iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117477

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01007550

Gene Name

RNF6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000011529.1	ENSTGUT00000012014.1	ENSTGUP00000011884.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.70e-08	32.4	611	652

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 611  CSVCINEYatGNKLRQLPCAHEFHIHCIDRW------LSENSTCPICR 652
           ********66333999***************......**********8 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MDRSRHRAGN GNEQVPSRER SGEGERQRQL ERLGREEAYY QFINELNEED YRLMRDRNLL 60
GTPGEITAEE LQQRLEGAKE CLTSQSDLDN REGEDSEVLG ENSNGDSLLE WLNTFRRTGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCGCT CCCGACACCG TGCGGGAAAT GGCAATGAGC AGGTGCCTTC ACGGGAGCGC 60
AGCGGTGAAG GTGAGAGACA GCGGCAGCTG GAGCGCCTCG GCAGAGAGGA AGCGTATTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030424--C:axon
GO:0005737--C:cytoplasm
GO:0031965--C:nuclear membrane
GO:0016605--C:PML body
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030517--P:negative regulation of axon extension
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0044314--P:protein K27-linked ubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0085020--P:protein K6-linked ubiquitination
GO:0060765--P:regulation of androgen receptor signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	52.83	5.00e-14	71.60
IUUC-Aml-001415	Ailuropoda melanoleuca	56.58	4.00e-168	584.00
IUUC-Atr-002798	Amborella trichopoda	47.69	4.00e-13	68.20
IUUC-Apl-003834	Anas platyrhynchos	80.30	0.00e+00	923.00
IUUC-Aca-004373	Anolis carolinensis	54.03	6.00e-156	543.00
IUUC-Aly-005870	Arabidopsis lyrata	43.43	2.00e-20	92.80
IUUC-Ath-006611	Arabidopsis thaliana	43.43	2.00e-20	92.80
IUUC-Ame-011730	Astyanax mexicanus	71.08	2.00e-99	355.00
IUUC-Bta-012763	Bos taurus	52.22	5.00e-105	374.00
IUUC-Bdi-014880	Brachypodium distachyon	44.30	2.00e-15	75.90
IUUC-Bol-015406	Brassica oleracea	41.89	2.00e-15	76.30
IUUC-Bra-016948	Brassica rapa	41.89	2.00e-15	76.30
IUUC-Cja-018980	Callithrix jacchus	56.63	7.00e-175	607.00
IUUC-Cfa-020416	Canis familiaris	56.48	3.00e-170	591.00
IUUC-Cpo-022086	Cavia porcellus	54.06	5.00e-95	341.00
IUUC-Csa-023246	Chlorocebus sabaeus	58.45	5.00e-173	600.00
IUUC-Cho-024749	Choloepus hoffmanni	57.07	3.00e-138	485.00
IUUC-Cme-027313	Cyanidioschyzon merolae	50.00	1.00e-11	63.90
IUUC-Dre-028428	Danio rerio	69.20	2.00e-98	352.00
IUUC-Dno-029617	Dasypus novemcinctus	56.40	4.00e-166	577.00
IUUC-Dor-030800	Dipodomys ordii	61.25	2.00e-68	253.00
IUUC-Ete-032882	Echinops telfairi	58.10	5.00e-103	368.00
IUUC-Eca-033892	Equus caballus	57.06	7.00e-171	593.00
IUUC-Eeu-034563	Erinaceus europaeus	62.12	7.00e-75	274.00
IUUC-Fca-035765	Felis catus	56.09	2.00e-161	562.00
IUUC-Fal-036981	Ficedula albicollis	92.25	0.00e+00	1049.00
IUUC-Gmo-039344	Gadus morhua	70.21	2.00e-107	382.00
IUUC-Ggr-039947	Gaeumannomyces graminis	48.89	7.00e-12	65.10
IUUC-Gga-041114	Gallus gallus	77.91	0.00e+00	816.00
IUUC-Gac-042220	Gasterosteus aculeatus	70.53	1.00e-107	383.00
IUUC-Gma-043155	Glycine max	39.73	8.00e-16	76.30
IUUC-Ggo-044902	Gorilla gorilla	57.08	0.00e+00	629.00
IUUC-Hsa-046548	Homo sapiens	57.70	0.00e+00	632.00
IUUC-Hvu-047545	Hordeum vulgare	40.00	6.00e-16	77.80
IUUC-Itr-048447	Ictidomys tridecemlineatus	56.54	5.00e-177	613.00
IUUC-Lpe-051589	Leersia perrieri	42.50	1.00e-15	77.40
IUUC-Laf-054296	Loxodonta africana	57.32	1.00e-162	566.00
IUUC-Mcc-054858	Macaca mulatta	57.51	4.00e-175	607.00
IUUC-Meu-056296	Macropus eugenii	57.30	3.00e-108	384.00
IUUC-Mpo-057470	Magnaporthe poae	48.89	3.00e-12	66.20
IUUC-Mga-059307	Meleagris gallopavo	74.11	0.00e+00	790.00
IUUC-Mmr-060699	Microcebus murinus	56.87	2.00e-172	598.00
IUUC-Mdo-062162	Monodelphis domestica	65.37	2.00e-119	422.00
IUUC-Mmu-064188	Mus musculus	54.48	1.00e-150	526.00
IUUC-Mac-064534	Musa acuminata	40.66	2.00e-15	75.90
IUUC-Mpu-065891	Mustela putorius furo	55.83	1.00e-163	569.00
IUUC-Mlu-067177	Myotis lucifugus	55.18	1.00e-157	549.00
IUUC-Nle-069127	Nomascus leucogenys	56.69	2.00e-180	625.00
IUUC-Ont-072086	Oreochromis niloticus	66.45	2.00e-107	382.00
IUUC-Oba-075878	Oryza barthii	45.71	3.00e-15	75.90
IUUC-Obr-076120	Oryza brachyantha	45.71	2.00e-15	76.60
IUUC-Ogl-077906	Oryza glaberrima	45.71	3.00e-15	75.90
IUUC-Ogu-078031	Oryza glumaepatula	45.71	3.00e-15	75.50
IUUC-Oin-079270	Oryza indica	45.71	3.00e-15	75.50
IUUC-Olo-080996	Oryza longistaminata	45.71	3.00e-15	75.90
IUUC-Ome-081784	Oryza meridionalis	45.71	4.00e-15	75.50
IUUC-Oni-082697	Oryza nivara	45.71	3.00e-15	75.90
IUUC-Opu-083782	Oryza punctata	45.71	2.00e-15	76.30
IUUC-Oru-084352	Oryza rufipogon	45.71	3.00e-15	75.90
IUUC-Osa-085627	Oryza sativa	45.71	3.00e-15	75.90
IUUC-Ola-087452	Oryzias latipes	70.00	2.00e-104	373.00
IUUC-Olu-087781	Ostreococcus lucimarinus	39.73	3.00e-13	67.00
IUUC-Oga-088750	Otolemur garnettii	57.14	1.00e-170	592.00
IUUC-Oar-089523	Ovis aries	53.11	2.00e-103	369.00
IUUC-Ptr-091533	Pan troglodytes	57.70	0.00e+00	632.00
IUUC-Pan-092675	Papio anubis	56.94	1.00e-169	589.00
IUUC-Psi-093735	Pelodiscus sinensis	67.30	0.00e+00	776.00
IUUC-Ppa-095806	Physcomitrella patens	42.05	3.00e-16	79.70
IUUC-Pfo-096637	Poecilia formosa	69.97	3.00e-108	385.00
IUUC-Pab-098486	Pongo abelii	57.08	0.00e+00	632.00
IUUC-Pop-098950	Populus trichocarpa	46.05	1.00e-15	76.60
IUUC-Pca-100143	Procavia capensis	58.00	3.00e-101	362.00
IUUC-Pva-103151	Pteropus vampyrus	54.97	3.00e-162	564.00
IUUC-Pgr-103322	Puccinia graminis	30.34	5.00e-10	58.20
IUUC-Ptt-103976	Puccinia triticina	31.53	7.00e-12	63.50
IUUC-Rno-105745	Rattus norvegicus	54.12	6.00e-147	514.00
IUUC-Sha-106681	Sarcophilus harrisii	66.67	1.00e-122	433.00
IUUC-Smo-109572	Selaginella moellendorffii	49.35	3.00e-16	77.80
IUUC-Sit-110112	Setaria italica	41.10	7.00e-14	71.20
IUUC-Sar-113229	Sorex araneus	64.90	5.00e-97	348.00
IUUC-Sbi-114570	Sorghum bicolor	44.00	2.00e-16	79.70
IUUC-Ssc-115345	Sus scrofa	71.54	6.00e-49	188.00
IUUC-Tru-118302	Takifugu rubripes	66.99	3.00e-107	382.00
IUUC-Tsy-119338	Tarsius syrichta	46.77	2.00e-132	465.00
IUUC-Tni-119675	Tetraodon nigroviridis	63.39	8.00e-93	333.00
IUUC-Tca-121848	Theobroma cacao	48.05	3.00e-16	79.00
IUUC-Tae-124902	Triticum aestivum	40.00	5.00e-16	78.60
IUUC-Tur-125977	Triticum urartu	54.55	6.00e-14	71.20
IUUC-Tbe-127505	Tupaia belangeri	57.21	1.00e-55	210.00
IUUC-Ttr-128367	Tursiops truncatus	54.60	2.00e-129	456.00
IUUC-Vpa-130480	Vicugna pacos	63.96	2.00e-99	356.00
IUUC-Vvi-130961	Vitis vinifera	48.57	7.00e-15	74.70
IUUC-Xma-133863	Xiphophorus maculatus	69.62	1.00e-107	383.00
IUUC-Yli-134649	Yarrowia lipolytica	41.38	4.00e-11	62.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence