iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098920

Ensembl Protein ID

POPTR_0007s02540.1

UniProt Accession

B9HHE8; B9HHE8_POPTR

Genbank Protein ID

EEE90279.1

Protein Name

Ubiquitin family protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_763889; POPTR_0007s02540g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s02540	POPTR_0007s02540.1	POPTR_0007s02540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.30e-09	37.6	1	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGki..L....eddktLadyglkdgstihl 69
           + v+v+ l+g+ + ++v  ++tVa+LK++ie ++++p ++  L +++k   L     d+  L d+g++dgs+i+l
   Q: 1    MRVVVEILTGTLFYIQVGNDATVADLKKEIEAQQKLPQDRLILFLSNKRshLineeGDGAALVDCGVQDGSHIYL 75
           6799***********************************999999977655235559999*************98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRVVVEILTG TLFYIQVGND ATVADLKKEI EAQQKLPQDR LILFLSNKRS HLINEEGDGA 60
ALVDCGVQDG SHIYLFFDPV DNHDESTDHL VFTWPHSFLE QA 102

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGGTGG TGGTGGAGAT TTTGACAGGA ACCCTTTTCT ACATTCAAGT GGGCAATGAT 60
GCCACGGTTG CAGATCTTAA GAAAGAGATT GAGGCACAGC AGAAACTACC TCAAGATCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

KEGG

pop:POPTR_0007s02540g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gmo-039292	Gadus morhua	30.67	5.00e-04	38.10
IUUC-Gac-042379	Gasterosteus aculeatus	30.67	1.00e-03	37.00
IUUC-Gma-043175	Glycine max	66.32	8.00e-31	124.00
IUUC-Loc-051781	Lepisosteus oculatus	33.33	2.00e-04	39.70
IUUC-Mtr-057978	Medicago truncatula	58.59	2.00e-28	115.00
IUUC-Mac-065611	Musa acuminata	51.22	8.00e-16	78.60
IUUC-Ont-071842	Oreochromis niloticus	30.67	3.00e-03	36.20
IUUC-Pfo-096547	Poecilia formosa	30.67	1.00e-03	37.70
IUUC-Ppe-101892	Prunus persica	59.62	3.00e-29	119.00
IUUC-Tru-118322	Takifugu rubripes	30.67	1.00e-03	37.70
IUUC-Tni-120877	Tetraodon nigroviridis	32.00	4.00e-04	38.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence