iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115392

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU914695

Gene Name

POC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000011426.2	ENSSSCT00000012506.2	ENSSSCP00000012178.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-59	195.2	175	213
UBD/Beta-Prp	2.00e-82	277.0	47	262

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v+c +f +d +l+vs+sdD+t+k+WD ++  +++s
   Q: 175  HINWVRCAKFsPDgRLIVSASDDKTVKLWDKTSRECVHS 213
           999********999******************9999886 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           kg h + +tcv+fs + ++la+gs+d+++ vw +++++   ++ gh+++vt+v+fsp+g +l++gs+D+t+++w ++      ++++h+
   Q: 47   KG-HRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHT 134
           44.5557788****************************************************************5553334446888** PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           ++v+s++f+ +g+++v++s+d+ti+vw ++ ++ l   ls+h  +v+c++++pdg+l+vs+s+D+tv+lWd  + ++++   + h + v
   Q: 135  ATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLF-SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGFV 221
           ****************************99999999.********************************************99.***** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdn 224
           + ++f+++g++++++++d+tvk+wd++t + ++ ++ h++ 
   Q: 222  TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 262
           ***********************************999876 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

LGRSQPRHGI ALPGRVLALG KPFPYRAFTH LTMALPQEDP SLERHFKGHR DAVTCVDFSF 60
NMKQLASGSM DSCLMVWHMK PQSRAYRFTG HKDAVTCVNF SPSGHLLASG SRDKTVRIWV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGTGCTTG GCAACCCCTG CATAGGTTCT GAATGGCAGC CAGGGCTGAG AACTGCTGCT 60
CTGAAGCCCT GTCTGCATTG GCTGCTGGAA AGCTGTCTCT GCTGGAAATG ATTTCACCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0003431--P:growth plate cartilage chondrocyte development
GO:0007052--P:mitotic spindle organization
GO:1905515--P:non-motile cilium assembly
GO:0010825--P:positive regulation of centrosome duplication
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001513	Ailuropoda melanoleuca	93.53	0.00e+00	673.00
IUUC-Apl-003466	Anas platyrhynchos	84.18	3.00e-165	574.00
IUUC-Aca-004323	Anolis carolinensis	78.72	2.00e-160	558.00
IUUC-Bta-012484	Bos taurus	95.15	0.00e+00	660.00
IUUC-Cja-019067	Callithrix jacchus	90.61	0.00e+00	692.00
IUUC-Cfa-020439	Canis familiaris	91.37	0.00e+00	642.00
IUUC-Cpo-021403	Cavia porcellus	90.56	0.00e+00	653.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	57.77	2.00e-106	378.00
IUUC-Csa-023479	Chlorocebus sabaeus	93.29	1.00e-171	595.00
IUUC-Cho-024354	Choloepus hoffmanni	87.27	2.00e-113	401.00
IUUC-Cin-025258	Ciona intestinalis	72.73	3.00e-143	501.00
IUUC-Csv-025955	Ciona savignyi	69.07	4.00e-128	450.00
IUUC-Dno-029467	Dasypus novemcinctus	78.75	2.00e-126	444.00
IUUC-Dor-030399	Dipodomys ordii	90.15	0.00e+00	643.00
IUUC-Eca-034425	Equus caballus	91.60	0.00e+00	682.00
IUUC-Eeu-034607	Erinaceus europaeus	77.68	3.00e-153	534.00
IUUC-Fca-035627	Felis catus	93.64	0.00e+00	653.00
IUUC-Fal-037381	Ficedula albicollis	79.63	2.00e-160	558.00
IUUC-Gmo-038489	Gadus morhua	77.36	1.00e-143	502.00
IUUC-Gga-040559	Gallus gallus	79.57	2.00e-159	554.00
IUUC-Gac-041453	Gasterosteus aculeatus	70.21	4.00e-148	517.00
IUUC-Ggo-044773	Gorilla gorilla	92.26	0.00e+00	651.00
IUUC-Hsa-045823	Homo sapiens	92.86	0.00e+00	655.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	92.15	0.00e+00	657.00
IUUC-Lch-050558	Latimeria chalumnae	77.04	3.00e-156	544.00
IUUC-Loc-052836	Lepisosteus oculatus	78.15	1.00e-161	562.00
IUUC-Laf-053974	Loxodonta africana	80.71	4.00e-155	540.00
IUUC-Mcc-055494	Macaca mulatta	90.72	0.00e+00	658.00
IUUC-Meu-056646	Macropus eugenii	74.49	3.00e-128	451.00
IUUC-Mga-059295	Meleagris gallopavo	80.31	7.00e-158	550.00
IUUC-Mmr-061040	Microcebus murinus	94.05	0.00e+00	659.00
IUUC-Mdo-062519	Monodelphis domestica	82.46	6.00e-166	576.00
IUUC-Mmu-063759	Mus musculus	92.67	3.00e-171	594.00
IUUC-Mpu-066442	Mustela putorius furo	92.56	0.00e+00	649.00
IUUC-Mlu-068163	Myotis lucifugus	86.81	0.00e+00	649.00
IUUC-Nle-070160	Nomascus leucogenys	91.96	0.00e+00	652.00
IUUC-Opr-070192	Ochotona princeps	91.81	2.00e-166	577.00
IUUC-Ont-072539	Oreochromis niloticus	75.56	4.00e-150	524.00
IUUC-Oan-072834	Ornithorhynchus anatinus	61.92	4.00e-113	400.00
IUUC-Ocu-074624	Oryctolagus cuniculus	92.26	5.00e-168	583.00
IUUC-Ola-087268	Oryzias latipes	73.05	1.00e-143	502.00
IUUC-Oga-088964	Otolemur garnettii	94.93	0.00e+00	667.00
IUUC-Oar-090202	Ovis aries	93.50	0.00e+00	691.00
IUUC-Ptr-091164	Pan troglodytes	92.54	0.00e+00	656.00
IUUC-Pan-092805	Papio anubis	92.62	4.00e-170	590.00
IUUC-Psi-093359	Pelodiscus sinensis	77.34	2.00e-164	570.00
IUUC-Pma-094425	Petromyzon marinus	77.29	3.00e-152	531.00
IUUC-Pfo-096741	Poecilia formosa	73.99	5.00e-140	490.00
IUUC-Pab-098376	Pongo abelii	92.86	0.00e+00	657.00
IUUC-Pca-101122	Procavia capensis	88.96	5.00e-178	616.00
IUUC-Pva-103104	Pteropus vampyrus	81.54	2.00e-152	531.00
IUUC-Rno-105282	Rattus norvegicus	89.93	5.00e-163	566.00
IUUC-Sha-106840	Sarcophilus harrisii	80.83	8.00e-118	416.00
IUUC-Smo-109423	Selaginella moellendorffii	44.13	2.00e-78	285.00
IUUC-Tgu-117340	Taeniopygia guttata	77.91	5.00e-155	540.00
IUUC-Tru-117577	Takifugu rubripes	72.19	2.00e-137	482.00
IUUC-Tsy-119404	Tarsius syrichta	87.58	6.00e-175	606.00
IUUC-Tni-120713	Tetraodon nigroviridis	70.78	1.00e-136	479.00
IUUC-Tbe-127788	Tupaia belangeri	68.00	3.00e-116	411.00
IUUC-Ttr-128608	Tursiops truncatus	94.50	0.00e+00	647.00
IUUC-Xtr-132720	Xenopus tropicalis	74.92	2.00e-144	505.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence