iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++ +   +++  l+CgH fh+ C+++w       + + +CPlC+
   Q: 227  CVICQQKLkdNEEVSKLGCGHDFHFGCIKNW------LMVTNKCPLCN 268
           ********65334999***************......**********7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDPNEDNSEI PDSPFSFMWL LFGDDWDLWD TYSPVDADDI SPDPTLDVNG DGPAIEPGSL 60
LRTISWETTF EQDSLQSWND EQSETTSVVE YTDVSSHGNT FTNEEETLER YWRNWLQSST 120

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Nucleotide Sequence
(Fasta)

CCAAAAGTAT GGATCCAAAC GAAGACAATT CTGAGATACC GGATAGTCCT TTTAGCTTCA 60
TGTGGCTACT ATTTGGAGAC GACTGGGATC TATGGGACAC TTACTCACCA GTTGATGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G67120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006416	Arabidopsis lyrata	70.79	6.00e-106	375.00
IUUC-Bol-015447	Brassica oleracea	33.33	1.00e-30	125.00
IUUC-Bra-018036	Brassica rapa	46.62	3.00e-26	110.00
IUUC-Gmo-039613	Gadus morhua	34.23	2.00e-15	75.50
IUUC-Gac-042544	Gasterosteus aculeatus	28.83	2.00e-15	75.50
IUUC-Loc-052046	Lepisosteus oculatus	33.93	1.00e-15	76.60
IUUC-Ont-072005	Oreochromis niloticus	34.55	9.00e-16	77.00
IUUC-Ola-087046	Oryzias latipes	34.23	1.00e-15	76.60
IUUC-Pfo-096103	Poecilia formosa	34.23	2.00e-15	75.90
IUUC-Tru-118133	Takifugu rubripes	35.14	6.00e-16	77.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence