.00
IUUC-Zma-135678	Zea mays	76.23	2.00e-96	345.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence