iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein 3D Structure
PDB	MMDB
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UBL/ATG8	59.65	3.00e-34	140.00	IUUC-Hsa-046055

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Functional Description
(View)

Ubiquitin-like modifier involved in autophagy and essential for dauer development and life-span extension (PubMed:20523114). Plays a role in the distribution and clearance of germ cell specific P-granules from somatic cells (PubMed:19167332).

Protein Sequence
(Fasta)

MLATLQSYTQ TAMSGNRGGS YISGIVPSFK ERRPFHERQK DVEEIRSQQP NKVPVIIERF 60
DGERSLPLMD RCKFLVPEHI TVAELMSIVR RRLQLHPQQA FFLLVNERSM VSNSMSMSNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGAAAATC GGGTCTCAGC ACGAAAAAGT GAAGAAGCGT TTATGCTAGC CACGCTTCAA 60
AGTTACACAC AAACAGCGAT GAGCGGAAAT CGGGGAGGAT CTTACATTTC CGGAATCGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0072--Autophagy
KW-0181--Complete proteome
KW-0968--Cytoplasmic vesicle
KW-0449--Lipoprotein
KW-1185--Reference proteome

Interpro

IPR004241--Atg8-like
IPR029071--Ubiquitin-rel_dom

Pfam

PF02991--Atg8

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0005737--C:cytoplasm
GO:0031410--C:cytoplasmic vesicle
GO:0006914--P:autophagy
GO:0050830--P:defense response to Gram-positive bacterium

KEGG

cel:CELE_ZK593.6

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001444	Ailuropoda melanoleuca	59.43	2.00e-33	132.00
IUUC-Apl-003457	Anas platyrhynchos	61.32	6.00e-34	134.00
IUUC-Aca-004647	Anolis carolinensis	61.40	1.00e-36	143.00
IUUC-Ame-010918	Astyanax mexicanus	62.28	7.00e-37	144.00
IUUC-Bta-012939	Bos taurus	59.65	7.00e-36	140.00
IUUC-Cja-019405	Callithrix jacchus	58.26	3.00e-34	135.00
IUUC-Cfa-020676	Canis familiaris	59.65	1.00e-35	140.00
IUUC-Cpo-022407	Cavia porcellus	59.65	6.00e-36	140.00
IUUC-Csa-023226	Chlorocebus sabaeus	59.65	6.00e-36	140.00
IUUC-Cho-024909	Choloepus hoffmanni	51.89	1.00e-25	106.00
IUUC-Cin-025249	Ciona intestinalis	59.13	9.00e-36	140.00
IUUC-Csv-026146	Ciona savignyi	38.60	9.00e-23	97.40
IUUC-Dre-027607	Danio rerio	62.28	7.00e-37	144.00
IUUC-Dno-029031	Dasypus novemcinctus	59.65	6.00e-36	140.00
IUUC-Dor-030793	Dipodomys ordii	58.26	4.00e-34	135.00
IUUC-Ete-032915	Echinops telfairi	59.43	3.00e-33	132.00
IUUC-Eca-034195	Equus caballus	57.39	1.00e-33	133.00
IUUC-Eeu-034695	Erinaceus europaeus	59.43	3.00e-33	132.00
IUUC-Fca-035743	Felis catus	58.12	4.00e-34	135.00
IUUC-Fal-036789	Ficedula albicollis	61.32	1.00e-33	134.00
IUUC-Gmo-039473	Gadus morhua	61.40	9.00e-37	144.00
IUUC-Gga-040489	Gallus gallus	61.40	1.00e-36	143.00
IUUC-Gac-041849	Gasterosteus aculeatus	62.28	2.00e-37	146.00
IUUC-Ggo-044780	Gorilla gorilla	59.43	4.00e-33	131.00
IUUC-Hsa-046055	Homo sapiens	59.65	6.00e-36	140.00
IUUC-Itr-048837	Ictidomys tridecemlineatus	59.65	6.00e-36	140.00
IUUC-Lch-050578	Latimeria chalumnae	60.53	2.00e-35	139.00
IUUC-Loc-052008	Lepisosteus oculatus	59.50	5.00e-37	144.00
IUUC-Laf-054392	Loxodonta africana	57.89	1.00e-33	133.00
IUUC-Mcc-054698	Macaca mulatta	58.26	3.00e-34	135.00
IUUC-Meu-056702	Macropus eugenii	52.17	5.00e-29	118.00
IUUC-Mga-059593	Meleagris gallopavo	61.32	5.00e-34	134.00
IUUC-Mmr-061787	Microcebus murinus	59.65	6.00e-36	140.00
IUUC-Mdo-062276	Monodelphis domestica	60.53	6.00e-36	140.00
IUUC-Mmu-063357	Mus musculus	59.65	6.00e-36	140.00
IUUC-Mpu-065740	Mustela putorius furo	59.65	1.00e-35	140.00
IUUC-Mlu-067688	Myotis lucifugus	59.65	5.00e-36	141.00
IUUC-Nle-069962	Nomascus leucogenys	58.26	3.00e-34	135.00
IUUC-Opr-071159	Ochotona princeps	59.43	3.00e-33	132.00
IUUC-Ont-071272	Oreochromis niloticus	62.28	6.00e-37	144.00
IUUC-Oan-073060	Ornithorhynchus anatinus	57.69	4.00e-31	125.00
IUUC-Ocu-073918	Oryctolagus cuniculus	57.41	1.00e-30	123.00
IUUC-Ola-087353	Oryzias latipes	61.40	4.00e-36	141.00
IUUC-Oga-088213	Otolemur garnettii	59.65	6.00e-36	140.00
IUUC-Oar-090154	Ovis aries	57.39	5.00e-34	134.00
IUUC-Ptr-091372	Pan troglodytes	59.13	2.00e-34	136.00
IUUC-Pan-091694	Papio anubis	58.26	3.00e-34	135.00
IUUC-Psi-093576	Pelodiscus sinensis	60.38	5.00e-33	131.00
IUUC-Pma-094489	Petromyzon marinus	65.22	2.00e-39	152.00
IUUC-Pfo-097503	Poecilia formosa	62.28	7.00e-37	144.00
IUUC-Pab-098040	Pongo abelii	59.65	6.00e-36	140.00
IUUC-Pca-100621	Procavia capensis	58.26	4.00e-34	135.00
IUUC-Pva-102563	Pteropus vampyrus	57.39	2.00e-33	133.00
IUUC-Rno-104943	Rattus norvegicus	59.65	6.00e-36	140.00
IUUC-Sha-107561	Sarcophilus harrisii	57.14	1.00e-30	124.00
IUUC-Sar-113048	Sorex araneus	59.09	5.00e-25	103.00
IUUC-Ssc-115937	Sus scrofa	59.65	2.00e-36	142.00
IUUC-Tgu-117120	Taeniopygia guttata	59.13	2.00e-34	135.00
IUUC-Tru-118140	Takifugu rubripes	60.00	4.00e-36	141.00
IUUC-Tsy-118793	Tarsius syrichta	58.49	6.00e-31	124.00
IUUC-Tni-120190	Tetraodon nigroviridis	64.04	2.00e-37	145.00
IUUC-Tbe-127594	Tupaia belangeri	58.49	9.00e-31	123.00
IUUC-Ttr-128932	Tursiops truncatus	57.39	5.00e-34	134.00
IUUC-Vpa-130194	Vicugna pacos	59.43	6.00e-33	130.00
IUUC-Xtr-132257	Xenopus tropicalis	60.53	9.00e-36	140.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence