iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049188

Ensembl Protein ID

CAY69374

UniProt Accession

C4R1K0; C4R1K0_KOMPG

Genbank Protein ID

CAY69374.1

Protein Name

Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis

Genbank Nucleotide ID

FN392320

Gene Name

PAS_chr2-1_0725

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr2-1_0725	CAY69374	CAY69374

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-08	32.7	296	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 15   llvsGsdDgtikvWDlrtgvll 36
            +++G+ D  ++v+Dl+t++ l
   Q: 296  VIATGGLDRYVRVYDLDTCRIL 317
           59**************999875 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MKLLVALEDT GSIKEVECLR GTDTSVQTAK QPISIVNHAA ESRATHILKF LVTSDSKYVV 60
AARKGGAIVI YERDTFEEVK RYTNMTANES SAFVSLIQDS TSLIYACCEN GVVSVIDLEN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATTGT TGGTTGCCTT AGAGGACACA GGCTCAATAA AAGAGGTTGA ATGTTTACGA 60
GGCACAGATA CATCAGTTCA AACCGCAAAA CAACCCATAA GTATCGTCAA TCATGCCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

KEGG

ppa:PAS_chr2-1_0725

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000787	Aegilops tauschii	22.33	2.00e-11	61.60
IUUC-Aml-001460	Ailuropoda melanoleuca	30.80	4.00e-20	90.10
IUUC-Atr-002657	Amborella trichopoda	25.20	3.00e-19	87.40
IUUC-Aly-006380	Arabidopsis lyrata	26.26	5.00e-18	83.20
IUUC-Ath-007686	Arabidopsis thaliana	26.26	1.00e-17	82.00
IUUC-Ame-011942	Astyanax mexicanus	29.15	4.00e-18	83.20
IUUC-Bta-013382	Bos taurus	31.15	6.00e-20	89.40
IUUC-Bdi-014280	Brachypodium distachyon	25.23	2.00e-14	71.20
IUUC-Bra-017855	Brassica rapa	27.37	5.00e-19	86.70
IUUC-Cja-018933	Callithrix jacchus	28.51	2.00e-18	84.70
IUUC-Cfa-020634	Canis familiaris	31.56	1.00e-19	88.60
IUUC-Cpo-022089	Cavia porcellus	28.69	2.00e-18	84.30
IUUC-Csa-023835	Chlorocebus sabaeus	29.10	4.00e-19	86.70
IUUC-Cho-024385	Choloepus hoffmanni	34.82	3.00e-06	43.10
IUUC-Cin-025691	Ciona intestinalis	27.59	2.00e-10	57.40
IUUC-Dre-028473	Danio rerio	29.89	1.00e-16	79.00
IUUC-Dno-029687	Dasypus novemcinctus	28.79	6.00e-17	79.30
IUUC-Dor-030529	Dipodomys ordii	26.64	1.00e-10	58.20
IUUC-Dme-031982	Drosophila melanogaster	27.46	2.00e-21	94.40
IUUC-Eca-033792	Equus caballus	27.94	2.00e-11	61.20
IUUC-Fca-036584	Felis catus	30.22	8.00e-20	89.00
IUUC-Gmo-039064	Gadus morhua	26.70	2.00e-13	67.40
IUUC-Gac-042170	Gasterosteus aculeatus	25.08	7.00e-16	75.90
IUUC-Gma-044150	Glycine max	26.42	4.00e-15	73.60
IUUC-Ggo-044955	Gorilla gorilla	29.92	2.00e-20	90.90
IUUC-Hsa-046615	Homo sapiens	29.51	6.00e-20	89.40
IUUC-Hvu-047119	Hordeum vulgare	22.77	8.00e-13	65.90
IUUC-Itr-048987	Ictidomys tridecemlineatus	28.86	6.00e-19	86.30
IUUC-Lch-050396	Latimeria chalumnae	25.08	7.00e-19	85.90
IUUC-Laf-054015	Loxodonta africana	26.59	5.00e-19	86.30
IUUC-Mcc-055589	Macaca mulatta	29.10	4.00e-19	87.00
IUUC-Meu-056160	Macropus eugenii	30.07	2.00e-09	54.30
IUUC-Mtr-057719	Medicago truncatula	25.91	1.00e-17	82.00
IUUC-Mmr-060801	Microcebus murinus	29.51	3.00e-19	87.00
IUUC-Mdo-062069	Monodelphis domestica	30.61	6.00e-19	86.30
IUUC-Mmu-063487	Mus musculus	29.10	4.00e-17	80.10
IUUC-Mpu-066542	Mustela putorius furo	31.98	1.00e-19	88.60
IUUC-Mlu-067520	Myotis lucifugus	31.22	7.00e-18	82.40
IUUC-Nle-069422	Nomascus leucogenys	29.51	5.00e-20	89.70
IUUC-Opr-070402	Ochotona princeps	24.89	1.00e-09	54.70
IUUC-Ont-072078	Oreochromis niloticus	24.05	1.00e-14	72.00
IUUC-Ocu-073886	Oryctolagus cuniculus	26.87	2.00e-20	90.90
IUUC-Obr-076206	Oryza brachyantha	26.11	3.00e-16	78.20
IUUC-Ogl-077112	Oryza glaberrima	25.70	2.00e-15	74.70
IUUC-Ogu-078172	Oryza glumaepatula	24.34	4.00e-13	67.00
IUUC-Oin-080070	Oryza indica	25.70	2.00e-15	74.70
IUUC-Olo-080534	Oryza longistaminata	24.34	5.00e-13	67.40
IUUC-Ome-081869	Oryza meridionalis	24.34	2.00e-13	68.20
IUUC-Opu-083828	Oryza punctata	24.40	5.00e-13	66.60
IUUC-Oru-084690	Oryza rufipogon	24.34	3.00e-13	67.80
IUUC-Ola-087342	Oryzias latipes	28.68	1.00e-19	88.60
IUUC-Oga-088865	Otolemur garnettii	29.51	9.00e-18	82.40
IUUC-Oar-090030	Ovis aries	30.74	2.00e-19	87.80
IUUC-Pan-092461	Papio anubis	29.10	4.00e-19	87.00
IUUC-Psi-093061	Pelodiscus sinensis	27.16	5.00e-16	76.60
IUUC-Pma-094281	Petromyzon marinus	26.63	5.00e-15	73.20
IUUC-Ppa-095623	Physcomitrella patens	28.70	1.00e-19	88.60
IUUC-Pfo-097074	Poecilia formosa	28.14	1.00e-15	75.10
IUUC-Pab-098290	Pongo abelii	29.51	6.00e-20	89.40
IUUC-Pop-099317	Populus trichocarpa	27.22	2.00e-17	81.30
IUUC-Pca-100383	Procavia capensis	26.89	9.00e-19	85.50
IUUC-Ppe-101867	Prunus persica	23.76	2.00e-14	71.60
IUUC-Pva-103218	Pteropus vampyrus	34.13	1.00e-07	48.10
IUUC-Rno-105494	Rattus norvegicus	28.30	3.00e-18	83.60
IUUC-Sha-107127	Sarcophilus harrisii	27.98	7.00e-18	82.80
IUUC-Sit-110466	Setaria italica	24.62	4.00e-15	74.30
IUUC-Sbi-113854	Sorghum bicolor	25.63	6.00e-16	76.60
IUUC-Ssc-116144	Sus scrofa	31.58	6.00e-20	89.70
IUUC-Tru-118516	Takifugu rubripes	24.35	6.00e-15	72.80
IUUC-Tni-120527	Tetraodon nigroviridis	22.73	1.00e-13	68.20
IUUC-Tae-123391	Triticum aestivum	23.11	5.00e-14	70.10
IUUC-Tur-126054	Triticum urartu	23.27	2.00e-13	68.60
IUUC-Tbe-127232	Tupaia belangeri	31.45	1.00e-07	48.10
IUUC-Ttr-128529	Tursiops truncatus	27.49	4.00e-18	83.60
IUUC-Vvi-131680	Vitis vinifera	27.37	3.00e-18	84.00
IUUC-Xtr-132802	Xenopus tropicalis	28.95	5.00e-06	43.10
IUUC-Xma-133396	Xiphophorus maculatus	23.78	1.00e-08	52.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence