iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gac-042201

UUCD1 version

UUC-GaA-00992

Ensembl Protein ID

ENSGACP00000024768.1

UniProt Accession

G3Q4G4; G3Q4G4_GASAC

Protein Name

Uncharacterized protein

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGACG00000018731.1	ENSGACT00000024817.1	ENSGACP00000024768.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.10e-08	33.5	377	415
E3 activity/RING/U-box	6.00e-11	42.7	372	421

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f + p+++pCgH+f++ Cl++          + +CPlC+
   Q: 377  CSLCMRLFYE-PVTTPCGHTFCLRCLERC------LDHNPKCPLCK 415
           ****999977.***************999......9*********7 PP

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           p ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++++l+e 
   Q: 372  PTDLDCSLCMRLFYEPVTTPCGHTFCLRCLERCLDHNPK-CPLCKEELSEY 421
           67899*********************************9.********653 PP

Organism

Gasterosteus aculeatus

Protein Sequence
(Fasta)

QPAGPGDPER RRELTGKRAD ALAFGGKVTD AFEMYRRASE IERLNPVLLT NIIEYLSAGI 60
GRQNGGDGRN GTPRKGCEAA GSGYEDFSCR MCLSFLFEPV TLPCGHCFCK KCLERERKET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACCGGCGG GTCCCGGAGA TCCAGAGAGG CGGCGGGAGC TGACGGGCAA GCGGGCTGAT 60
GCGCTCGCCT TCGGGGGCAA AGTCACCGAT GCTTTCGAGA TGTACCGACG AGCCTCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13181--TPR_8

SMART

SM00464--LON
SM00184--RING
SM00028--TPR
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001774	Ailuropoda melanoleuca	69.00	2.00e-128	452.00
IUUC-Apl-003916	Anas platyrhynchos	71.07	7.00e-141	493.00
IUUC-Aca-004822	Anolis carolinensis	48.51	2.00e-166	579.00
IUUC-Aly-005476	Arabidopsis lyrata	37.34	2.00e-37	150.00
IUUC-Ame-010881	Astyanax mexicanus	55.51	0.00e+00	699.00
IUUC-Bta-012872	Bos taurus	50.71	3.00e-177	615.00
IUUC-Cel-018356	Caenorhabditis elegans	32.53	8.00e-11	59.70
IUUC-Cja-018747	Callithrix jacchus	47.13	1.00e-150	526.00
IUUC-Cfa-020101	Canis familiaris	49.06	6.00e-173	600.00
IUUC-Cpo-022041	Cavia porcellus	46.85	2.00e-159	556.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	31.69	1.00e-09	57.00
IUUC-Csa-024034	Chlorocebus sabaeus	49.79	3.00e-174	605.00
IUUC-Cne-026875	Cryptococcus neoformans	29.07	1.00e-08	55.10
IUUC-Dno-029518	Dasypus novemcinctus	46.73	5.00e-147	514.00
IUUC-Dor-031132	Dipodomys ordii	49.41	6.00e-174	604.00
IUUC-Eca-033382	Equus caballus	49.86	9.00e-180	623.00
IUUC-Fca-035777	Felis catus	52.02	3.00e-131	461.00
IUUC-Fal-036730	Ficedula albicollis	55.51	2.00e-165	575.00
IUUC-Gmo-039110	Gadus morhua	64.38	0.00e+00	847.00
IUUC-Gga-041187	Gallus gallus	53.19	0.00e+00	712.00
IUUC-Ggo-045111	Gorilla gorilla	50.42	3.00e-175	608.00
IUUC-Hsa-045695	Homo sapiens	50.14	1.00e-174	606.00
IUUC-Loc-051823	Lepisosteus oculatus	56.86	0.00e+00	738.00
IUUC-Laf-053434	Loxodonta africana	56.90	2.00e-160	558.00
IUUC-Mcc-055249	Macaca mulatta	51.70	1.00e-127	449.00
IUUC-Mga-060131	Meleagris gallopavo	57.93	2.00e-164	572.00
IUUC-Mmr-060749	Microcebus murinus	50.72	4.00e-180	624.00
IUUC-Mdo-062261	Monodelphis domestica	47.45	1.00e-173	603.00
IUUC-Mmu-063219	Mus musculus	49.71	6.00e-169	587.00
IUUC-Mpu-066222	Mustela putorius furo	68.67	6.00e-125	441.00
IUUC-Mlu-067769	Myotis lucifugus	49.71	1.00e-173	603.00
IUUC-Nle-069738	Nomascus leucogenys	56.96	1.00e-163	569.00
IUUC-Ont-072029	Oreochromis niloticus	69.94	0.00e+00	878.00
IUUC-Oan-073179	Ornithorhynchus anatinus	71.88	2.00e-141	495.00
IUUC-Ocu-074884	Oryctolagus cuniculus	47.83	7.00e-165	574.00
IUUC-Ola-086698	Oryzias latipes	68.58	0.00e+00	902.00
IUUC-Oga-089109	Otolemur garnettii	48.88	3.00e-177	615.00
IUUC-Oar-089903	Ovis aries	50.92	1.00e-178	620.00
IUUC-Ptr-091238	Pan troglodytes	50.00	1.00e-172	600.00
IUUC-Pan-092379	Papio anubis	47.42	2.00e-168	586.00
IUUC-Psi-093418	Pelodiscus sinensis	56.63	0.00e+00	641.00
IUUC-Pfo-097284	Poecilia formosa	70.89	0.00e+00	941.00
IUUC-Pab-098343	Pongo abelii	47.24	2.00e-170	592.00
IUUC-Pca-100905	Procavia capensis	49.41	7.00e-144	504.00
IUUC-Pva-102242	Pteropus vampyrus	46.72	3.00e-152	532.00
IUUC-Rno-105899	Rattus norvegicus	46.71	2.00e-172	599.00
IUUC-Sha-107565	Sarcophilus harrisii	46.86	3.00e-163	568.00
IUUC-Ssc-115705	Sus scrofa	49.15	8.00e-177	613.00
IUUC-Tgu-116978	Taeniopygia guttata	58.36	0.00e+00	693.00
IUUC-Tsy-118988	Tarsius syrichta	56.15	5.00e-158	550.00
IUUC-Vpa-130779	Vicugna pacos	68.29	7.00e-117	414.00
IUUC-Xtr-132508	Xenopus tropicalis	51.70	0.00e+00	674.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence