iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Rno-105053

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing protein 44

Genbank Nucleotide ID

AABR07053122

Gene Name

Trim44

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000005191.7	ENSRNOT00000007018.7	ENSRNOP00000007018.7

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	miRNAMap
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	98.84	2.00e-94	343.00	IUUC-Hsa-046933

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MASGVGAACE ELPPDGTCDE CEPDEAPGAE EVCRDCGFCY CRRHADAHRQ KFLSHRLAAY 60
VHGAQAWTPP ASGDDALPED VEAKGEAEGE VESEVGEEES ESEVDSESEE ESETEEDSED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGGCGCCAG GCCCAGCGCT GACGGCTGGC CGGGCCCTCA GGCCTCAGCA GCTGCAGACG 60
CGGCGCAGCG GAGCGGGGCG GCTGGCAAGT CCCCGGGGAG GCGGGCCTGC GTGAGGAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000315--Znf_B-box
IPR001781--Znf_LIM
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50119--ZF_BBOX

Pfam

PF00643--zf-B_box

SMART

SM00336--BBOX

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding
GO:0010468--P:regulation of gene expression

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002135	Ailuropoda melanoleuca	95.40	3.00e-93	335.00
IUUC-Atr-002531	Amborella trichopoda	37.14	3.20e-02	31.20
IUUC-Aca-004299	Anolis carolinensis	52.47	2.00e-43	168.00
IUUC-Aor-010081	Aspergillus oryzae	29.03	8.30e-02	30.40
IUUC-Ame-011462	Astyanax mexicanus	34.72	1.00e-24	107.00
IUUC-Bta-012387	Bos taurus	97.59	1.00e-90	326.00
IUUC-Bol-016106	Brassica oleracea	27.14	1.10e-01	27.70
IUUC-Cja-019460	Callithrix jacchus	98.84	7.00e-96	343.00
IUUC-Cfa-020100	Canis familiaris	98.84	6.00e-96	343.00
IUUC-Cpo-021464	Cavia porcellus	97.86	2.00e-96	345.00
IUUC-Csa-024181	Chlorocebus sabaeus	98.27	5.00e-95	340.00
IUUC-Cho-024604	Choloepus hoffmanni	99.11	2.00e-58	219.00
IUUC-Dre-028806	Danio rerio	35.98	1.00e-26	113.00
IUUC-Dno-029318	Dasypus novemcinctus	98.20	5.00e-92	330.00
IUUC-Dor-030588	Dipodomys ordii	98.84	3.00e-96	345.00
IUUC-Ete-032249	Echinops telfairi	97.70	5.00e-46	177.00
IUUC-Eca-034032	Equus caballus	82.66	9.00e-78	282.00
IUUC-Eeu-035183	Erinaceus europaeus	95.95	1.00e-95	342.00
IUUC-Fca-035500	Felis catus	95.40	1.00e-92	333.00
IUUC-Gmo-038768	Gadus morhua	29.17	2.00e-12	65.10
IUUC-Gac-041906	Gasterosteus aculeatus	33.33	2.00e-23	102.00
IUUC-Ggo-044418	Gorilla gorilla	98.84	9.00e-96	343.00
IUUC-Hsa-046933	Homo sapiens	98.84	6.00e-96	343.00
IUUC-Itr-048650	Ictidomys tridecemlineatus	99.42	2.00e-96	345.00
IUUC-Lch-050015	Latimeria chalumnae	51.53	2.00e-46	179.00
IUUC-Loc-052380	Lepisosteus oculatus	33.33	1.00e-24	106.00
IUUC-Laf-053357	Loxodonta africana	97.75	4.00e-47	181.00
IUUC-Mcc-055177	Macaca mulatta	98.84	6.00e-96	343.00
IUUC-Meu-056827	Macropus eugenii	60.00	3.00e-22	99.40
IUUC-Mmr-061691	Microcebus murinus	99.42	2.00e-96	345.00
IUUC-Mdo-062692	Monodelphis domestica	55.09	2.00e-49	189.00
IUUC-Mmu-064220	Mus musculus	99.42	1.00e-96	346.00
IUUC-Mac-065055	Musa acuminata	26.55	6.00e-03	35.40
IUUC-Mpu-066428	Mustela putorius furo	98.27	8.00e-96	343.00
IUUC-Mlu-068019	Myotis lucifugus	96.86	1.00e-87	315.00
IUUC-Nle-069471	Nomascus leucogenys	98.84	6.00e-96	343.00
IUUC-Opr-070285	Ochotona princeps	98.85	3.00e-46	178.00
IUUC-Ont-071942	Oreochromis niloticus	32.88	2.00e-20	92.80
IUUC-Oan-073022	Ornithorhynchus anatinus	56.13	1.00e-49	189.00
IUUC-Ocu-074814	Oryctolagus cuniculus	98.84	2.00e-96	345.00
IUUC-Oga-088155	Otolemur garnettii	98.82	1.00e-93	336.00
IUUC-Oar-090128	Ovis aries	97.48	5.00e-87	314.00
IUUC-Ptr-091061	Pan troglodytes	98.84	6.00e-96	343.00
IUUC-Pan-091763	Papio anubis	98.84	6.00e-96	343.00
IUUC-Pfo-097020	Poecilia formosa	32.64	2.00e-17	83.20
IUUC-Pab-098411	Pongo abelii	98.84	6.00e-96	343.00
IUUC-Pca-100887	Procavia capensis	96.15	3.00e-81	295.00
IUUC-Ssc-115541	Sus scrofa	97.58	2.00e-89	322.00
IUUC-Tru-118513	Takifugu rubripes	33.33	1.00e-22	100.00
IUUC-Tsy-118871	Tarsius syrichta	73.49	2.00e-59	221.00
IUUC-Tni-120386	Tetraodon nigroviridis	31.25	5.00e-18	84.70
IUUC-Ttr-128801	Tursiops truncatus	97.70	8.00e-46	177.00
IUUC-Xtr-132484	Xenopus tropicalis	44.24	1.00e-40	159.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence