iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028300

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

LON peptidase N-terminal domain and ring finger 1

Genbank Nucleotide ID

FP016207

Gene Name

lonrf1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000075048.5	ENSDART00000135556.3	ENSDARP00000113687.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.60e-16	59.6	302	349
E3 activity/RING/RING	3.30e-11	44.5	306	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f Cp+   l+ +Pv++p+G+t+ +++Ie+ l+++ + cP+++qpl+e
   Q: 302  SDFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLR-CPLCKQPLQE 349
           78******************************999999.********75 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C   f + p+++pCgH+f+++C+++          + rCPlC+
   Q: 306  CPLCIRLFYE-PVTTPCGHTFCKNCIERS------LDHNLRCPLCK 344
           ****999977.***************888......9*********7 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MKEWVMDLLE CPICLFLMCE PMTMSCGHSF CRRCMGAFLP SRCPTCKERL KQRDAKNIKN 60
NVLLFSIIEK CCPEETKMKC HIQEKLKTSE FTEALRIADE GIEMAPDDVS LKVWRAEACM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTATGTAA TGTAATGTAA TGGTGTCAGG AGCGAAGCGA GCATAATCTG CGTGCTAAAC 60
AGAAGAGAAA GATGACGGTC TCGCGAACTT TAAAACAGGT AAACAGAGAC CCGTCGCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0802--TPR repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

dre:560773

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010916	Astyanax mexicanus	77.60	0.00e+00	947.00
IUUC-Fox-037926	Fusarium oxysporum	31.43	5.00e-08	51.60
IUUC-Gmo-038475	Gadus morhua	69.83	6.00e-138	483.00
IUUC-Gga-040973	Gallus gallus	65.84	5.00e-93	335.00
IUUC-Gac-041944	Gasterosteus aculeatus	81.10	5.00e-164	570.00
IUUC-Loc-052858	Lepisosteus oculatus	68.70	0.00e+00	816.00
IUUC-Mtr-058075	Medicago truncatula	37.79	1.00e-43	171.00
IUUC-Ont-072148	Oreochromis niloticus	65.92	0.00e+00	811.00
IUUC-Ola-087198	Oryzias latipes	85.86	2.00e-155	541.00
IUUC-Olu-087810	Ostreococcus lucimarinus	24.23	2.00e-06	47.80
IUUC-Ppa-095542	Physcomitrella patens	29.52	1.00e-09	58.20
IUUC-Pfo-096795	Poecilia formosa	74.16	0.00e+00	893.00
IUUC-Pop-100044	Populus trichocarpa	36.54	1.00e-43	170.00
IUUC-Tru-118286	Takifugu rubripes	77.33	4.00e-154	538.00
IUUC-Tni-120476	Tetraodon nigroviridis	85.28	1.00e-154	538.00
IUUC-Tae-125900	Triticum aestivum	35.62	2.00e-45	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence