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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018261
Ensembl Protein ID W07E6.4
UniProt Accession G5ECL3; G5ECL3_CAEEL
Genbank Protein ID AAA82164.1; CCD73645.1
Protein Name Pre-RNA processing 21; Yeast PRP (Splicing factor) related
Genbank Nucleotide ID U09415; BX284602
Gene Name prp-21; Ceprp21; CELE_W07E6.4; W07E6.4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00004188 W07E6.4 W07E6.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDiRefIndexPINA
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UDP/UBQ/UBQ_Other 3.30e-07 30.4 585 651
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UDP/UBQ/UBQ_Other
   S: 9    dgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksg 75
           dgs+ ++ +  +++ +eLK++i+++ g+p+ +q+L+ +G   +d+ + a y+l d++ i+l +k++g
   Q: 585  DGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERG 651
           6777777777888899*********************************************999887 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MTAVVSNREE DSMNNEPSLS GRAIIGLIYP PPDIRTIVDK TARFAAKNGV DFENKIREKE 60
AKNPKFNFLS ITDPYHAYYK KMVYDFSEGR VEAPKVPQAV KEHVKKAEFV PSAPPPAYEF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018261|ULD,UBQ_Other|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAAATGACTG CAGTTGTCTC AAACCGCGAG GAGGACTCGA TGAACAACGA GCCCTCGTTG 60
TCAGGGCGTG CGATTATTGG ATTAATCTAC CCGCCGCCGG ATATTCGCAG TAAGTTTTAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018261|ULD,UBQ_Other|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2
Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin
SMART

SM00648--SWAP
SM00213--UBQ
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome
KEGG cel:CELE_W07E6.4
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000319 Aegilops tauschii 31.70 3.00e-39 155.00
IUUC-Aml-002416 Ailuropoda melanoleuca 49.66 3.00e-81 295.00
IUUC-Atr-003001 Amborella trichopoda 34.90 2.00e-64 239.00
IUUC-Apl-003584 Anas platyrhynchos 51.46 2.00e-69 255.00
IUUC-Aca-004690 Anolis carolinensis 50.00 3.00e-75 275.00
IUUC-Aly-005487 Arabidopsis lyrata 33.70 3.00e-59 222.00
IUUC-Ath-007275 Arabidopsis thaliana 34.62 1.00e-61 229.00
IUUC-Acl-008320 Aspergillus clavatus 41.74 2.00e-39 155.00
IUUC-Afl-008707 Aspergillus flavus 42.37 4.00e-47 181.00
IUUC-Afu-008786 Aspergillus fumigatus 36.64 3.00e-39 155.00
IUUC-Ani-009307 Aspergillus nidulans 40.21 4.00e-43 167.00
IUUC-Ang-009761 Aspergillus niger 42.08 5.00e-46 177.00
IUUC-Aor-010067 Aspergillus oryzae 42.37 3.00e-47 181.00
IUUC-Ate-010515 Aspergillus terreus 38.54 2.00e-48 185.00
IUUC-Ame-011842 Astyanax mexicanus 48.63 2.00e-78 285.00
IUUC-Bgr-012204 Blumeria graminis 31.75 8.00e-54 203.00
IUUC-Bta-013525 Bos taurus 49.83 4.00e-80 291.00
IUUC-Bci-013842 Botrytis cinerea 42.23 2.00e-42 165.00
IUUC-Bdi-014436 Brachypodium distachyon 32.27 8.00e-59 220.00
IUUC-Bol-015186 Brassica oleracea 32.84 3.00e-39 155.00
IUUC-Bra-017856 Brassica rapa 30.62 3.00e-43 168.00
IUUC-Cja-018989 Callithrix jacchus 49.66 3.00e-81 295.00
IUUC-Cfa-020629 Canis familiaris 49.83 4.00e-80 291.00
IUUC-Cpo-021759 Cavia porcellus 49.32 2.00e-80 292.00
IUUC-Cre-022603 Chlamydomonas reinhardtii 59.68 5.00e-18 84.00
IUUC-Csa-023750 Chlorocebus sabaeus 49.66 2.00e-81 295.00
IUUC-Cho-024581 Choloepus hoffmanni 47.76 2.00e-66 246.00
IUUC-Cin-025640 Ciona intestinalis 50.53 9.00e-76 276.00
IUUC-Csv-025855 Ciona savignyi 50.53 7.00e-77 280.00
IUUC-Cgl-026573 Colletotrichum gloeosporioides 38.98 2.00e-41 162.00
IUUC-Cne-026952 Cryptococcus neoformans 37.85 1.00e-43 170.00
IUUC-Dre-028055 Danio rerio 53.68 4.00e-73 268.00
IUUC-Dno-029259 Dasypus novemcinctus 49.83 5.00e-80 291.00
IUUC-Dor-031081 Dipodomys ordii 49.32 2.00e-80 292.00
IUUC-Dse-031438 Dothistroma septosporum 29.38 1.00e-45 176.00
IUUC-Dme-031975 Drosophila melanogaster 39.39 7.00e-100 357.00
IUUC-Ete-033177 Echinops telfairi 50.00 7.00e-77 280.00
IUUC-Eca-033670 Equus caballus 49.66 5.00e-81 294.00
IUUC-Eeu-035100 Erinaceus europaeus 47.83 3.00e-56 211.00
IUUC-Fca-036176 Felis catus 49.83 4.00e-80 291.00
IUUC-Fal-036776 Ficedula albicollis 50.74 6.00e-67 247.00
IUUC-Fox-037706 Fusarium oxysporum 37.67 1.00e-41 162.00
IUUC-Fso-038313 Fusarium solani 34.02 1.00e-39 156.00
IUUC-Gmo-038887 Gadus morhua 50.35 2.00e-74 272.00
IUUC-Ggr-039932 Gaeumannomyces graminis 28.40 9.00e-35 140.00
IUUC-Gga-041184 Gallus gallus 51.84 1.00e-68 253.00
IUUC-Gac-042118 Gasterosteus aculeatus 51.03 3.00e-77 281.00
IUUC-Gma-042726 Glycine max 35.41 2.00e-69 256.00
IUUC-Ggo-045641 Gorilla gorilla 49.83 3.00e-80 291.00
IUUC-Hsa-045751 Homo sapiens 49.83 3.00e-80 291.00
IUUC-Hvu-047702 Hordeum vulgare 28.86 1.00e-22 100.00
IUUC-Itr-047960 Ictidomys tridecemlineatus 50.00 1.00e-81 296.00
IUUC-Kpa-049400 Komagataella pastoris 27.76 8.00e-30 123.00
IUUC-Lch-050152 Latimeria chalumnae 44.10 9.00e-106 376.00
IUUC-Lpe-051570 Leersia perrieri 32.45 1.00e-39 157.00
IUUC-Loc-051753 Lepisosteus oculatus 51.57 1.00e-80 293.00
IUUC-Lma-053219 Leptosphaeria maculans 35.47 2.00e-32 132.00
IUUC-Laf-053643 Loxodonta africana 49.66 3.00e-81 295.00
IUUC-Mcc-055091 Macaca mulatta 49.66 2.00e-81 295.00
IUUC-Meu-056036 Macropus eugenii 47.42 2.00e-72 266.00
IUUC-Mor-057214 Magnaporthe oryzae 36.64 1.00e-32 132.00
IUUC-Mpo-057385 Magnaporthe poae 46.67 2.00e-05 41.60
IUUC-Mtr-057954 Medicago truncatula 34.95 1.00e-67 250.00
IUUC-Mla-059020 Melampsora laricipopulina 35.01 8.00e-44 171.00
IUUC-Mga-060176 Meleagris gallopavo 51.46 2.00e-69 256.00
IUUC-Mvi-060278 Microbotryum violaceum 30.20 5.00e-76 277.00
IUUC-Mmr-061602 Microcebus murinus 43.73 2.00e-111 395.00
IUUC-Mdo-062047 Monodelphis domestica 49.48 2.00e-80 292.00
IUUC-Mmu-063377 Mus musculus 49.31 1.00e-80 293.00
IUUC-Mac-065644 Musa acuminata 36.73 1.00e-67 250.00
IUUC-Mpu-066047 Mustela putorius furo 49.66 3.00e-81 295.00
IUUC-Mlu-067039 Myotis lucifugus 50.00 1.00e-81 296.00
IUUC-Nfi-068434 Neosartorya fischeri 43.03 5.00e-46 177.00
IUUC-Ncr-068912 Neurospora crassa 28.05 2.00e-37 149.00
IUUC-Nle-069540 Nomascus leucogenys 49.66 2.00e-81 295.00
IUUC-Opr-071157 Ochotona princeps 49.83 4.00e-76 278.00
IUUC-Ont-072229 Oreochromis niloticus 50.34 6.00e-76 277.00
IUUC-Oan-073616 Ornithorhynchus anatinus 42.25 3.00e-08 50.40
IUUC-Ocu-074002 Oryctolagus cuniculus 49.66 1.00e-80 293.00
IUUC-Oba-075659 Oryza barthii 30.98 1.00e-26 113.00
IUUC-Obr-076465 Oryza brachyantha 31.32 7.00e-41 160.00
IUUC-Ogl-077461 Oryza glaberrima 33.53 1.00e-42 166.00
IUUC-Ogu-078515 Oryza glumaepatula 32.75 6.00e-43 167.00
IUUC-Oin-080201 Oryza indica 31.99 8.00e-41 160.00
IUUC-Olo-080751 Oryza longistaminata 30.95 1.00e-26 113.00
IUUC-Ome-081201 Oryza meridionalis 33.43 2.00e-42 166.00
IUUC-Oni-082951 Oryza nivara 31.99 9.00e-41 160.00
IUUC-Opu-083560 Oryza punctata 32.16 5.00e-42 164.00
IUUC-Oru-084440 Oryza rufipogon 33.43 2.00e-42 166.00
IUUC-Osa-085699 Oryza sativa 33.53 1.00e-42 166.00
IUUC-Ola-086705 Oryzias latipes 51.43 1.00e-75 276.00
IUUC-Olu-087794 Ostreococcus lucimarinus 35.64 3.00e-53 201.00
IUUC-Oga-088896 Otolemur garnettii 49.66 2.00e-81 295.00
IUUC-Oar-090155 Ovis aries 49.83 5.00e-80 291.00
IUUC-Ptr-090754 Pan troglodytes 49.83 3.00e-80 291.00
IUUC-Pan-092464 Papio anubis 49.66 2.00e-81 295.00
IUUC-Psi-093166 Pelodiscus sinensis 49.66 2.00e-71 261.00
IUUC-Pma-094280 Petromyzon marinus 52.08 5.00e-78 283.00
IUUC-Pno-095106 Phaeosphaeria nodorum 35.44 4.00e-27 114.00
IUUC-Ppa-095510 Physcomitrella patens 34.41 8.00e-60 224.00
IUUC-Pfo-096212 Poecilia formosa 43.71 2.00e-81 295.00
IUUC-Pab-098482 Pongo abelii 49.66 2.00e-81 295.00
IUUC-Pop-099479 Populus trichocarpa 33.47 1.00e-59 223.00
IUUC-Pca-100776 Procavia capensis 41.23 1.00e-21 97.40
IUUC-Ppe-101595 Prunus persica 33.68 2.00e-62 232.00
IUUC-Pva-102981 Pteropus vampyrus 48.69 1.00e-68 253.00
IUUC-Pgr-103503 Puccinia graminis 30.88 1.00e-56 213.00
IUUC-Ptt-103994 Puccinia triticina 31.95 8.00e-54 204.00
IUUC-Pte-104226 Pyrenophora teres 34.77 1.00e-32 133.00
IUUC-Pyt-104732 Pyrenophora triticirepentis 34.14 1.00e-34 139.00
IUUC-Rno-105225 Rattus norvegicus 50.00 2.00e-81 296.00
IUUC-Sce-106278 Saccharomyces cerevisiae 25.22 6.00e-11 60.10
IUUC-Sha-107353 Sarcophilus harrisii 50.18 1.00e-79 289.00
IUUC-Sja-107876 Schizosaccharomyces japonicus 30.75 4.00e-48 184.00
IUUC-Spo-108266 Schizosaccharomyces pombe 30.72 5.00e-48 184.00
IUUC-Ssl-108518 Sclerotinia sclerotiorum 42.52 5.00e-45 174.00
IUUC-Smo-109675 Selaginella moellendorffii 41.79 2.00e-45 176.00
IUUC-Sit-110019 Setaria italica 31.32 2.00e-39 156.00
IUUC-Sly-111653 Solanum lycopersicum 35.02 3.00e-64 238.00
IUUC-Stu-112579 Solanum tuberosum 36.03 2.00e-66 246.00
IUUC-Sar-113166 Sorex araneus 43.64 3.00e-63 235.00
IUUC-Sbi-114746 Sorghum bicolor 30.88 2.00e-39 156.00
IUUC-Sre-115196 Sporisorium reilianum 32.92 1.00e-47 183.00
IUUC-Ssc-115512 Sus scrofa 43.11 2.00e-107 382.00
IUUC-Tgu-117284 Taeniopygia guttata 51.46 2.00e-69 255.00
IUUC-Tru-118236 Takifugu rubripes 44.21 3.00e-105 374.00
IUUC-Tsy-119219 Tarsius syrichta 47.95 2.00e-74 272.00
IUUC-Tni-119929 Tetraodon nigroviridis 46.22 1.00e-55 209.00
IUUC-Tca-121156 Theobroma cacao 34.26 3.00e-64 238.00
IUUC-Tre-122179 Trichoderma reesei 30.20 3.00e-43 168.00
IUUC-Tvi-122326 Trichoderma virens 39.24 8.00e-46 176.00
IUUC-Tae-124313 Triticum aestivum 32.40 2.00e-56 212.00
IUUC-Tur-126352 Triticum urartu 30.92 5.00e-39 154.00
IUUC-Tme-126996 Tuber melanosporum 31.45 7.00e-52 196.00
IUUC-Tbe-127271 Tupaia belangeri 47.93 5.00e-74 271.00
IUUC-Ttr-128433 Tursiops truncatus 50.00 7.00e-80 290.00
IUUC-Uma-129357 Ustilago maydis 33.08 2.00e-50 192.00
IUUC-Vda-130010 Verticillium dahliae 39.78 5.00e-37 147.00
IUUC-Vvi-131734 Vitis vinifera 34.76 2.00e-65 242.00
IUUC-Xtr-132013 Xenopus tropicalis 42.32 4.00e-104 370.00
IUUC-Xma-134244 Xiphophorus maculatus 49.13 1.00e-74 273.00
IUUC-Yli-134579 Yarrowia lipolytica 36.07 1.00e-27 116.00
IUUC-Zma-135716 Zea mays 33.53 3.00e-39 155.00
Created Date 25-Jun-2017

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