iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126408

Ensembl Protein ID

TRIUR3_27301-P1

UniProt Accession

M8AS36; M8AS36_TRIUA

Genbank Protein ID

EMS67995.1

Protein Name

E3 ubiquitin ligase RNF4

Genbank Nucleotide ID

KD012289

Gene Name

TRIUR3_27301

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_27301	TRIUR3_27301-T1	TRIUR3_27301-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-06	29.4	204	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++++ +   ++ CgH+f+++C+++        + + +CP+Cr
   Q: 204  CPVCMNELVN-ASSTICGHIFCQKCIKAS------IQAQKKCPTCR 242
           ********88.66677**********888......**********8 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MSSAGSARVP KRRRTTKTSE AADRQLRERQ FLDLNLFPAV EVASTGGSLS INEPVSRTQP 60
PPTAAALLYE TTQVVVSSAA AGSNIGMNSF PINVEVIDDD VAIYTSGPPP QARQQSFRTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCTCTG CTGGTTCTGC AAGGGTTCCA AAGAGGAGAC GGACTACCAA GACGTCGGAG 60
GCTGCAGACC GGCAACTTCG GGAGCGACAG TTTCTGGACC TGAACTTGTT TCCAGCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	96.54	2.00e-134	470.00
IUUC-Aml-002206	Ailuropoda melanoleuca	40.00	9.00e-11	58.90
IUUC-Atr-002771	Amborella trichopoda	30.56	4.00e-22	97.10
IUUC-Apl-004120	Anas platyrhynchos	42.62	2.00e-12	64.30
IUUC-Aca-004236	Anolis carolinensis	30.85	7.00e-12	62.40
IUUC-Aly-005728	Arabidopsis lyrata	48.24	8.00e-18	82.40
IUUC-Ath-007366	Arabidopsis thaliana	50.59	3.00e-19	87.00
IUUC-Bta-012913	Bos taurus	41.67	2.00e-11	60.80
IUUC-Bdi-014655	Brachypodium distachyon	67.56	3.00e-71	260.00
IUUC-Bol-015129	Brassica oleracea	33.33	1.00e-17	82.00
IUUC-Cja-019151	Callithrix jacchus	40.00	1.00e-10	58.90
IUUC-Cfa-020868	Canis familiaris	37.70	2.00e-10	57.80
IUUC-Cpo-022249	Cavia porcellus	40.00	7.00e-11	59.30
IUUC-Csa-024125	Chlorocebus sabaeus	39.34	7.00e-11	59.30
IUUC-Cin-025749	Ciona intestinalis	41.46	3.00e-15	73.90
IUUC-Csv-026318	Ciona savignyi	42.67	1.00e-12	65.50
IUUC-Dre-028145	Danio rerio	44.26	4.00e-12	63.20
IUUC-Dno-029605	Dasypus novemcinctus	39.34	7.00e-11	59.30
IUUC-Dor-030898	Dipodomys ordii	40.00	4.00e-11	60.50
IUUC-Dme-032177	Drosophila melanogaster	35.71	4.00e-15	74.30
IUUC-Ete-032694	Echinops telfairi	39.34	2.00e-11	60.80
IUUC-Eca-033443	Equus caballus	39.34	8.00e-11	58.90
IUUC-Eeu-034603	Erinaceus europaeus	40.00	1.00e-10	57.40
IUUC-Fca-035507	Felis catus	39.34	8.00e-11	58.90
IUUC-Fal-037382	Ficedula albicollis	42.62	3.00e-12	63.90
IUUC-Gga-040493	Gallus gallus	42.62	2.00e-12	64.70
IUUC-Gma-043026	Glycine max	55.56	8.00e-20	89.40
IUUC-Ggo-044726	Gorilla gorilla	39.34	8.00e-11	59.30
IUUC-Hsa-046212	Homo sapiens	39.34	8.00e-11	59.30
IUUC-Hvu-047630	Hordeum vulgare	91.15	1.00e-139	487.00
IUUC-Itr-047892	Ictidomys tridecemlineatus	39.34	7.00e-11	59.30
IUUC-Lpe-050920	Leersia perrieri	55.69	1.00e-55	208.00
IUUC-Loc-051907	Lepisosteus oculatus	40.98	9.00e-12	62.00
IUUC-Laf-054145	Loxodonta africana	40.00	7.00e-11	59.30
IUUC-Mcc-055689	Macaca mulatta	39.34	8.00e-11	59.30
IUUC-Mtr-058638	Medicago truncatula	44.55	1.00e-18	85.50
IUUC-Mga-059303	Meleagris gallopavo	42.62	2.00e-12	64.70
IUUC-Mmr-061355	Microcebus murinus	39.34	8.00e-11	59.30
IUUC-Mmu-064421	Mus musculus	39.34	4.00e-11	60.10
IUUC-Mac-064604	Musa acuminata	50.00	6.00e-41	159.00
IUUC-Mpu-066522	Mustela putorius furo	39.34	8.00e-11	59.30
IUUC-Mlu-067065	Myotis lucifugus	39.34	4.00e-11	60.10
IUUC-Ncr-068628	Neurospora crassa	32.93	4.00e-11	61.60
IUUC-Nle-069768	Nomascus leucogenys	40.00	5.00e-11	59.70
IUUC-Opr-071141	Ochotona princeps	39.34	1.00e-11	62.00
IUUC-Ocu-073787	Oryctolagus cuniculus	39.34	6.00e-11	59.70
IUUC-Oba-075460	Oryza barthii	53.93	7.00e-59	219.00
IUUC-Obr-076349	Oryza brachyantha	54.75	6.00e-52	196.00
IUUC-Ogl-077094	Oryza glaberrima	53.99	1.00e-58	218.00
IUUC-Ogu-078677	Oryza glumaepatula	56.55	2.00e-63	234.00
IUUC-Oin-079992	Oryza indica	53.99	1.00e-58	218.00
IUUC-Olo-080257	Oryza longistaminata	53.18	2.00e-58	218.00
IUUC-Ome-081943	Oryza meridionalis	53.99	2.00e-58	218.00
IUUC-Oni-082671	Oryza nivara	53.93	7.00e-59	219.00
IUUC-Opu-083644	Oryza punctata	52.75	8.00e-56	209.00
IUUC-Oru-084650	Oryza rufipogon	53.56	7.00e-59	219.00
IUUC-Osa-086110	Oryza sativa	53.61	8.00e-59	219.00
IUUC-Ola-086970	Oryzias latipes	40.98	6.00e-12	62.80
IUUC-Olu-087634	Ostreococcus lucimarinus	50.00	1.00e-14	71.60
IUUC-Oga-088242	Otolemur garnettii	40.00	7.00e-11	59.30
IUUC-Oar-089469	Ovis aries	40.00	2.00e-11	61.60
IUUC-Pan-092776	Papio anubis	39.34	8.00e-11	59.30
IUUC-Psi-093929	Pelodiscus sinensis	41.67	8.00e-12	62.40
IUUC-Pma-094118	Petromyzon marinus	43.42	3.00e-14	68.60
IUUC-Ppa-095718	Physcomitrella patens	61.02	3.00e-21	94.00
IUUC-Pfo-097412	Poecilia formosa	36.59	6.00e-12	62.80
IUUC-Pab-098424	Pongo abelii	39.34	8.00e-11	59.30
IUUC-Ppe-102052	Prunus persica	37.06	4.00e-22	96.70
IUUC-Rno-105460	Rattus norvegicus	39.34	8.00e-11	59.30
IUUC-Sja-107948	Schizosaccharomyces japonicus	37.50	3.00e-09	55.50
IUUC-Smo-108908	Selaginella moellendorffii	54.39	6.00e-17	79.30
IUUC-Sit-109959	Setaria italica	55.47	8.00e-40	156.00
IUUC-Stu-112694	Solanum tuberosum	41.18	9.00e-25	105.00
IUUC-Sar-113601	Sorex araneus	39.34	9.00e-11	58.90
IUUC-Sbi-114398	Sorghum bicolor	58.80	2.00e-38	151.00
IUUC-Ssc-115911	Sus scrofa	39.34	8.00e-11	58.90
IUUC-Tgu-117264	Taeniopygia guttata	42.62	3.00e-12	63.90
IUUC-Tsy-118883	Tarsius syrichta	40.00	7.00e-11	58.50
IUUC-Tca-121320	Theobroma cacao	37.72	4.00e-15	73.60
IUUC-Tae-124035	Triticum aestivum	99.23	6.00e-152	528.00
IUUC-Ttr-128950	Tursiops truncatus	40.00	9.00e-11	59.30
IUUC-Vvi-131506	Vitis vinifera	31.68	2.00e-22	97.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence