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Tag Content
iUUCD ID IUUC-Aly-005535
Ensembl Protein ID fgenesh2_kg.6__3320__AT4G05410.1
UniProt Accession D7M2J2; D7M2J2_ARALL
Genbank Protein ID EFH51100.1
Protein Name Transducin family protein
Genbank Nucleotide ID GL348718
Gene Name YAO; ARALYDRAFT_490186
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.6__3320__AT4G05410.1 fgenesh2_kg.6__3320__AT4G05410.1 fgenesh2_kg.6__3320__AT4G05410.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-24 86.1 261 293
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH + v+cl+f   +  + sGs D ++kvW++ 
   Q: 261  GHRNTVSCLCFryGTSEVYSGSFDRNVKVWNVE 293
           8**********973368**************85 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MKYNSEKKKS GGSKRGGKKG SNERDPFFEE EPKKRRKVSY DDDDIESIDS DAEENGFTGG 60
DEDGRRVDVE VVEEDEFADE TVGEKKKRLT EDMLNRLREA KRREREEAGD DDDDEDDDES 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-005535|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGTTTTTCAG CTTCTTCCGT CGCCACTAAA CCCTGAGGCT AAACCTAGAC GAGTCAAAGT 60
GCAATAAACG TTAAACCCTA AGAAGAGAGA GAGAGAGAGA AGAATGAAGT ACAACAGCGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-005535|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005730--C:nucleolus
GO:0060321--P:acceptance of pollen
GO:0009793--P:embryo development ending in seed dormancy
GO:0009553--P:embryo sac development
KEGG aly:ARALYDRAFT_490186
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000586 Aegilops tauschii 50.77 2.00e-109 388.00
IUUC-Aml-002072 Ailuropoda melanoleuca 38.56 2.00e-70 258.00
IUUC-Apl-003264 Anas platyrhynchos 38.96 3.00e-70 258.00
IUUC-Aca-004898 Anolis carolinensis 40.27 4.00e-75 274.00
IUUC-Ath-007003 Arabidopsis thaliana 89.09 0.00e+00 725.00
IUUC-Ame-011860 Astyanax mexicanus 38.50 6.00e-73 267.00
IUUC-Bta-012698 Bos taurus 39.14 4.00e-71 261.00
IUUC-Bci-013973 Botrytis cinerea 28.15 3.00e-39 155.00
IUUC-Bdi-014790 Brachypodium distachyon 53.59 5.00e-121 427.00
IUUC-Bol-016068 Brassica oleracea 75.36 0.00e+00 657.00
IUUC-Bra-017410 Brassica rapa 82.51 2.00e-178 618.00
IUUC-Cel-018616 Caenorhabditis elegans 32.23 3.00e-43 169.00
IUUC-Cja-019532 Callithrix jacchus 38.77 2.00e-71 262.00
IUUC-Cfa-020961 Canis familiaris 36.23 5.00e-67 247.00
IUUC-Cpo-021527 Cavia porcellus 38.54 4.00e-68 251.00
IUUC-Csa-023106 Chlorocebus sabaeus 38.50 6.00e-71 260.00
IUUC-Cin-025670 Ciona intestinalis 33.57 1.00e-65 243.00
IUUC-Csv-026172 Ciona savignyi 34.75 2.00e-65 242.00
IUUC-Cgl-026619 Colletotrichum gloeosporioides 33.23 5.00e-40 158.00
IUUC-Cme-027125 Cyanidioschyzon merolae 26.32 3.00e-29 122.00
IUUC-Dno-029684 Dasypus novemcinctus 34.77 5.00e-49 187.00
IUUC-Eca-033735 Equus caballus 38.87 3.00e-70 258.00
IUUC-Fca-036193 Felis catus 38.83 4.00e-70 258.00
IUUC-Fal-037058 Ficedula albicollis 38.24 3.00e-71 261.00
IUUC-Fox-038036 Fusarium oxysporum 33.14 8.00e-45 174.00
IUUC-Gmo-038796 Gadus morhua 37.80 2.00e-59 222.00
IUUC-Gga-040743 Gallus gallus 40.35 2.00e-60 224.00
IUUC-Gma-042659 Glycine max 55.89 3.00e-139 488.00
IUUC-Ggo-045543 Gorilla gorilla 38.50 7.00e-72 263.00
IUUC-Hsa-047017 Homo sapiens 38.24 6.00e-71 260.00
IUUC-Hvu-047173 Hordeum vulgare 55.41 7.00e-126 442.00
IUUC-Itr-048062 Ictidomys tridecemlineatus 37.97 1.00e-69 256.00
IUUC-Lch-050566 Latimeria chalumnae 39.72 6.00e-68 251.00
IUUC-Lpe-051651 Leersia perrieri 55.04 1.00e-123 435.00
IUUC-Laf-054105 Loxodonta africana 37.70 4.00e-69 254.00
IUUC-Mcc-055215 Macaca mulatta 38.24 9.00e-71 260.00
IUUC-Meu-055943 Macropus eugenii 37.70 6.00e-69 254.00
IUUC-Mtr-058209 Medicago truncatula 59.45 3.00e-139 488.00
IUUC-Mla-059043 Melampsora laricipopulina 26.89 1.00e-33 137.00
IUUC-Mga-060024 Meleagris gallopavo 39.12 8.00e-67 246.00
IUUC-Mmr-061403 Microcebus murinus 37.43 1.00e-68 253.00
IUUC-Mdo-063026 Monodelphis domestica 38.24 7.00e-72 263.00
IUUC-Mmu-063646 Mus musculus 37.96 8.00e-70 257.00
IUUC-Mac-064801 Musa acuminata 58.99 7.00e-134 469.00
IUUC-Mpu-065760 Mustela putorius furo 38.61 5.00e-70 257.00
IUUC-Mlu-067963 Myotis lucifugus 37.77 2.00e-69 255.00
IUUC-Ncr-068679 Neurospora crassa 32.94 4.00e-35 142.00
IUUC-Nle-069766 Nomascus leucogenys 40.74 1.00e-58 219.00
IUUC-Opr-070906 Ochotona princeps 37.97 4.00e-70 258.00
IUUC-Ocu-074263 Oryctolagus cuniculus 38.30 2.00e-70 259.00
IUUC-Oba-075607 Oryza barthii 55.71 4.00e-113 400.00
IUUC-Obr-076581 Oryza brachyantha 50.00 1.00e-44 172.00
IUUC-Ogl-077387 Oryza glaberrima 55.81 9.00e-123 433.00
IUUC-Ogu-078323 Oryza glumaepatula 55.99 4.00e-120 424.00
IUUC-Oin-079977 Oryza indica 49.27 2.00e-90 325.00
IUUC-Olo-080857 Oryza longistaminata 55.30 2.00e-119 422.00
IUUC-Ome-081568 Oryza meridionalis 55.56 8.00e-120 423.00
IUUC-Oni-082685 Oryza nivara 55.73 1.00e-124 439.00
IUUC-Opu-084049 Oryza punctata 56.25 2.00e-120 425.00
IUUC-Oru-084348 Oryza rufipogon 55.73 1.00e-124 439.00
IUUC-Osa-086076 Oryza sativa 55.73 1.00e-124 439.00
IUUC-Ola-086991 Oryzias latipes 38.16 8.00e-71 260.00
IUUC-Oga-088991 Otolemur garnettii 37.17 2.00e-68 252.00
IUUC-Oar-090430 Ovis aries 39.04 1.00e-70 259.00
IUUC-Ptr-091359 Pan troglodytes 38.77 1.00e-71 263.00
IUUC-Pan-092499 Papio anubis 37.97 3.00e-70 258.00
IUUC-Pma-094447 Petromyzon marinus 33.14 3.00e-47 181.00
IUUC-Pfo-096430 Poecilia formosa 37.89 3.00e-71 261.00
IUUC-Pab-097649 Pongo abelii 38.50 2.00e-71 262.00
IUUC-Pop-100037 Populus trichocarpa 64.94 7.00e-148 516.00
IUUC-Pca-100317 Procavia capensis 40.65 3.00e-28 119.00
IUUC-Ppe-101999 Prunus persica 65.06 8.00e-154 536.00
IUUC-Pva-103046 Pteropus vampyrus 38.77 2.00e-70 259.00
IUUC-Pgr-103655 Puccinia graminis 30.03 1.00e-30 127.00
IUUC-Ptt-103812 Puccinia triticina 26.55 2.00e-24 106.00
IUUC-Rno-104973 Rattus norvegicus 37.70 5.00e-70 257.00
IUUC-Sce-106329 Saccharomyces cerevisiae 27.11 4.00e-29 122.00
IUUC-Sha-106941 Sarcophilus harrisii 38.50 1.00e-71 263.00
IUUC-Sja-107821 Schizosaccharomyces japonicus 27.87 2.00e-42 166.00
IUUC-Ssl-108552 Sclerotinia sclerotiorum 28.02 3.00e-40 159.00
IUUC-Sit-109694 Setaria italica 56.36 2.00e-128 451.00
IUUC-Sly-111294 Solanum lycopersicum 58.91 7.00e-140 489.00
IUUC-Stu-112747 Solanum tuberosum 59.43 2.00e-141 495.00
IUUC-Sbi-114694 Sorghum bicolor 56.92 1.00e-132 465.00
IUUC-Sre-114937 Sporisorium reilianum 27.15 3.00e-43 169.00
IUUC-Ssc-116127 Sus scrofa 38.56 4.00e-70 258.00
IUUC-Tgu-117242 Taeniopygia guttata 37.01 1.00e-46 179.00
IUUC-Tca-121724 Theobroma cacao 57.23 3.00e-142 498.00
IUUC-Tre-122106 Trichoderma reesei 30.95 5.00e-41 161.00
IUUC-Tvi-122526 Trichoderma virens 30.92 6.00e-40 158.00
IUUC-Tae-122939 Triticum aestivum 54.64 4.00e-125 440.00
IUUC-Tur-126548 Triticum urartu 54.64 9.00e-125 439.00
IUUC-Tbe-127923 Tupaia belangeri 38.34 1.00e-69 256.00
IUUC-Ttr-129308 Tursiops truncatus 35.90 4.00e-61 228.00
IUUC-Uma-129472 Ustilago maydis 27.38 2.00e-38 153.00
IUUC-Vda-129910 Verticillium dahliae 32.01 2.00e-43 169.00
IUUC-Vvi-131683 Vitis vinifera 63.04 8.00e-151 526.00
IUUC-Xtr-132118 Xenopus tropicalis 37.14 6.00e-69 254.00
IUUC-Yli-134639 Yarrowia lipolytica 26.27 8.00e-34 137.00
Created Date 25-Jun-2017

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