iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065635

Ensembl Protein ID

GSMUA_Achr6P05250_001

UniProt Accession

M0T4C3; M0T4C3_MUSAM

Protein Name

Eukaryotic translation initiation factor 3 subunit F; eIF-3-epsilon

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr6G05250_001	GSMUA_Achr6T05250_001	GSMUA_Achr6P05250_001

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	41.09	6.00e-51	198.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Musa acuminata

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAVLQFFPPS SPVVSARLHP VVLFSICDCY VRRPDQADRV IGTLLGTVSG GVVEIKNSYA 60
VPHNESADQV ALDVEYHRNM YMSHLKVNPK EVLVGWYSTG FGVSGGSALI HDFYVKELKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGTGC TGCAGTTCTT CCCGCCGTCG TCTCCGGTCG TGTCGGCGAG GTTGCACCCG 60
GTCGTCCTCT TCAGCATCTG CGACTGCTAC GTCCGGCGCC CCGACCAGGC CGACCGCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

mus:103987015

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	62.95	6.00e-99	353.00
IUUC-Aml-001527	Ailuropoda melanoleuca	41.09	1.00e-58	219.00
IUUC-Atr-002686	Amborella trichopoda	69.18	4.00e-104	370.00
IUUC-Apl-003977	Anas platyrhynchos	36.91	8.00e-44	169.00
IUUC-Aca-004335	Anolis carolinensis	40.07	2.00e-59	222.00
IUUC-Aly-005945	Arabidopsis lyrata	62.88	9.00e-103	365.00
IUUC-Ath-007045	Arabidopsis thaliana	61.87	8.00e-101	359.00
IUUC-Acl-008365	Aspergillus clavatus	36.73	3.00e-46	178.00
IUUC-Afl-008742	Aspergillus flavus	35.71	3.00e-45	174.00
IUUC-Afu-009030	Aspergillus fumigatus	36.73	9.00e-46	176.00
IUUC-Ani-009212	Aspergillus nidulans	36.00	3.00e-45	175.00
IUUC-Ang-009712	Aspergillus niger	36.73	4.00e-46	177.00
IUUC-Aor-009885	Aspergillus oryzae	35.71	4.00e-46	177.00
IUUC-Ate-010315	Aspergillus terreus	35.37	3.00e-44	171.00
IUUC-Ame-010801	Astyanax mexicanus	57.65	3.00e-24	104.00
IUUC-Bgr-011982	Blumeria graminis	34.55	5.00e-46	177.00
IUUC-Bta-012804	Bos taurus	41.09	1.00e-58	219.00
IUUC-Bci-013891	Botrytis cinerea	33.45	3.00e-37	148.00
IUUC-Bdi-014328	Brachypodium distachyon	67.13	3.00e-104	370.00
IUUC-Bol-015446	Brassica oleracea	64.55	2.00e-108	384.00
IUUC-Bra-016862	Brassica rapa	65.22	1.00e-107	382.00
IUUC-Cel-018171	Caenorhabditis elegans	27.95	4.00e-28	117.00
IUUC-Cja-019335	Callithrix jacchus	41.09	2.00e-58	219.00
IUUC-Cfa-020138	Canis familiaris	40.73	4.00e-58	217.00
IUUC-Cpo-022109	Cavia porcellus	37.59	3.00e-48	185.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	45.21	2.00e-66	245.00
IUUC-Csa-023994	Chlorocebus sabaeus	41.09	2.00e-58	219.00
IUUC-Cho-024351	Choloepus hoffmanni	31.45	3.00e-33	134.00
IUUC-Cin-025801	Ciona intestinalis	39.49	6.00e-54	203.00
IUUC-Csv-025805	Ciona savignyi	39.86	4.00e-54	204.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	31.12	4.00e-36	144.00
IUUC-Cne-026868	Cryptococcus neoformans	30.85	2.00e-26	112.00
IUUC-Cme-027328	Cyanidioschyzon merolae	25.63	3.00e-19	88.60
IUUC-Dre-028085	Danio rerio	39.64	5.00e-57	213.00
IUUC-Dno-030099	Dasypus novemcinctus	41.09	2.00e-58	218.00
IUUC-Dor-030324	Dipodomys ordii	36.36	3.00e-47	181.00
IUUC-Dse-031314	Dothistroma septosporum	35.40	9.00e-47	179.00
IUUC-Dme-031926	Drosophila melanogaster	38.65	1.00e-52	199.00
IUUC-Ete-032569	Echinops telfairi	39.78	8.00e-54	202.00
IUUC-Eca-033502	Equus caballus	38.91	3.00e-52	198.00
IUUC-Eeu-034883	Erinaceus europaeus	30.77	1.00e-21	95.50
IUUC-Fca-035873	Felis catus	41.09	1.00e-58	219.00
IUUC-Fal-036921	Ficedula albicollis	41.09	7.00e-59	219.00
IUUC-Fox-037765	Fusarium oxysporum	31.14	2.00e-30	125.00
IUUC-Fso-038240	Fusarium solani	31.49	2.00e-31	129.00
IUUC-Gmo-038864	Gadus morhua	40.50	1.00e-59	222.00
IUUC-Ggr-039862	Gaeumannomyces graminis	30.58	3.00e-32	131.00
IUUC-Gga-040952	Gallus gallus	41.09	9.00e-59	219.00
IUUC-Gac-041677	Gasterosteus aculeatus	41.90	1.00e-62	232.00
IUUC-Gma-043061	Glycine max	68.09	4.00e-100	357.00
IUUC-Ggo-045591	Gorilla gorilla	41.09	1.00e-58	219.00
IUUC-Hsa-046860	Homo sapiens	41.09	2.00e-58	219.00
IUUC-Hvu-047410	Hordeum vulgare	74.32	2.00e-65	239.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	41.45	4.00e-59	221.00
IUUC-Lch-049410	Latimeria chalumnae	40.00	4.00e-38	150.00
IUUC-Lpe-051102	Leersia perrieri	73.06	3.00e-106	377.00
IUUC-Loc-052016	Lepisosteus oculatus	37.86	3.00e-49	187.00
IUUC-Lma-053157	Leptosphaeria maculans	35.05	2.00e-45	175.00
IUUC-Laf-054568	Loxodonta africana	41.09	2.00e-58	218.00
IUUC-Mcc-054613	Macaca mulatta	41.09	1.00e-58	219.00
IUUC-Meu-056832	Macropus eugenii	29.46	6.00e-16	76.60
IUUC-Mor-057104	Magnaporthe oryzae	31.62	5.00e-34	137.00
IUUC-Mtr-058445	Medicago truncatula	68.10	2.00e-113	401.00
IUUC-Mla-059038	Melampsora laricipopulina	30.90	2.00e-37	148.00
IUUC-Mga-059548	Meleagris gallopavo	37.80	9.00e-48	182.00
IUUC-Mvi-060520	Microbotryum violaceum	25.32	5.00e-21	94.40
IUUC-Mdo-062376	Monodelphis domestica	40.00	1.00e-58	219.00
IUUC-Mmu-063254	Mus musculus	40.73	7.00e-58	216.00
IUUC-Mpu-066314	Mustela putorius furo	41.09	1.00e-58	219.00
IUUC-Mlu-067512	Myotis lucifugus	41.09	6.00e-59	220.00
IUUC-Nfi-068262	Neosartorya fischeri	36.73	7.00e-46	177.00
IUUC-Ncr-068872	Neurospora crassa	31.10	1.00e-35	143.00
IUUC-Nle-070118	Nomascus leucogenys	41.09	2.00e-58	219.00
IUUC-Opr-071228	Ochotona princeps	37.55	3.00e-47	181.00
IUUC-Ont-072600	Oreochromis niloticus	40.36	2.00e-61	228.00
IUUC-Oan-073584	Ornithorhynchus anatinus	36.99	6.00e-48	183.00
IUUC-Ocu-074542	Oryctolagus cuniculus	41.09	4.00e-59	221.00
IUUC-Oba-075923	Oryza barthii	71.68	3.00e-110	390.00
IUUC-Obr-076313	Oryza brachyantha	72.69	8.00e-106	375.00
IUUC-Ogl-076932	Oryza glaberrima	71.68	3.00e-110	390.00
IUUC-Ogu-078152	Oryza glumaepatula	71.68	3.00e-110	390.00
IUUC-Oin-079528	Oryza indica	71.68	3.00e-110	390.00
IUUC-Olo-080401	Oryza longistaminata	71.68	3.00e-110	390.00
IUUC-Ome-081553	Oryza meridionalis	71.33	7.00e-110	389.00
IUUC-Oni-082090	Oryza nivara	71.68	3.00e-110	390.00
IUUC-Opu-083583	Oryza punctata	73.06	4.00e-106	376.00
IUUC-Oru-084492	Oryza rufipogon	71.68	3.00e-110	390.00
IUUC-Osa-085383	Oryza sativa	71.68	3.00e-110	390.00
IUUC-Ola-086835	Oryzias latipes	40.62	2.00e-61	228.00
IUUC-Olu-087716	Ostreococcus lucimarinus	35.61	2.00e-41	161.00
IUUC-Oga-088886	Otolemur garnettii	40.73	1.00e-58	219.00
IUUC-Oar-090079	Ovis aries	41.09	9.00e-59	219.00
IUUC-Ptr-091457	Pan troglodytes	41.09	2.00e-58	219.00
IUUC-Pan-092317	Papio anubis	33.85	4.00e-29	120.00
IUUC-Psi-093129	Pelodiscus sinensis	37.83	8.00e-51	193.00
IUUC-Pma-094488	Petromyzon marinus	41.43	8.00e-62	229.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.05	1.00e-46	179.00
IUUC-Ppa-095341	Physcomitrella patens	57.64	6.00e-99	352.00
IUUC-Pfo-096286	Poecilia formosa	39.46	7.00e-61	226.00
IUUC-Pab-097765	Pongo abelii	41.09	2.00e-58	219.00
IUUC-Pop-099131	Populus trichocarpa	69.62	1.00e-115	408.00
IUUC-Pca-100524	Procavia capensis	30.96	3.00e-29	120.00
IUUC-Ppe-101934	Prunus persica	72.70	4.00e-121	426.00
IUUC-Pva-102577	Pteropus vampyrus	41.45	3.00e-59	221.00
IUUC-Pgr-103521	Puccinia graminis	30.37	4.00e-35	141.00
IUUC-Pte-104304	Pyrenophora teres	35.74	3.00e-47	181.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.74	6.00e-47	180.00
IUUC-Rno-105717	Rattus norvegicus	41.09	2.00e-58	218.00
IUUC-Sha-107190	Sarcophilus harrisii	39.11	2.00e-55	208.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	36.33	8.00e-44	169.00
IUUC-Spo-108355	Schizosaccharomyces pombe	38.79	9.00e-46	176.00
IUUC-Smo-109374	Selaginella moellendorffii	62.37	1.00e-105	375.00
IUUC-Sit-110119	Setaria italica	73.38	1.00e-108	385.00
IUUC-Sly-111570	Solanum lycopersicum	67.58	3.00e-100	357.00
IUUC-Stu-112308	Solanum tuberosum	67.58	3.00e-108	384.00
IUUC-Sar-113515	Sorex araneus	35.19	2.00e-13	68.20
IUUC-Sbi-114605	Sorghum bicolor	71.58	4.00e-107	380.00
IUUC-Sre-114906	Sporisorium reilianum	37.68	7.00e-47	180.00
IUUC-Tgu-117087	Taeniopygia guttata	37.40	1.00e-46	179.00
IUUC-Tru-117700	Takifugu rubripes	40.71	2.00e-62	231.00
IUUC-Tni-120470	Tetraodon nigroviridis	40.00	3.00e-60	224.00
IUUC-Tca-121109	Theobroma cacao	71.58	2.00e-107	380.00
IUUC-Tre-122095	Trichoderma reesei	30.93	1.00e-30	126.00
IUUC-Tvi-122580	Trichoderma virens	30.58	7.00e-30	124.00
IUUC-Tae-125129	Triticum aestivum	68.82	2.00e-105	374.00
IUUC-Tur-126658	Triticum urartu	58.95	2.00e-94	337.00
IUUC-Tme-127043	Tuber melanosporum	36.21	3.00e-45	175.00
IUUC-Tbe-127927	Tupaia belangeri	41.09	1.00e-58	219.00
IUUC-Ttr-129231	Tursiops truncatus	41.09	1.00e-58	219.00
IUUC-Uma-129578	Ustilago maydis	36.97	2.00e-45	175.00
IUUC-Vda-129730	Verticillium dahliae	32.75	8.00e-37	147.00
IUUC-Vvi-130968	Vitis vinifera	71.92	3.00e-116	410.00
IUUC-Xtr-132203	Xenopus tropicalis	39.29	1.00e-55	209.00
IUUC-Xma-133972	Xiphophorus maculatus	39.29	7.00e-60	223.00
IUUC-Yli-134553	Yarrowia lipolytica	29.79	7.00e-29	120.00
IUUC-Zma-134941	Zea mays	71.22	8.00e-101	358.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence