iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053607

Ensembl Protein ID

ENSLAFP00000009312.3

UniProt Accession

G3T6X4; G3T6X4_LOXAF

Protein Name

Uncharacterized protein

Gene Name

TNRC6C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000011122.3	ENSLAFT00000030474.1	ENSLAFP00000026454.1
ENSLAFG00000011122.3	ENSLAFT00000011128.3	ENSLAFP00000009312.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	42.28	7.00e-31	134.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Loxodonta africana

Protein Sequence
(Fasta)

QAADQKTKVP EPTKTCPSQP QPAGTSTGTS TSTVSSSSNG KRASASGQQP AASRYLPREV 60
PPRFRQQEQK QLLKRGQPLP TGTLTSVSPA QGAGPAGVSP PPLSGAGVQH HPSKLQPDLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGCTGCTG ATCAAAAAAC CAAAGGTAAG TTTATTTATA TTTGTGGGGG GCTACATTTT 60
AGGACAGATC AAACTGTTTA TGATGAAGAT GACTAAGTTT TTAATTGATG GTTAAAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	40.65	0.00e+00	804.00
IUUC-Apl-003191	Anas platyrhynchos	83.88	0.00e+00	2347.00
IUUC-Aca-004717	Anolis carolinensis	83.65	0.00e+00	2452.00
IUUC-Ame-010681	Astyanax mexicanus	50.26	0.00e+00	796.00
IUUC-Bta-012915	Bos taurus	37.04	1.00e-119	425.00
IUUC-Cja-019614	Callithrix jacchus	89.31	0.00e+00	2189.00
IUUC-Cfa-020452	Canis familiaris	37.41	2.00e-129	457.00
IUUC-Cpo-021452	Cavia porcellus	88.32	0.00e+00	2331.00
IUUC-Csa-023169	Chlorocebus sabaeus	40.97	0.00e+00	802.00
IUUC-Cho-024655	Choloepus hoffmanni	41.09	9.00e-120	425.00
IUUC-Dre-028059	Danio rerio	55.85	0.00e+00	1039.00
IUUC-Dno-029734	Dasypus novemcinctus	40.18	0.00e+00	789.00
IUUC-Dor-030671	Dipodomys ordii	43.27	0.00e+00	663.00
IUUC-Dme-032014	Drosophila melanogaster	39.04	2.00e-30	128.00
IUUC-Ete-032774	Echinops telfairi	83.29	0.00e+00	1469.00
IUUC-Eca-033866	Equus caballus	89.85	0.00e+00	2213.00
IUUC-Eeu-034572	Erinaceus europaeus	61.68	1.00e-39	159.00
IUUC-Fal-036856	Ficedula albicollis	82.90	0.00e+00	1991.00
IUUC-Gga-040531	Gallus gallus	87.03	0.00e+00	2370.00
IUUC-Gac-041681	Gasterosteus aculeatus	51.57	0.00e+00	867.00
IUUC-Ggo-045143	Gorilla gorilla	89.19	0.00e+00	2223.00
IUUC-Hsa-045913	Homo sapiens	90.41	0.00e+00	2209.00
IUUC-Lch-049619	Latimeria chalumnae	42.00	0.00e+00	889.00
IUUC-Loc-052289	Lepisosteus oculatus	69.22	0.00e+00	1028.00
IUUC-Mcc-055342	Macaca mulatta	90.34	0.00e+00	2167.00
IUUC-Meu-056275	Macropus eugenii	47.38	4.00e-95	343.00
IUUC-Mga-059241	Meleagris gallopavo	40.44	4.00e-154	540.00
IUUC-Mmr-061348	Microcebus murinus	37.52	2.00e-127	451.00
IUUC-Mdo-062155	Monodelphis domestica	84.84	0.00e+00	2499.00
IUUC-Mmu-064259	Mus musculus	43.69	0.00e+00	723.00
IUUC-Mpu-066534	Mustela putorius furo	49.00	2.00e-79	291.00
IUUC-Mlu-067834	Myotis lucifugus	40.05	0.00e+00	817.00
IUUC-Nle-069168	Nomascus leucogenys	40.66	0.00e+00	783.00
IUUC-Opr-070976	Ochotona princeps	41.07	1.00e-68	255.00
IUUC-Ocu-074534	Oryctolagus cuniculus	74.09	0.00e+00	937.00
IUUC-Oga-088116	Otolemur garnettii	40.73	0.00e+00	815.00
IUUC-Oar-090041	Ovis aries	36.51	7.00e-107	382.00
IUUC-Ptr-091135	Pan troglodytes	88.62	0.00e+00	2161.00
IUUC-Pan-092665	Papio anubis	88.73	0.00e+00	2150.00
IUUC-Psi-093057	Pelodiscus sinensis	85.21	0.00e+00	2156.00
IUUC-Pma-094508	Petromyzon marinus	48.44	1.00e-54	207.00
IUUC-Pfo-097115	Poecilia formosa	51.98	1.00e-178	620.00
IUUC-Pab-097935	Pongo abelii	40.84	0.00e+00	806.00
IUUC-Pca-100481	Procavia capensis	82.20	0.00e+00	1010.00
IUUC-Pva-102376	Pteropus vampyrus	42.18	2.00e-67	251.00
IUUC-Rno-105508	Rattus norvegicus	37.75	2.00e-124	441.00
IUUC-Sar-113036	Sorex araneus	60.48	9.00e-41	163.00
IUUC-Sbi-114163	Sorghum bicolor	30.88	5.40e-01	29.60
IUUC-Ssc-115574	Sus scrofa	71.37	0.00e+00	1501.00
IUUC-Tgu-117233	Taeniopygia guttata	87.21	0.00e+00	2138.00
IUUC-Tru-117725	Takifugu rubripes	54.03	0.00e+00	947.00
IUUC-Tsy-118786	Tarsius syrichta	41.29	1.00e-62	236.00
IUUC-Tbe-127989	Tupaia belangeri	81.88	0.00e+00	873.00
IUUC-Ttr-128518	Tursiops truncatus	90.44	0.00e+00	2342.00
IUUC-Vpa-130230	Vicugna pacos	43.32	8.00e-74	273.00
IUUC-Xtr-132265	Xenopus tropicalis	73.50	0.00e+00	1782.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence