iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014377

UUCD1 version

UUC-BrD-00878

Ensembl Protein ID

BRADI2G50940.1

UniProt Accession

I1HRZ5; I1HRZ5_BRADI

Genbank Protein ID

KQK09919.1; KQK09920.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000881; CM000881

Gene Name

LOC100835412; BRADI_2g50940

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G50940	BRADI2G50940.1	BRADI2G50940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.40e-06	26.3	21	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
           f C I lel +dPvv+ +G+ +   ++ +wl    +  +cPv ++ ++ee+lvP 
   Q: 21   FECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHfpECPVWKAGVQEEKLVPL 75
           99*****************************77777789**************96 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MANRVDESSA SVNGGMDSGS FECNICLELA QDPVVTLCGH LFCWPCLYEW LHVHAHFPEC 60
PVWKAGVQEE KLVPLYGRCK ASTGSRSRSV AGVQIPGRPT GQRHSTAPQP DHRHDHYPNQ 120

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Nucleotide Sequence
(Fasta)

CCGTCAGGTT GTCAGGTTCC GCACTTCCAC TCCATCTCAC GGGTTCTCCC CACCCGAGGC 60
CGCATCAAGC AAGTTGCCGC CGTCCCGTCT TGGCCCTCCT CGCCCTCGTT CCCTAGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001042	Aegilops tauschii	69.91	2.00e-52	198.00
IUUC-Ame-011316	Astyanax mexicanus	51.76	7.00e-23	99.40
IUUC-Csv-026245	Ciona savignyi	44.23	2.00e-08	52.00
IUUC-Eeu-034614	Erinaceus europaeus	45.71	3.00e-14	70.50
IUUC-Gmo-039369	Gadus morhua	55.56	9.00e-21	92.00
IUUC-Gac-041719	Gasterosteus aculeatus	53.33	3.00e-21	93.60
IUUC-Hvu-047487	Hordeum vulgare	76.10	4.00e-57	213.00
IUUC-Lpe-051034	Leersia perrieri	80.14	6.00e-62	229.00
IUUC-Loc-052118	Lepisosteus oculatus	52.70	3.00e-20	90.50
IUUC-Opr-070197	Ochotona princeps	54.29	7.00e-20	89.40
IUUC-Ont-072482	Oreochromis niloticus	53.57	1.00e-23	101.00
IUUC-Ogl-077553	Oryza glaberrima	72.77	4.00e-62	229.00
IUUC-Ogu-078463	Oryza glumaepatula	79.01	2.00e-57	214.00
IUUC-Oin-080177	Oryza indica	79.63	3.00e-58	217.00
IUUC-Ome-081605	Oryza meridionalis	78.40	9.00e-54	202.00
IUUC-Oni-082458	Oryza nivara	79.63	1.00e-58	219.00
IUUC-Oru-084757	Oryza rufipogon	79.01	1.00e-57	214.00
IUUC-Osa-086198	Oryza sativa	79.01	2.00e-57	214.00
IUUC-Ola-086507	Oryzias latipes	51.72	2.00e-24	104.00
IUUC-Oga-088197	Otolemur garnettii	55.13	3.00e-21	94.00
IUUC-Pfo-096818	Poecilia formosa	47.00	1.00e-23	102.00
IUUC-Sit-110376	Setaria italica	69.13	3.00e-67	247.00
IUUC-Tni-120909	Tetraodon nigroviridis	51.95	2.00e-21	94.70
IUUC-Tae-123038	Triticum aestivum	68.44	3.00e-53	200.00
IUUC-Tur-126676	Triticum urartu	72.55	6.00e-50	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence