iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022086

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02010411

Gene Name

RNF6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000009120.3	ENSCPOT00000009203.2	ENSCPOP00000008189.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-06	26.7	579	620

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +d+   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 579  CSVCISDYvtGNKLRQLPCMHEFHIHCIDRW------LSENCTCPICR 620
           9*******7744499****************......**********8 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MNQSRSRSGS GGEETLSQDH NHHENGRRWQ QERLLREEAY YQFINELNDE DYRLMRDHNL 60
LGTPGEITSE ELQQRLDGVK EQLASQADLR PGTINRDAAV PRESSNEDSL LEWLHAFRLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATCAGT CTAGATCTAG ATCAGGTAGT GGTGGTGAAG AAACCTTATC TCAGGACCAT 60
AATCATCATG AAAATGGGAG AAGATGGCAG CAGGAACGCC TCCTTAGAGA AGAAGCCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030424--C:axon
GO:0005737--C:cytoplasm
GO:0031965--C:nuclear membrane
GO:0016605--C:PML body
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030517--P:negative regulation of axon extension
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0044314--P:protein K27-linked ubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0085020--P:protein K6-linked ubiquitination
GO:0060765--P:regulation of androgen receptor signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000811	Aegilops tauschii	37.29	3.00e-08	51.20
IUUC-Aml-001415	Ailuropoda melanoleuca	74.96	0.00e+00	850.00
IUUC-Apl-003834	Anas platyrhynchos	53.63	1.00e-154	540.00
IUUC-Aca-004373	Anolis carolinensis	46.44	2.00e-81	296.00
IUUC-Ath-006611	Arabidopsis thaliana	42.53	6.00e-16	78.20
IUUC-Ame-011730	Astyanax mexicanus	55.80	3.00e-66	246.00
IUUC-Bta-012763	Bos taurus	73.02	2.00e-163	569.00
IUUC-Bol-015504	Brassica oleracea	43.66	3.00e-14	71.60
IUUC-Bra-017280	Brassica rapa	46.48	8.00e-15	73.60
IUUC-Cja-018980	Callithrix jacchus	73.58	0.00e+00	849.00
IUUC-Cfa-020416	Canis familiaris	74.71	0.00e+00	862.00
IUUC-Csa-023246	Chlorocebus sabaeus	74.89	0.00e+00	893.00
IUUC-Cho-024749	Choloepus hoffmanni	70.05	0.00e+00	678.00
IUUC-Dno-029617	Dasypus novemcinctus	73.47	0.00e+00	834.00
IUUC-Dor-030800	Dipodomys ordii	74.85	2.00e-121	429.00
IUUC-Ete-032882	Echinops telfairi	77.18	7.00e-66	245.00
IUUC-Eca-033892	Equus caballus	73.61	0.00e+00	905.00
IUUC-Eeu-034563	Erinaceus europaeus	73.09	2.00e-79	290.00
IUUC-Fca-035765	Felis catus	74.08	0.00e+00	843.00
IUUC-Fal-036981	Ficedula albicollis	54.38	5.00e-94	338.00
IUUC-Gmo-039344	Gadus morhua	56.30	1.00e-78	287.00
IUUC-Gga-041114	Gallus gallus	55.52	2.00e-83	303.00
IUUC-Gac-042220	Gasterosteus aculeatus	56.83	2.00e-78	286.00
IUUC-Ggo-044902	Gorilla gorilla	75.29	0.00e+00	905.00
IUUC-Hsa-046548	Homo sapiens	75.04	0.00e+00	903.00
IUUC-Hvu-047764	Hordeum vulgare	55.56	1.00e-13	70.10
IUUC-Itr-048447	Ictidomys tridecemlineatus	75.55	0.00e+00	929.00
IUUC-Lch-050541	Latimeria chalumnae	46.92	5.00e-76	278.00
IUUC-Laf-054296	Loxodonta africana	70.13	0.00e+00	765.00
IUUC-Mcc-054858	Macaca mulatta	74.89	0.00e+00	916.00
IUUC-Meu-056296	Macropus eugenii	62.81	8.00e-128	450.00
IUUC-Mga-059307	Meleagris gallopavo	55.33	1.00e-82	300.00
IUUC-Mmr-060699	Microcebus murinus	75.26	0.00e+00	915.00
IUUC-Mdo-062162	Monodelphis domestica	59.61	0.00e+00	635.00
IUUC-Mmu-064188	Mus musculus	64.57	0.00e+00	687.00
IUUC-Mac-065618	Musa acuminata	43.10	4.00e-14	70.90
IUUC-Mpu-065891	Mustela putorius furo	74.38	0.00e+00	855.00
IUUC-Mlu-067177	Myotis lucifugus	72.75	0.00e+00	798.00
IUUC-Nle-069127	Nomascus leucogenys	75.77	0.00e+00	927.00
IUUC-Ocu-074281	Oryctolagus cuniculus	87.50	5.00e-65	239.00
IUUC-Oba-075544	Oryza barthii	43.66	1.00e-13	68.90
IUUC-Ogl-077537	Oryza glaberrima	43.66	2.00e-13	68.90
IUUC-Ogu-078674	Oryza glumaepatula	36.71	4.00e-13	67.80
IUUC-Oin-079590	Oryza indica	43.66	2.00e-13	68.60
IUUC-Ome-081556	Oryza meridionalis	39.00	3.00e-14	71.60
IUUC-Oni-082676	Oryza nivara	43.66	1.00e-13	68.90
IUUC-Opu-083606	Oryza punctata	40.28	3.00e-12	66.20
IUUC-Oru-084832	Oryza rufipogon	43.66	2.00e-13	68.60
IUUC-Osa-086155	Oryza sativa	43.66	2.00e-13	68.60
IUUC-Oga-088750	Otolemur garnettii	75.11	0.00e+00	905.00
IUUC-Oar-089523	Ovis aries	73.23	4.00e-157	548.00
IUUC-Ptr-091533	Pan troglodytes	75.04	0.00e+00	904.00
IUUC-Pan-092675	Papio anubis	74.45	0.00e+00	893.00
IUUC-Psi-093735	Pelodiscus sinensis	54.61	1.00e-165	576.00
IUUC-Pfo-096637	Poecilia formosa	47.42	8.00e-62	231.00
IUUC-Pab-098486	Pongo abelii	75.18	0.00e+00	926.00
IUUC-Pop-099068	Populus trichocarpa	43.24	3.00e-15	74.30
IUUC-Pca-100143	Procavia capensis	67.06	1.00e-134	473.00
IUUC-Pva-103151	Pteropus vampyrus	68.81	0.00e+00	799.00
IUUC-Rno-105745	Rattus norvegicus	64.32	0.00e+00	632.00
IUUC-Sha-106681	Sarcophilus harrisii	59.62	0.00e+00	640.00
IUUC-Smo-109214	Selaginella moellendorffii	49.35	3.00e-15	75.50
IUUC-Sit-109747	Setaria italica	30.34	7.00e-14	70.50
IUUC-Sar-113229	Sorex araneus	67.93	1.00e-99	357.00
IUUC-Sbi-114355	Sorghum bicolor	37.50	2.00e-13	68.20
IUUC-Ssc-115345	Sus scrofa	57.41	1.00e-75	277.00
IUUC-Tgu-117477	Taeniopygia guttata	52.88	2.00e-91	330.00
IUUC-Tsy-119338	Tarsius syrichta	73.68	2.00e-138	486.00
IUUC-Tca-120922	Theobroma cacao	50.91	2.00e-14	73.20
IUUC-Tur-125977	Triticum urartu	37.63	2.00e-13	69.70
IUUC-Tbe-127505	Tupaia belangeri	60.46	6.00e-89	321.00
IUUC-Ttr-128367	Tursiops truncatus	68.91	0.00e+00	701.00
IUUC-Vpa-130480	Vicugna pacos	65.85	2.00e-107	383.00
IUUC-Xma-133863	Xiphophorus maculatus	48.29	7.00e-64	238.00
IUUC-Yli-134656	Yarrowia lipolytica	48.94	2.00e-10	60.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence