iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oan-072715

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPN01326384

Gene Name

TRIM55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOANG00000002304.3	ENSOANT00000003649.2	ENSOANP00000003648.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.20e-09	35.9	10	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +            g    s ++frCP Cr
   Q: 10   CPICLEMFTKPVVILPCQHNLCRKCASDIfqasnpylptrGGTTVASGGRFRCPSCR 66
           *************************744445557779999888889**********8 PP

Organism

Ornithorhynchus anatinus

Protein Sequence
(Fasta)

MDNLEKQLIC PICLEMFTKP VVILPCQHNL CRKCASDIFQ ASNPYLPTRG GTTVASGGRF 60
RCPSCRHEVV LDRHGVYGLQ RNLLVENIID IYKQESTRPE RKSDQPMCEE HEEERINIYC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATGATTAA TCTTCATCAG TAAGTAGGGC TGCTCCTGAC ATAATGCTGG CCTTCCCAAG 60
AATTGGAAAC TGGAGTGAAA CTGATTGCAC CATTATGCAA TTTAGCATTT AATCTTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	73.46	0.00e+00	706.00
IUUC-Apl-003341	Anas platyrhynchos	72.27	0.00e+00	637.00
IUUC-Aca-005384	Anolis carolinensis	71.74	4.00e-167	580.00
IUUC-Ame-010720	Astyanax mexicanus	73.42	3.00e-142	497.00
IUUC-Bta-013040	Bos taurus	92.70	2.00e-180	625.00
IUUC-Cja-019932	Callithrix jacchus	94.23	0.00e+00	634.00
IUUC-Cfa-020450	Canis familiaris	72.78	0.00e+00	715.00
IUUC-Cpo-021767	Cavia porcellus	72.39	0.00e+00	729.00
IUUC-Csa-023600	Chlorocebus sabaeus	72.44	0.00e+00	710.00
IUUC-Cho-024753	Choloepus hoffmanni	89.10	2.00e-168	585.00
IUUC-Dre-028701	Danio rerio	72.47	6.00e-140	489.00
IUUC-Dno-030008	Dasypus novemcinctus	91.75	2.00e-179	621.00
IUUC-Ete-032274	Echinops telfairi	65.06	0.00e+00	640.00
IUUC-Eca-034326	Equus caballus	93.29	0.00e+00	630.00
IUUC-Fca-035385	Felis catus	70.70	0.00e+00	637.00
IUUC-Fal-036679	Ficedula albicollis	90.97	9.00e-170	589.00
IUUC-Gmo-039021	Gadus morhua	65.71	2.00e-121	427.00
IUUC-Gga-040576	Gallus gallus	91.30	3.00e-168	583.00
IUUC-Gac-042165	Gasterosteus aculeatus	70.16	6.00e-136	476.00
IUUC-Ggo-044496	Gorilla gorilla	93.89	0.00e+00	629.00
IUUC-Hsa-046337	Homo sapiens	93.91	0.00e+00	633.00
IUUC-Lch-050504	Latimeria chalumnae	68.04	8.00e-176	609.00
IUUC-Loc-052717	Lepisosteus oculatus	57.71	2.00e-158	551.00
IUUC-Laf-053838	Loxodonta africana	70.69	0.00e+00	709.00
IUUC-Mcc-054690	Macaca mulatta	92.63	1.00e-180	625.00
IUUC-Meu-056782	Macropus eugenii	69.89	3.00e-169	587.00
IUUC-Mga-060112	Meleagris gallopavo	90.70	6.00e-167	580.00
IUUC-Mmr-061229	Microcebus murinus	71.54	0.00e+00	705.00
IUUC-Mdo-062397	Monodelphis domestica	74.29	0.00e+00	703.00
IUUC-Mmu-063764	Mus musculus	70.47	0.00e+00	686.00
IUUC-Mpu-066503	Mustela putorius furo	74.95	0.00e+00	725.00
IUUC-Nle-069170	Nomascus leucogenys	93.59	0.00e+00	631.00
IUUC-Ont-072082	Oreochromis niloticus	69.97	5.00e-135	473.00
IUUC-Ocu-074747	Oryctolagus cuniculus	93.91	0.00e+00	634.00
IUUC-Ola-086646	Oryzias latipes	66.77	2.00e-129	454.00
IUUC-Oga-087995	Otolemur garnettii	92.65	4.00e-180	623.00
IUUC-Oar-089844	Ovis aries	92.70	0.00e+00	626.00
IUUC-Ptr-091556	Pan troglodytes	93.89	0.00e+00	630.00
IUUC-Pan-092224	Papio anubis	93.25	0.00e+00	627.00
IUUC-Psi-093856	Pelodiscus sinensis	71.73	0.00e+00	698.00
IUUC-Pma-094534	Petromyzon marinus	55.95	2.00e-99	355.00
IUUC-Pfo-096596	Poecilia formosa	64.55	3.00e-131	461.00
IUUC-Pca-100510	Procavia capensis	70.78	0.00e+00	693.00
IUUC-Pva-102962	Pteropus vampyrus	92.65	3.00e-167	580.00
IUUC-Rno-105696	Rattus norvegicus	70.39	0.00e+00	674.00
IUUC-Sha-106825	Sarcophilus harrisii	75.76	0.00e+00	685.00
IUUC-Ssc-116332	Sus scrofa	72.76	0.00e+00	692.00
IUUC-Tgu-117208	Taeniopygia guttata	91.30	1.00e-170	592.00
IUUC-Tru-118744	Takifugu rubripes	70.06	5.00e-134	469.00
IUUC-Tsy-119352	Tarsius syrichta	71.38	0.00e+00	703.00
IUUC-Tni-120413	Tetraodon nigroviridis	68.75	5.00e-134	469.00
IUUC-Tbe-127821	Tupaia belangeri	96.22	7.00e-110	390.00
IUUC-Ttr-128545	Tursiops truncatus	71.11	0.00e+00	667.00
IUUC-Vpa-130699	Vicugna pacos	92.63	0.00e+00	627.00
IUUC-Xtr-132207	Xenopus tropicalis	66.53	2.00e-175	607.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence